You are here

Home

ATCC10864_002554-T1, ATCC10864_002554-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002554-T1
Unique NameATCC10864_002554-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:161009..162571+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002554-T1 ID=ATCC10864_002554-T1|Name=ATCC10864_002554-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1563bp|location=Sequence derived from alignment at MCQH01000053:161009..162571+ (Aspergillus niger ATCC 10864)
ATGCTGCTCAAAGCAATTCAAGCATTGGCGCTTTTGGCCACTATCCTCTC
AACCTTCTACGCTCATTTTGCGAATGGCTACCATATACCGAAGCCGAATA
TTCCTGGGCTCAAAATACTTTCTATTACCGCATTTCCACTTCGGGACTAC
ACAATTACGGGCGTGCAAGTGAATCCTATACAGTCCCACACCGTGAATAT
CAGCTTCTGGAATGTCACCGTTACCTATACGCATCCGGGCTGGGATGACT
TGATTCATGTGCATGTTTGGGTCCCATTGTCTGGATGGAACAACCGGCTC
CAGGCAGTTGGGGGAGGAGGATGGGCAGGGCTTTTGGACTATGGCACGCT
AGCTCTGCCTGTCTATCAAGGATTTGCAGCTGCCGGGTCCGACATGGGGC
ACGACAGGAACCCTTGGTCAGCAGAATCATGGGCTCTTGAAGATGCCTCG
GGCCACGTGAATTTCGCTCAACTGATTGATTTCTTCTCAACCTGCCTGAA
TGAGCTGTCGCTCCTCGCTAAGTATGTCATACAGCAGATCTATGGTTTAC
CACCCGCCTACTCCTACTGGAATGGCTGCTCGACTGGTGGGCGGCAGGGA
CTGGAGATCGCCCAACGATGGCCTGATGCATTCGACGGCATATTAGCGGG
AGCGCCAACTATAAATTGGGCGCAATTCGTCCCTGCAAACTACTGGCCAA
CGTTCGTCATGAATCAGCTAGGGGTCTACCCCTCCCTCTGCGTCATGGAA
AAGATTACAGATGCAGCAGTCGCTTCCTGCGACGGTCAGGACGGTGTTAT
AGATGGGATCATTGCTGTGCCGTCGCTTTGCAACTTTAATCCTCTCAGTC
TCATAGGCATGGAGGTTTGGTGTGAATGTATCCCTCGTATAATTACTGCG
GAAGTGGCATTACTTGCAGAGTCATACTGGGCAGGTCTAACTGCTGAGGA
TGGGACCCCTTTGTGGTACGGTTTCAACCAGGGTACGCCATGGAACTATA
CGATCTGCACCTCCACTGATGATATTGGGAATCACCGATGTCATTCTTTG
CCCGATTACTTGAGCGTGGACTGGCTGCAACTTTTTGTTGCTCAAGATCC
TGAATTAGACTTGGTTGATATGGATCAAGCCGATTTAGAGTCCCTCTTTC
ACCAATCCGTCGCCGGATACAAAGCAATTACTGATGCCAACAATCCTGAT
CTCTATGACTTCAAGGTTAGAGGGGGGAAGATTATTCATTGGCATGGCTT
AGCTGATTGGCAGGTTCCCCCAAATGGTTCTGTGGACTACTACAGAAGGG
TACAATTGCGTGATCCATCAGTCCAAGACTTTTATCTGTACTTTGAGGCG
CCAGGAGTTGAACACTGCGGTCATGGGGAAGGGCTTGCTCCAACTGGTTT
GATGGAGTCATTGATGGCATGGGTTGAAGGTGGTGTAGCTCCTGAGTATC
TGCGAGCTGTATCTAAGAATGGTCGGATGTCAAGGATTCTCTGTCCCTAT
CCTGCTATTGCACAGTATGTAGAAGGAGATCCTACAGTGGCCTCATCATT
TGTCTGTCAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000053:161009..162571+

