You are here

Home

ATCC10864_002543-T1, ATCC10864_002543-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002543-T1
Unique NameATCC10864_002543-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:138630..140240-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002543-T1 ID=ATCC10864_002543-T1|Name=ATCC10864_002543-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1611bp|location=Sequence derived from alignment at MCQH01000053:138630..140240- (Aspergillus niger ATCC 10864)
ATGTCTTCCTTCCAAATCTACCGAGCAGCTCTGCTGCTCTCTATCCTTGC
CACTGCCAATGCTCAGCAGGTTGGCACCTACACCACTGAGACACATCCGT
CTCTGACCTGGCAAACCTGCACCAGCGATGGCAGCTGCACTACCAACGAC
GGCGAGGTGGTCATCGACGCCAATTGGCGTTGGGTGCACTCAACCTCCAG
TGCCACCAACTGCTATACTGGCAACGAATGGGACACCTCAATCTGTACCG
ACGATGTGACCTGCGCCGCGAACTGCGCGCTTGACGGTGCCACTTACGAG
GCGACCTATGGTGTGACCACGTCCGGCAGCGAGCTGCGCCTGAACTTCGT
CACTCAAGGCTCCAGCAAGAACATCGGGTCTCGTTTGTACCTCATGAGCG
ACGACAGCAACTATGAGCTGTTCAAGCTCCTCGGCCAGGAGTTCACCTTT
GATGTCGACGTGTCCAACCTTCCCTGCGGTCTCAACGGCGCGCTCTACTT
CGTCGCCATGGACGCTGACGGTGGCACCTCGGAGTATTCCGGCAACAAGG
CCGGTGCCAAATACGGAACCGGCTACTGCGACTCGCAGTGCCCTCGCGAC
CTGAAGTTCATCAACGGCGAAGCCAACTGCGACGGCTGGGAGCCGTCCAG
CAACAACGTCAACACCGGAGTTGGCGACCACGGCTCCTGCTGCGCCGAGA
TGGACGTCTGGGAAGCGAACAGCATCTCCAACGCCTTCACCGCGCACCCC
TGCGACTCCGTCAGCCAGACAATGTGCGACGGTGACTCCTGTGGTGGAAC
TTACAGCGCCAGCGGCGACCGCTACAGCGGCACCTGCGACCCCGACGGCT
GCGACTACAACCCCTACCGTCTAGGCAACACGGACTTTTACGGCCCCGGC
CTGACCGTCGACACGAACAGCCCCTTCACCGTCGTCACCCAGTTCATCAC
CGATGACGGCACCTCCTCCGGCACCTTGACCGAGATCAAGCGGTTGTACG
TGCAGAACGGCGAGGTCATCGCCAACGGCGCCTCCACCTACTCCAGTGTC
AACGGCAGCTCTATCACCTCCGCTTTCTGTGAATCAGAGAAGACGCTGTT
CGGCGACGAGAATGTCTTCGACAAGCACGGCGGTCTCGAGGGCATGGGCG
AGGCTATGGCCAAGGGCATGGTCTTGGTCTTGAGTCTTTGGGATGACTAT
GCCGCTGACATGCTCTGGCTCGACAGCGACTACCCCGTTAACTCGTCGGC
CTCGACCCCAGGTGTGGCCCGCGGTACTTGTAGCACGGACTCGGGTGTCC
CGGCTACGGTGGAGGCGGAGTCGCCTAATGCCTATGTCACCTACTCGAAC
ATCAAGTTCGGGCCTATTGGCTCGACTTACTCCAGTGGATCTTCTTCGGG
GTCGGGGTCTAGCTCCAGCTCGAGTTCGACTACCACTAAGGCCACTTCGA
CGACCTTGAAGACTACCTCGACCACCAGCAGTGGAAGCAGTTCGACCTCG
GCGGCGCAGGCGTATGGACAGTGTGGTGGACAGGGCTGGACTGGTCCGAC
CACTTGTGTGAGTGGGTACACTTGCACGTATGAGAATGCGTACTACTCGC
AGTGTTTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000053:138630..140240-

