You are here

ATCC10864_002571-T1, ATCC10864_002571-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002571-T1
Unique NameATCC10864_002571-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:205236..206252+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002571-T1 ID=ATCC10864_002571-T1|Name=ATCC10864_002571-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1017bp|location=Sequence derived from alignment at MCQH01000053:205236..206252+ (Aspergillus niger ATCC 10864)
ATGAATACCCCCACCATCGGAGTCTTCCCAGCTGCAGGAGGTATTGGCGG GAGCACCGTCAAGCATCTCTTGCCACGTCTTCCATCTGAGAAGCTTGTGT TTATCGCTCGGAGTCCTGAAAAGCTCAGGAGCTTGCCCGTGGACCAAGCT GTTCTCCGGCAGGCTGACTACGACGACGACGAGAGCTTGAAGGTTGCATT CGAGGGGCTGAACATACTCTTCCTAATCTCCTACGCGTCTGTGGAGCATG AATATCGAACTGAGGTAAGACTTTACCCCCCCTTATGTGGAAGCATCCAG TCCGAAACACATGCTGACCGCGATATGCTTGGGGGATAGCGACACCGCAC TGCCATCGACCATGCGATTCGCATGGGTGTGACACATATCTTCTACGGGT CGCTAGGCTACGGCGGGAACCCCGAAGGTGATAAGTCGGTGGCACACGTC ATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAATGCACGCGGCA GCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCTCTACTCCGAGT CGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGCCCGTCGACGAG ATCAAGATCCCCCACGATGGTGCGGGCCAGGGGATCGCGTGGGTGAAGCG TGAGGAACTTGGGGAAGGGTCCGCAGAGCTCATCAAGAGATTCGTGCAGG ACCCGAACGGGTTTCCCTATCGCAATCGCAAAGTGCTCTTGTCCGGCCCG CGAACCCTGACCCTCGGGGAAACGGTTGCCATTCTGGCCAAGCTCGCCAA TCATACGGTGCGCATTCGCCAGGTCTCCGTGGACGAATTCGCCAGACAAC CTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATCATTCGAAGTTG TGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGCGCTTTCGTGTC CCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGACTTTGAGACTA CCGTGTCCCGGTCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:205236..206252+

>ATCC10864_002571-T1 ID=ATCC10864_002571-T1|Name=ATCC10864_002571-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1884bp|location=Sequence derived from alignment at MCQH01000053:205236..206252+ (Aspergillus niger ATCC 10864)
ATGAATACCCCCACCATCGGAGTCTTCCCAGCTGCAGGAGGTATTGGCGG
GAGCACCGTCAAGCATCTCTTGCCACGTCTTCCATCTGAGAAGCTTGTGT
TTATCGCTCGGAGTCCTGAAAAGCTCAGGAGCTTGCCCGTGGACCAAGCT
GTTCTCCGGCAGGCTGACTACGACGACGACGAGAGCTTGAAGGTTGCATT
CGAGGGGCTGAACATACTCTTCCTAATCTCCTACGCGTCTGTGGAGCATG
AATATCGAACTGAGCGACACCGCACTGCCATCGACCATGCGATTCGCATG
GGTGTGACACATATCTTCTACGGGTCGCTAGGCTACGGCGGGAACCCCGA
AGGTGATAAGTCGGTGGCACACGTCATGCAGGCGCACTTGGACACCGAAA
GATACCTGGAGGAATGCACGCGGCAGCATGTGGGTTTCTCCTACACGGTC
ATCCGCGAAGGTCTCTACTCCGAGTCGTACCCGCTCTATACCGCTTTCTT
TGATCCGAAGCAGCCCGTCGACGAGATCAAGATCCCCCACGATGGTGCGG
GCCAGGGGATCGCGTGGGTGAAGCGTGAGGAACTTGGGGAAGGGTCCGCA
GAGCTCATCAAGAGATTCGTGCAGGACCCGAACGGGTTTCCCTATCGCAA
TCGCAAAGTGCTCTTGTCCGGCCCGCGAACCCTGACCCTCGGGGAAACGG
TTGCCATTCTGGCCAAGCTCGCCAATCATACGGTGCGCATTCGCCAGGTC
TCCGTGGACGAATTCGCCAGACAACCTCAGGTTTCTTCCAACTTCACTTA
CCATGGCGTGGATCATTCGAAGTTGTGGACCTCCACCTTTGAGGCCTTTC
GCCGAGGAGAAGGCGCTTTCGTGTCCCCTTTGCTAGGCGAGCTCCTGGGA
CGCGAGCCGGAGGACTTTGAGACTACCGTGTCCCGGTCTTGAATGAATAC
CCCCACCATCGGAGTCTTCCCAGCTGCAGGAGGTATTGGCGGGAGCACCG
TCAAGCATCTCTTGCCACGTCTTCCATCTGAGAAGCTTGTGTTTATCGCT
CGGAGTCCTGAAAAGCTCAGGAGCTTGCCCGTGGACCAAGCTGTTCTCCG
GCAGGCTGACTACGACGACGACGAGAGCTTGAAGGTTGCATTCGAGGGGC
TGAACATACTCTTCCTAATCTCCTACGCGTCTGTGGAGCATGAATATCGA
ACTGAGCGACACCGCACTGCCATCGACCATGCGATTCGCATGGGTGTGAC
ACATATCTTCTACGGGTCGCTAGGCTACGGCGGGAACCCCGAAGGTGATA
AGTCGGTGGCACACGTCATGCAGGCGCACTTGGACACCGAAAGATACCTG
GAGGAATGCACGCGGCAGCATGTGGGTTTCTCCTACACGGTCATCCGCGA
AGGTCTCTACTCCGAGTCGTACCCGCTCTATACCGCTTTCTTTGATCCGA
AGCAGCCCGTCGACGAGATCAAGATCCCCCACGATGGTGCGGGCCAGGGG
ATCGCGTGGGTGAAGCGTGAGGAACTTGGGGAAGGGTCCGCAGAGCTCAT
CAAGAGATTCGTGCAGGACCCGAACGGGTTTCCCTATCGCAATCGCAAAG
TGCTCTTGTCCGGCCCGCGAACCCTGACCCTCGGGGAAACGGTTGCCATT
CTGGCCAAGCTCGCCAATCATACGGTGCGCATTCGCCAGGTCTCCGTGGA
CGAATTCGCCAGACAACCTCAGGTTTCTTCCAACTTCACTTACCATGGCG
TGGATCATTCGAAGTTGTGGACCTCCACCTTTGAGGCCTTTCGCCGAGGA
GAAGGCGCTTTCGTGTCCCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCC
GGAGGACTTTGAGACTACCGTGTCCCGGTCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002571ATCC10864_002571Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002571-T1.exon1ATCC10864_002571-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002571-T1.exon2ATCC10864_002571-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002571-T1.cdsATCC10864_002571-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002571-T1ATCC10864_002571-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016040
InterProIPR036291
PFAMPF05368
PFAMPF13460
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:205236..206252 +