>ATCC10864_002554-T1 ID=ATCC10864_002554-T1|Name=ATCC10864_002554-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3030bp|location=Sequence derived from alignment at MCQH01000053:161009..162571+ (Aspergillus niger ATCC 10864)
ATGCTGCTCAAAGCAATTCAAGCATTGGCGCTTTTGGCCACTATCCTCTC
AACCTTCTACGCTCATTTTGCGAATGGCTACCATATACCGAAGCCGAATA
TTCCTGGGCTCAAAATACTTTCTATTACCGCATTTCCACTTCGGGACTAC
ACAATTACGGGCGTGCAAGTGAATCCTATACAGTCCCACACCGTGAATAT
CAGCTTCTGGAATGTCACCGTTACCTATACGCATCCGGGCTGGGATGACT
TGATTCATGTGCATGTTTGGGTCCCATTGTCTGGATGGAACAACCGGCTC
CAGGCAGTTGGGGGAGGAGGATGGGCAGGGCTTTTGGACTATGGCACGCT
AGCTCTGCCTGTCTATCAAGGATTTGCAGCTGCCGGGTCCGACATGGGGC
ACGACAGGAACCCTTGGTCAGCAGAATCATGGGCTCTTGAAGATGCCTCG
GGCCACGTGAATTTCGCTCAACTGATTGATTTCTTCTCAACCTGCCTGAA
TGAGCTGTCGCTCCTCGCTAAGTATGTCATACAGCAGATCTATGGTTTAC
CACCCGCCTACTCCTACTGGAATGGCTGCTCGACTGGTGGGCGGCAGGGA
CTGGAGATCGCCCAACGATGGCCTGATGCATTCGACGGCATATTAGCGGG
AGCGCCAACTATAAATTGGGCGCAATTCGTCCCTGCAAACTACTGGCCAA
CGTTCGTCATGAATCAGCTAGGGGTCTACCCCTCCCTCTGCGTCATGGAA
AAGATTACAGATGCAGCAGTCGCTTCCTGCGACGGTCAGGACGGTGTTAT
AGATGGGATCATTGCTGTGCCGTCGCTTTGCAACTTTAATCCTCTCAGTC
TCATAGGCATGGAGGTTTGGTGTGAATGTATCCCTCGTATAATTACTGCG
GAAGTGGCATTACTTGCAGAGTCATACTGGGCAGGTCTAACTGCTGAGGA
TGGGACCCCTTTGTGGTACGGTTTCAACCAGGGTACGCCATGGAACTATA
CGATCTGCACCTCCACTGATGATATTGGGAATCACCGATGTCATTCTTTG
CCCGATTACTTGAGCGTGGACTGGCTGCAACTTTTTGTTGCTCAAGATCC
TGAATTAGACTTGGTTGATATGGATCAAGCCGATTTAGAGTCCCTCTTTC
ACCAATCCGTCGCCGGATACAAAGCAATTACTGATGCCAACAATCCTGAT
CTCTATGACTTCAAGGTTCCCCCAAATGGTTCTGTGGACTACTACAGAAG
GGTACAATTGCGTGATCCATCAGTCCAAGACTTTTATCTGTACTTTGAGG
CGCCAGGAGTTGAACACTGCGGTCATGGGGAAGGGCTTGCTCCAACTGGT
TTGATGGAGTCATTGATGGCATGGGTTGAAGGTGGTGTAGCTCCTGAGTA
TCTGCGAGCTGTATCTAAGAATGGTCGGATGTCAAGGATTCTCTGTCCCT
ATCCTGCTATTGCACAGTATGTAGAAGGAGATCCTACAGTGGCCTCATCA
TTTGTCTGTCAGTAGATGCTGCTCAAAGCAATTCAAGCATTGGCGCTTTT
GGCCACTATCCTCTCAACCTTCTACGCTCATTTTGCGAATGGCTACCATA
TACCGAAGCCGAATATTCCTGGGCTCAAAATACTTTCTATTACCGCATTT
CCACTTCGGGACTACACAATTACGGGCGTGCAAGTGAATCCTATACAGTC
CCACACCGTGAATATCAGCTTCTGGAATGTCACCGTTACCTATACGCATC
CGGGCTGGGATGACTTGATTCATGTGCATGTTTGGGTCCCATTGTCTGGA
TGGAACAACCGGCTCCAGGCAGTTGGGGGAGGAGGATGGGCAGGGCTTTT
GGACTATGGCACGCTAGCTCTGCCTGTCTATCAAGGATTTGCAGCTGCCG
GGTCCGACATGGGGCACGACAGGAACCCTTGGTCAGCAGAATCATGGGCT
CTTGAAGATGCCTCGGGCCACGTGAATTTCGCTCAACTGATTGATTTCTT
CTCAACCTGCCTGAATGAGCTGTCGCTCCTCGCTAAGTATGTCATACAGC
AGATCTATGGTTTACCACCCGCCTACTCCTACTGGAATGGCTGCTCGACT
GGTGGGCGGCAGGGACTGGAGATCGCCCAACGATGGCCTGATGCATTCGA
CGGCATATTAGCGGGAGCGCCAACTATAAATTGGGCGCAATTCGTCCCTG
CAAACTACTGGCCAACGTTCGTCATGAATCAGCTAGGGGTCTACCCCTCC
CTCTGCGTCATGGAAAAGATTACAGATGCAGCAGTCGCTTCCTGCGACGG
TCAGGACGGTGTTATAGATGGGATCATTGCTGTGCCGTCGCTTTGCAACT
TTAATCCTCTCAGTCTCATAGGCATGGAGGTTTGGTGTGAATGTATCCCT
CGTATAATTACTGCGGAAGTGGCATTACTTGCAGAGTCATACTGGGCAGG
TCTAACTGCTGAGGATGGGACCCCTTTGTGGTACGGTTTCAACCAGGGTA
CGCCATGGAACTATACGATCTGCACCTCCACTGATGATATTGGGAATCAC
CGATGTCATTCTTTGCCCGATTACTTGAGCGTGGACTGGCTGCAACTTTT
TGTTGCTCAAGATCCTGAATTAGACTTGGTTGATATGGATCAAGCCGATT
TAGAGTCCCTCTTTCACCAATCCGTCGCCGGATACAAAGCAATTACTGAT
GCCAACAATCCTGATCTCTATGACTTCAAGGTTCCCCCAAATGGTTCTGT
GGACTACTACAGAAGGGTACAATTGCGTGATCCATCAGTCCAAGACTTTT
ATCTGTACTTTGAGGCGCCAGGAGTTGAACACTGCGGTCATGGGGAAGGG
CTTGCTCCAACTGGTTTGATGGAGTCATTGATGGCATGGGTTGAAGGTGG
TGTAGCTCCTGAGTATCTGCGAGCTGTATCTAAGAATGGTCGGATGTCAA
GGATTCTCTGTCCCTATCCTGCTATTGCACAGTATGTAGAAGGAGATCCT
ACAGTGGCCTCATCATTTGTCTGTCAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002554ATCC10864_002554Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002554-T1.exon1ATCC10864_002554-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002554-T1.exon2ATCC10864_002554-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002554-T1.cdsATCC10864_002554-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002554-T1ATCC10864_002554-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029058
PFAMPF07519
InterProIPR011118
Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:161009..162571 +
Powered by Drupal