You are here

Home

ATCC10864_002578-T1, ATCC10864_002578-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002578-T1
Unique NameATCC10864_002578-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:221077..222855-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002578-T1 ID=ATCC10864_002578-T1|Name=ATCC10864_002578-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1779bp|location=Sequence derived from alignment at MCQH01000053:221077..222855- (Aspergillus niger ATCC 10864)
ATGTCTGCTTTATCGTCAAACCAGGACTGCACTGCGGCAGTCTGTGAGAA
GGAGGCTGTTGTGGAGGAGGTCCTTTCTGGCTCTACCTCGAGTAGTGGTA
TAGATGTGCAGCATCAGACGGGAACAGTTGGTTCACCGACATATCCCCCA
CTTGCCAAAACCATCCTCGTCGCTCTCGCTTTATATATTGCCGTTTTTCT
CGTCTCTTTGGTAAGCTATGGAAGATTACCGGTCTAACCCCCCTCAAGGA
CTGACTCTGATTACGGGCTTGTGCAGGACCGCCTGATTGTGGCTACGGCA
ACTCCGAAAATCACTGATAACTTTCATAGTATTGGCGATATTGGCTGGTA
TGGAAGCTCCTATATGTTAGCGGCGTCTGCGTCTCAGCTTACATACGGTC
GCATCTACACTTTCTATCCAATCAAATGGGTATTCCTTCTCTCCATCTTT
ATCTTCGAGGTCGGTTCCGCTATTTGCGGTGCTGCGCCCTCCTCCTTTAC
GCTCATCCTGGGCCGCGCGATCGCAGGCCTCGGGACAGCAGGCATATACT
CCGGGGCTGTCATCATCATCGCCCTTACTGTGCCCCTCCGCTTGAGGCCT
GTGTTTCAAGGAGCCGTTGGTGCAATAATCGGCATATCATCTGTTTTGGG
CCCAATTCTCGGTGGAGTTTTTACAACAGAGGTCAGCTGGAGGTGGTGTT
TCTACATTAACTTGCCCCTAGGAGGACTTGCAGTCGTCGCCATATTCTTT
CTACTAGACGTTCCTCCACCTGAGAAAGGGGACTGGAGTCTCAGAGAGAA
GTTTAATCAGCTCGACCCCGTTGGAAATCTTCTTATGGCCCCTGCTGTGA
CCTGTCTCCTTCTTGCCCTCCAATGGGGCGGGACCACATACAGCTGGGGA
AATTGGCGCATTATCTTTCTCTTTGTTATGTTCGGGACTTTGTTCTCTAT
CTTTGCATTTGCAGAGTACCGCCTCCAAGAGAAAGCAATGGTTCCCCCTC
GCATCTTTAAACAGCGCTCAGTCCTTGCAGGCATTGTGTTCACTATGTGC
ACTAGTGCAAGCACTATGGTCATGCTTTACTACCTTCCCATCTGGTTCCA
AGCCATCAAGAATGTCGATGCCGAAAAATCGGGTATTATGAATCTTCCTC
TTGTACTCGCGATGGTGGTAGGCTCCATCGGTTCTGGCTCACTCGTCAGC
CTTCTGGGATACTACAACCCCTTCATGTTTGCAGGCGTTGTTTTCATGTC
TGTTGGAGCCGGTTTACTAAGTACATTTCAGCCGGACACCGACCATCCGA
AATGGATTGGGTATCAGATTATCTTCGGCTTTGGTCTGGGCCTTGGTGTC
CAACAAGCAAATGTCGCTGTGCAGACGTGCCTAGATCCTGTCGACATTCC
GGTCGGTGCATCGCTTCTAATGTTTTCGCAACAATTGAATGGCGCTGTCT
TTCTAGCGGTCGCGCAGAATCTTTTCACGAATTTTCTTACCTCAAACCTA
GACGACATTGAAGGCATCTACGCAACATGGGTGATTGCAAGTGGCGCTAC
TACCATACGAAACTTGGTGCCTCCTGCAAAGCTGGCAGTGGTTCTGAAAG
CGTACAGCGACGCCATTATGAAGACATTCATTCTAGCGTTAGCTATGTCC
TGTCTGGCCCTGTTCCCAACACTTGCTATGGAGTGGAAAAATGTGAAGAG