>ATCC10864_002543-T1 ID=ATCC10864_002543-T1|Name=ATCC10864_002543-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1611bp|location=Sequence derived from alignment at MCQH01000053:138630..140240- (Aspergillus niger ATCC 10864)
ATGTCTTCCTTCCAAATCTACCGAGCAGCTCTGCTGCTCTCTATCCTTGC
CACTGCCAATGCTCAGCAGGTTGGCACCTACACCACTGAGACACATCCGT
CTCTGACCTGGCAAACCTGCACCAGCGATGGCAGCTGCACTACCAACGAC
GGCGAGGTGGTCATCGACGCCAATTGGCGTTGGGTGCACTCAACCTCCAG
TGCCACCAACTGCTATACTGGCAACGAATGGGACACCTCAATCTGTACCG
ACGATGTGACCTGCGCCGCGAACTGCGCGCTTGACGGTGCCACTTACGAG
GCGACCTATGGTGTGACCACGTCCGGCAGCGAGCTGCGCCTGAACTTCGT
CACTCAAGGCTCCAGCAAGAACATCGGGTCTCGTTTGTACCTCATGAGCG
ACGACAGCAACTATGAGCTGTTCAAGCTCCTCGGCCAGGAGTTCACCTTT
GATGTCGACGTGTCCAACCTTCCCTGCGGTCTCAACGGCGCGCTCTACTT
CGTCGCCATGGACGCTGACGGTGGCACCTCGGAGTATTCCGGCAACAAGG
CCGGTGCCAAATACGGAACCGGCTACTGCGACTCGCAGTGCCCTCGCGAC
CTGAAGTTCATCAACGGCGAAGCCAACTGCGACGGCTGGGAGCCGTCCAG
CAACAACGTCAACACCGGAGTTGGCGACCACGGCTCCTGCTGCGCCGAGA
TGGACGTCTGGGAAGCGAACAGCATCTCCAACGCCTTCACCGCGCACCCC
TGCGACTCCGTCAGCCAGACAATGTGCGACGGTGACTCCTGTGGTGGAAC
TTACAGCGCCAGCGGCGACCGCTACAGCGGCACCTGCGACCCCGACGGCT
GCGACTACAACCCCTACCGTCTAGGCAACACGGACTTTTACGGCCCCGGC
CTGACCGTCGACACGAACAGCCCCTTCACCGTCGTCACCCAGTTCATCAC
CGATGACGGCACCTCCTCCGGCACCTTGACCGAGATCAAGCGGTTGTACG
TGCAGAACGGCGAGGTCATCGCCAACGGCGCCTCCACCTACTCCAGTGTC
AACGGCAGCTCTATCACCTCCGCTTTCTGTGAATCAGAGAAGACGCTGTT
CGGCGACGAGAATGTCTTCGACAAGCACGGCGGTCTCGAGGGCATGGGCG
AGGCTATGGCCAAGGGCATGGTCTTGGTCTTGAGTCTTTGGGATGACTAT
GCCGCTGACATGCTCTGGCTCGACAGCGACTACCCCGTTAACTCGTCGGC
CTCGACCCCAGGTGTGGCCCGCGGTACTTGTAGCACGGACTCGGGTGTCC
CGGCTACGGTGGAGGCGGAGTCGCCTAATGCCTATGTCACCTACTCGAAC
ATCAAGTTCGGGCCTATTGGCTCGACTTACTCCAGTGGATCTTCTTCGGG
GTCGGGGTCTAGCTCCAGCTCGAGTTCGACTACCACTAAGGCCACTTCGA
CGACCTTGAAGACTACCTCGACCACCAGCAGTGGAAGCAGTTCGACCTCG
GCGGCGCAGGCGTATGGACAGTGTGGTGGACAGGGCTGGACTGGTCCGAC
CACTTGTGTGAGTGGGTACACTTGCACGTATGAGAATGCGTACTACTCGC
AGTGTTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002543ATCC10864_002543Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002543-T1.cdsATCC10864_002543-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002543-T1.exon1ATCC10864_002543-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002543-T1ATCC10864_002543-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00840
InterProIPR013320
InterProIPR000254
InterProIPR037019
InterProIPR001722
PFAMPF00734
InterProIPR035971
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH7
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:138630..140240 -
Powered by Drupal