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ATCC10864_002642-T1, ATCC10864_002642-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002642-T1
Unique NameATCC10864_002642-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:369941..371067+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002642-T1 ID=ATCC10864_002642-T1|Name=ATCC10864_002642-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1127bp|location=Sequence derived from alignment at MCQH01000053:369941..371067+ (Aspergillus niger ATCC 10864)
ATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGACGA
GCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCCAAG
ATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCCGAC
GAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGGAGC
CGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGAAGG
CGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTTGAT
GATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAAGAT
GCGAATGTACGTGATTATATACATTTGTCTGACTGTCTACTAGATACATT
TGTACTGACGCAATACTATCGCAGTGGAGAGGAGCGCAAACCTCTCGCGA
AGATCGACGGCGCTACAGTTGACGTGGACGCGTTATGGGCGAAGATGAAC
GCTCCAGACTCGGGAGTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGA
AGCTACGCCTGCGGCTGGCCAGACCGACGGGGAAACGGCAGGTGGTGACG
AGGCGACCCCCTCCGCACAGGAGCCCCAGACGAAGTATACCGAAGAGATG
GTGAAGATCAAGCGCACATACAAGTTTGCAGGAGAGATGATTACGGAAGA
GAAGATTGTGCCCAAGGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCG
AGAAGGATGCGGAGACCGTGACTGCTGCAGATGTAGACAACGCAGCGAAT
GCTAAAGACGCCCTCAAACTGCGCAGACCGCTTCGACGACCTTCCCGCTT
CGATCCGAATCCCACCGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCG
TTACAGAGGCGACGGCTGGACAGGAGAACGCCCGGGGACCAAAGATCAAC
ACGGTCGAGAAGTCGCGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGG
AATCAAGGACGAGCTCAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGG
GTCGCATGGATTTCTTGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGG
AGAAATGCTCGTCTGAAGGGGCTTTAA
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Coding sequence (CDS) from alignment at MCQH01000053:369941..371067+

>ATCC10864_002642-T1 ID=ATCC10864_002642-T1|Name=ATCC10864_002642-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2118bp|location=Sequence derived from alignment at MCQH01000053:369941..371067+ (Aspergillus niger ATCC 10864)
ATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGACGA
GCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCCAAG
ATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCCGAC
GAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGGAGC
CGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGAAGG
CGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTTGAT
GATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAAGAT
GCGAATTGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACGGCGCTACAG
TTGACGTGGACGCGTTATGGGCGAAGATGAACGCTCCAGACTCGGGAGTA
GATGCTTCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCCTGCGGCTGG
CCAGACCGACGGGGAAACGGCAGGTGGTGACGAGGCGACCCCCTCCGCAC
AGGAGCCCCAGACGAAGTATACCGAAGAGATGGTGAAGATCAAGCGCACA
TACAAGTTTGCAGGAGAGATGATTACGGAAGAGAAGATTGTGCCCAAGGA
TTCAGCGGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATGCGGAGACCG
TGACTGCTGCAGATGTAGACAACGCAGCGAATGCTAAAGACGCCCTCAAA
CTGCGCAGACCGCTTCGACGACCTTCCCGCTTCGATCCGAATCCCACCGG
TTCGATCAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGGCGACGGCTG
GACAGGAGAACGCCCGGGGACCAAAGATCAACACGGTCGAGAAGTCGCGT
CTGGACTGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGACGAGCTCAA
CGTGCACAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGGATTTCTTGG
ACCGCGTGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCTCGTCTGAAG
GGGCTTTAAATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTT
GGACGACGAGCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACG
CAGCCCAAGATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAG
GCCGCCGACGAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGC
GCAAGGAGCCGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGA
TCCAGAAGGCGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTG
GATCTTGATGATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGC
GATGAAGATGCGAATTGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACG
GCGCTACAGTTGACGTGGACGCGTTATGGGCGAAGATGAACGCTCCAGAC
TCGGGAGTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCC
TGCGGCTGGCCAGACCGACGGGGAAACGGCAGGTGGTGACGAGGCGACCC
CCTCCGCACAGGAGCCCCAGACGAAGTATACCGAAGAGATGGTGAAGATC
AAGCGCACATACAAGTTTGCAGGAGAGATGATTACGGAAGAGAAGATTGT
GCCCAAGGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATG
CGGAGACCGTGACTGCTGCAGATGTAGACAACGCAGCGAATGCTAAAGAC
GCCCTCAAACTGCGCAGACCGCTTCGACGACCTTCCCGCTTCGATCCGAA
TCCCACCGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGG
CGACGGCTGGACAGGAGAACGCCCGGGGACCAAAGATCAACACGGTCGAG
AAGTCGCGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGA
CGAGCTCAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGG
ATTTCTTGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCT
CGTCTGAAGGGGCTTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SWC5ATCC10864_002642Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002642-T1.exon1ATCC10864_002642-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002642-T1.exon2ATCC10864_002642-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002642-T1.cdsATCC10864_002642-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002642-T1ATCC10864_002642-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07572
InterProIPR027124
InterProIPR011421
Properties
Property NameValue
Productswr complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:369941..371067 +
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