GGTAGCTAAAGGTATTGAGAATGGTGATGACGCATCAGGGAGTATTGAAA
GCAAGAGAGAGCCATTGAAGGCGTGCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:221077..222855-

>ATCC10864_002578-T1 ID=ATCC10864_002578-T1|Name=ATCC10864_002578-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3426bp|location=Sequence derived from alignment at MCQH01000053:221077..222855- (Aspergillus niger ATCC 10864)
GACCGCCTGATTGTGGCTACGGCAACTCCGAAAATCACTGATAACTTTCA
TAGTATTGGCGATATTGGCTGGTATGGAAGCTCCTATATGTTAGCGGCGT
CTGCGTCTCAGCTTACATACGGTCGCATCTACACTTTCTATCCAATCAAA
TGGGTATTCCTTCTCTCCATCTTTATCTTCGAGGTCGGTTCCGCTATTTG
CGGTGCTGCGCCCTCCTCCTTTACGCTCATCCTGGGCCGCGCGATCGCAG
GCCTCGGGACAGCAGGCATATACTCCGGGGCTGTCATCATCATCGCCCTT
ACTGTGCCCCTCCGCTTGAGGCCTGTGTTTCAAGGAGCCGTTGGTGCAAT
AATCGGCATATCATCTGTTTTGGGCCCAATTCTCGGTGGAGTTTTTACAA
CAGAGGTCAGCTGGAGGTGGTGTTTCTACATTAACTTGCCCCTAGGAGGA
CTTGCAGTCGTCGCCATATTCTTTCTACTAGACGTTCCTCCACCTGAGAA
AGGGGACTGGAGTCTCAGAGAGAAGTTTAATCAGCTCGACCCCGTTGGAA
ATCTTCTTATGGCCCCTGCTGTGACCTGTCTCCTTCTTGCCCTCCAATGG
GGCGGGACCACATACAGCTGGGGAAATTGGCGCATTATCTTTCTCTTTGT
TATGTTCGGGACTTTGTTCTCTATCTTTGCATTTGCAGAGTACCGCCTCC
AAGAGAAAGCAATGGTTCCCCCTCGCATCTTTAAACAGCGCTCAGTCCTT
GCAGGCATTGTGTTCACTATGTGCACTAGTGCAAGCACTATGGTCATGCT
TTACTACCTTCCCATCTGGTTCCAAGCCATCAAGAATGTCGATGCCGAAA
AATCGGGTATTATGAATCTTCCTCTTGTACTCGCGATGGTGGTAGGCTCC
ATCGGTTCTGGCTCACTCGTCAGCCTTCTGGGATACTACAACCCCTTCAT
GTTTGCAGGCGTTGTTTTCATGTCTGTTGGAGCCGGTTTACTAAGTACAT
TTCAGCCGGACACCGACCATCCGAAATGGATTGGGTATCAGATTATCTTC
GGCTTTGGTCTGGGCCTTGGTGTCCAACAAGCAAATGTCGCTGTGCAGAC
GTGCCTAGATCCTGTCGACATTCCGGTCGGTGCATCGCTTCTAATGTTTT
CGCAACAATTGAATGGCGCTGTCTTTCTAGCGGTCGCGCAGAATCTTTTC
ACGAATTTTCTTACCTCAAACCTAGACGACATTGAAGGCATCTACGCAAC
ATGGGTGATTGCAAGTGGCGCTACTACCATACGAAACTTGGTGCCTCCTG
CAAAGCTGGCAGTGGTTCTGAAAGCGTACAGCGACGCCATTATGAAGACA
TTCATTCTAGCGTTAGCTATGTCCTGTCTGGCCCTGTTCCCAACACTTGC
TATGGAGTGGAAAAATGTGAAGAGGGTAGCTAAAGGTATTGAGAATGGTG
ATGACGCATCAGGGAGTATTGAAAGCAAGAGAGAGCCATTGAAGGCGTGC
TGAATGTCTGCTTTATCGTCAAACCAGGACTGCACTGCGGCAGTCTGTGA
GAAGGAGGCTGTTGTGGAGGAGGTCCTTTCTGGCTCTACCTCGAGTAGTG
GTATAGATGTGCAGCATCAGACGGGAACAGTTGGTTCACCGACATATCCC
CCACTTGCCAAAACCATCCTCGTCGCTCTCGCTTTATATATTGCCGTTTT
TCTCGTCTCTTTGGACCGCCTGATTGTGGCTACGGCAACTCCGAAAATCA
CTGATAACTTTCATAGTATTGGCGATATTGGCTGGTATGGAAGCTCCTAT
ATGTTAGCGGCGTCTGCGTCTCAGCTTACATACGGTCGCATCTACACTTT
