You are here

Home

ATCC10864_002540-T1, ATCC10864_002540-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002540-T1
Unique NameATCC10864_002540-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:126625..127498-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002540-T1 ID=ATCC10864_002540-T1|Name=ATCC10864_002540-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=874bp|location=Sequence derived from alignment at MCQH01000053:126625..127498- (Aspergillus niger ATCC 10864)
ATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGT
ACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGGTC
AGTTGATGGGCAGTGTAGTAGTGTACAAGGCTTTGGATATTGCCGGAAGC
CGAGGATATAAGAATTGCTTCATCTCTCAGTGGCCATTCTCTGCATTGCC
TCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAA
AGATCGAATAAGCGCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCC
CTATCGAATCGCATTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAA
GAAGATCAAGATGCAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCAC
AGGCGTCGACCGCCGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCC
CATCGCTTTTTGGTTTGCCCTTCCTATTCCAAGACTAGTTACTTTCTGCA
AATAGTCGGCATGAGGCATGAGAGCTTTCTGTTCTCACAAGCTGGCATCG
GACTGGGGTTGGCAGCTAACCTAGTCAGCATGCAGACACTGTGTAATTAT
GGCCGTGTGCCTCTGCTTATTGTCAGATTAAGCGTCCCGACGCTCGTCTG
GATGAGCATAAGGGCTGCCGGCTGTTTCCCGGGAACTACTAGCGCCTGGT
AAGTTGTCTGGAATGGATATGCGAAAACAAGGCCAATGGTCGTTCAGGTA
CACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTGTAT
GGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTTCGT
GCCAAGTCCCAAGCTGTGGGCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:126625..127498-

>ATCC10864_002540-T1 ID=ATCC10864_002540-T1|Name=ATCC10864_002540-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2796bp|location=Sequence derived from alignment at MCQH01000053:126625..127498- (Aspergillus niger ATCC 10864)
GTACACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTG
TATGGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTT
CGTGCCAAGTCCCAAGCTGTGGGCTGATCGGCATGAGGCATGAGAGCTTT
CTGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAG
CATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGAT
TAAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTC
CCGGGAACTACTAGCGCCTGTGGCCATTCTCTGCATTGCCTCTGGTGGTG
CAGCTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAAAGATCGAATA
AGCGCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCCCTATCGAATC
GCATTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAAGAAGATCAAG
ATGCAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCACAGGCGTCGAC
CGCCGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCCCATCGCTTTT
TGATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCC
GTACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGG
TACACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTGT
ATGGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTTC
GTGCCAAGTCCCAAGCTGTGGGCTGATCGGCATGAGGCATGAGAGCTTTC
TGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAGC
ATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGATT
AAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTCC
CGGGAACTACTAGCGCCTGTGGCCATTCTCTGCATTGCCTCTGGTGGTGC
AGCTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAAAGATCGAATAA
GCGCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCCCTATCGAATCG
CATTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAAGAAGATCAAGA
TGCAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCACAGGCGTCGACC
GCCGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCCCATCGCTTTTT
GATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCG
TACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGGT
ACACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTGTA
TGGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTTCG
TGCCAAGTCCCAAGCTGTGGGCTGATCGGCATGAGGCATGAGAGCTTTCT
GTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAGCA
TGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGATTA
AGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTCCC
GGGAACTACTAGCGCCTGTGGCCATTCTCTGCATTGCCTCTGGTGGTGCA
GCTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAAAGATCGAATAAG
CGCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCCCTATCGAATCGC
ATTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAAGAAGATCAAGAT
GCAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCACAGGCGTCGACCG
CCGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCCCATCGCTTTTTG
ATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGT
ACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGGTA
CACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTGTAT
GGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTTCGT
GCCAAGTCCCAAGCTGTGGGCTGATCGGCATGAGGCATGAGAGCTTTCTG
TTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAGCAT
GCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGATTAA
GCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTCCCG
GGAACTACTAGCGCCTGTGGCCATTCTCTGCATTGCCTCTGGTGGTGCAG
CTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAAAGATCGAATAAGC
GCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCCCTATCGAATCGCA
TTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAAGAAGATCAAGATG
CAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCACAGGCGTCGACCGC
CGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCCCATCGCTTTTTGA
TGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGTA
CTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002540ATCC10864_002540Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002540-T1ATCC10864_002540-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002540-T1.cdsATCC10864_002540-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002540-T1.exon4ATCC10864_002540-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002540-T1.exon3ATCC10864_002540-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002540-T1.exon2ATCC10864_002540-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002540-T1.exon1ATCC10864_002540-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR005828
Properties
Property NameValue
NoteantiSMASH:Cluster_1000053.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:126625..127498 -
Powered by Drupal