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ATCC10864_002631-T1, ATCC10864_002631-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002631-T1
Unique NameATCC10864_002631-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:353169..354848+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002631-T1 ID=ATCC10864_002631-T1|Name=ATCC10864_002631-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1680bp|location=Sequence derived from alignment at MCQH01000053:353169..354848+ (Aspergillus niger ATCC 10864)
ATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCA
GAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAA
GACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATG
GTGGACCGGTCTGAGTTTGTAGGTTCCCCTACGAATGTACTTTTTGGATC
TCAACTAACCGGCCTGGAGGCGTGGCGCATGCTCACTAGGTCGTTCATGA
CACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCATGCG
CGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCTAC
TCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAA
ACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCT
GATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGT
GGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATG
GTGCTTTCCTCCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGA
CTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGA
AACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTG
CAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAAC
ACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCC
CCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATC
TGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAA
GGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAG
TGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGA
TTGACGCCATGCTACGGCGGTACTTGGACATCATCTACAAGTACGTTCTT
GAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGT
GGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACG
GCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAAAGAGCGGCCTCC
CCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCAT
GGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTG
GCGATATGCCCGCATTCGAGAATGTCCTGGCTCTCGTTGAGCAGGCAATC
AAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGA
TCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCA
GACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCT
GTCGAGTTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAA
GCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAAAGGGAT
CTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACG
ACTACTCCGGACAACCTGGTGAGCGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000053:353169..354848+

>ATCC10864_002631-T1 ID=ATCC10864_002631-T1|Name=ATCC10864_002631-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3258bp|location=Sequence derived from alignment at MCQH01000053:353169..354848+ (Aspergillus niger ATCC 10864)
ATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCA
GAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAA
GACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATG
GTGGACCGGTCTGAGTTTGCGTGGCGCATGCTCACTAGGTCGTTCATGAC
ACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCATGCGC
GCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCTACT
CGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAAA
CCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCTG
ATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGTG
GATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATGG
TGCTTTCCTCCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGAC
TTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGAA
ACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTGC
AAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAACA
CTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCCC
CCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATCT
GGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAAG
GCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAGT
GAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGAT
TGACGCCATGCTACGGCGGTACTTGGACATCATCTACAAGTACGTTCTTG
AACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGTG
GAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACGG
CCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAAAGAGCGGCCTCCC
CCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCATG
GTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTGG
CGATATGCCCGCATTCGAGAATGTCCTGGCTCTCGTTGAGCAGGCAATCA
AGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGAT
CCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCAG
ACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCTG
TCGAGTTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAAG
CCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAAAGGGATC
TGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACGA
CTACTCCGGACAACCTGGTGAGCGGTTGAATGGCGGTCCCGGAGACACAG
CCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCCTATAGCTGCTGC
TGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCTACGAAAGTATTG
GAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGGTCTGAGTTTGCG
TGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAGACCAGAAAAAGGT
TCTCGCATACTCCCCCATGTACCATGCGCGCTTGTTCCGTGAGCAAGCGA
ATGTCCGCGTACAGCACTTCCACCCTACTCGCGCTGCCGCCGGCAAAGGC
GAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGTTCGATCGGCCTCT
ATTCGTACAATTCTGCGCCAATGATCCTGATGATTTCTTGGAGGCCGCGC
GTCATGTGGCACCATATTGCGATGCAGTGGATCTCAATCTGGGATGTCCC
CAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCCTCCAGGAGGACTG
GGACCTGATTTACAGGCTGATTAACCGACTTCACAACGAACTCTCGATCC
CAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGAGAAAACGCTCGAA
TATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAATCACTGTGCATGG
ACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTGGCTGATTGGAGCT
ACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGACGGTCATCTTCGCG
AACGGCAACAACCTGAACTATGAAGATCTGGACCGTTGTCTGGAAGAGAC
AGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTGTCTGATCCGTCAA
TTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAGGGAATACTGGCGA
GGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCATGCTACGGCGGTA
CTTGGACATCATCTACAAGTACGTTCTTGAACAACCTGTTCCGGAAAGGA
AGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGAATTTGAACAGACA
ACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTAAGAAGAAGCAAAA
GCGCGAGAAGTCGAAAAGAGCGGCCTCCCCCAGTCTTGGTGTAATGCAGG
GTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGTGCATACCAATGTC
CGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGCCCGCATTCGAGAA
TGTCCTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGTCTCAAGGAATACG
AGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCAAGAACTGACCGGA
TCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGTGGATCTGCCAGCC
ACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGTTGGGCGCACTTACTG
TGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGCGGACGAGTCTTCT
GAAAAGGCCACCCCTGCTGCAAAGGGATCTGCCACTCCTTCGAAGTCGGA
CGTGGACGCGACCACCCCTGCCACGACGACTACTCCGGACAACCTGGTGA
GCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002631ATCC10864_002631Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002631-T1.exon1ATCC10864_002631-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002631-T1.exon2ATCC10864_002631-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002631-T1.cdsATCC10864_002631-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002631-T1ATCC10864_002631-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018517
PFAMPF01207
InterProIPR013785
InterProIPR035587
Properties
Property NameValue
NoteBUSCO:EOG09262Q6S
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:353169..354848 +
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