CTATCCAATCAAATGGGTATTCCTTCTCTCCATCTTTATCTTCGAGGTCG
GTTCCGCTATTTGCGGTGCTGCGCCCTCCTCCTTTACGCTCATCCTGGGC
CGCGCGATCGCAGGCCTCGGGACAGCAGGCATATACTCCGGGGCTGTCAT
CATCATCGCCCTTACTGTGCCCCTCCGCTTGAGGCCTGTGTTTCAAGGAG
CCGTTGGTGCAATAATCGGCATATCATCTGTTTTGGGCCCAATTCTCGGT
GGAGTTTTTACAACAGAGGTCAGCTGGAGGTGGTGTTTCTACATTAACTT
GCCCCTAGGAGGACTTGCAGTCGTCGCCATATTCTTTCTACTAGACGTTC
CTCCACCTGAGAAAGGGGACTGGAGTCTCAGAGAGAAGTTTAATCAGCTC
GACCCCGTTGGAAATCTTCTTATGGCCCCTGCTGTGACCTGTCTCCTTCT
TGCCCTCCAATGGGGCGGGACCACATACAGCTGGGGAAATTGGCGCATTA
TCTTTCTCTTTGTTATGTTCGGGACTTTGTTCTCTATCTTTGCATTTGCA
GAGTACCGCCTCCAAGAGAAAGCAATGGTTCCCCCTCGCATCTTTAAACA
GCGCTCAGTCCTTGCAGGCATTGTGTTCACTATGTGCACTAGTGCAAGCA
CTATGGTCATGCTTTACTACCTTCCCATCTGGTTCCAAGCCATCAAGAAT
GTCGATGCCGAAAAATCGGGTATTATGAATCTTCCTCTTGTACTCGCGAT
GGTGGTAGGCTCCATCGGTTCTGGCTCACTCGTCAGCCTTCTGGGATACT
ACAACCCCTTCATGTTTGCAGGCGTTGTTTTCATGTCTGTTGGAGCCGGT
TTACTAAGTACATTTCAGCCGGACACCGACCATCCGAAATGGATTGGGTA
TCAGATTATCTTCGGCTTTGGTCTGGGCCTTGGTGTCCAACAAGCAAATG
TCGCTGTGCAGACGTGCCTAGATCCTGTCGACATTCCGGTCGGTGCATCG
CTTCTAATGTTTTCGCAACAATTGAATGGCGCTGTCTTTCTAGCGGTCGC
GCAGAATCTTTTCACGAATTTTCTTACCTCAAACCTAGACGACATTGAAG
GCATCTACGCAACATGGGTGATTGCAAGTGGCGCTACTACCATACGAAAC
TTGGTGCCTCCTGCAAAGCTGGCAGTGGTTCTGAAAGCGTACAGCGACGC
CATTATGAAGACATTCATTCTAGCGTTAGCTATGTCCTGTCTGGCCCTGT
TCCCAACACTTGCTATGGAGTGGAAAAATGTGAAGAGGGTAGCTAAAGGT
ATTGAGAATGGTGATGACGCATCAGGGAGTATTGAAAGCAAGAGAGAGCC
ATTGAAGGCGTGCTGAATGTCTGCTTTATCGTCAAACCAGGACTGCACTG
CGGCAGTCTGTGAGAAGGAGGCTGTTGTGGAGGAGGTCCTTTCTGGCTCT
ACCTCGAGTAGTGGTATAGATGTGCAGCATCAGACGGGAACAGTTGGTTC
ACCGACATATCCCCCACTTGCCAAAACCATCCTCGTCGCTCTCGCTTTAT
ATATTGCCGTTTTTCTCGTCTCTTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002578ATCC10864_002578Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002578-T1ATCC10864_002578-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002578-T1.cdsATCC10864_002578-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002578-T1.exon2ATCC10864_002578-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002578-T1.exon1ATCC10864_002578-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
PFAMPF07690
InterProIPR020846
PFAMPF06609
InterProIPR011701
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:221077..222855 -
Powered by Drupal