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ATCC10864_002658-T1, ATCC10864_002658-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002658-T1
Unique NameATCC10864_002658-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:445303..447574-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002658-T1 ID=ATCC10864_002658-T1|Name=ATCC10864_002658-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2272bp|location=Sequence derived from alignment at MCQH01000053:445303..447574- (Aspergillus niger ATCC 10864)
ATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGA
TAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAA
TTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTC
GAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGG
TATCCTAAAGAAAAGGTATAACTACTCTCTGAATACTGTAATCATGCAGG
CGCTTACCGACCTCTTCTACTAGATATACCGACTTCCTTGTCAACGAGAT
CGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAG
CAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCA
GAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGC
GCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGA
CGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCG
CTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACC
TAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGC
ACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGAC
AGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAG
TGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGG
ATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAG
GATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACAC
GAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTC
AGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAAC
CCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGG
CCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTG
AGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCA
AAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGG
TTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTA
CAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGC
GATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGG
CGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAG
CTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAG
CTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCG
TGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGC
GGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCC
GGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGT
GCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCG
CGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGA
GACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGC
CGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCC
AGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTAC
AAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACAT
GCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGC
TCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAG
GACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAA
GGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGG
AGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCC
ACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCC
CGATTTCGGCAAGGGTCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000053:445303..447574-

>ATCC10864_002658-T1 ID=ATCC10864_002658-T1|Name=ATCC10864_002658-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4428bp|location=Sequence derived from alignment at MCQH01000053:445303..447574- (Aspergillus niger ATCC 10864)
ATATACCGACTTCCTTGTCAACGAGATCGTACCGTCCGGCGAAGTCCTGC
ATCTTCACAACATCCCCACCCCGGAAGCAGAACAGGAGAAGGCTAAGCCC
GCGGATACTCCCACGCCCAAACCCGCAGAAAATGATCAGCAGGAAAAGCC
AGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTGCAGAGAGCACGCCGG
ACTTCCAGATCCCAGAGGAAGACATGACGCTCCTTGAATCCCTGTTTGGC
GAAGAATCTACCAAGAAGATTGTATCGCTGAACAAACGTGCCCTTCTCAA
TCCCAAATCGAAACCGAGCGACCTACCTAAGATTCCCACTCTTCTTGTCG
ATGACCGCGACCTGCGCATCAAGATGCACCAGGCCATCCGTCGCATCTTC
AAATCGCAACTCGAGTCTCAAACCGACAGCGAAGGGATGATGGTTATTTC
TGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGGGCGGGCGTAACAATG
CGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTGGGTGGTCCCTATCTG
CACTTCACTCTGTACAAGGAGAATAAGGATACTATGGAAGTTCTCTCGTT
CATCTCGCGGCAGTTGAAGATTAACACGAAGAACTTCCAATTCGCTGGAA
CCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCCTGTGCGCACCGTTTA
CATGCTGAGCGCCTCACAAAGATCAACCCTACGCTTCGCAACGCTGCTCT
CGGCGATTTCGAGTATTGCAAACATGGCCTTGACCTGGGAGATCTGAATG
GCAACGAATTCGTTATCAGTCTCCGTGAGTGCGATATTCCAGGTGTCGAC
TTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAAGGAGGTCGTGGGCAC
AGCACTACGGAATCTCCGCGAGCGCGGTTACTTCAACTACTTCGGTCTGC
AACGTTTTGGAACCTTTGCTACCCGTACAGACACGGTCGGTGTCAAGATG
CTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCATCCTCCAGTACAGCCC
TCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACTCGACGGCCTTGGTCA
GCTCCGATGACAAGGCCCGCGCAGAAGCTATCCACATTTTTGAAACGACC
GGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCGAAAATTCGCGGCAGA
ATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGAACGACTACCTTGGTG
CGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATGTATGTCCACGCGTAC
CAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCGCTGGCGCCTGTACGG
CGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGCACGAGCACAGCGACA
AGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAGGTTGACGCCGATGGC
GAAGTCATCATCACCCCGCAGGCGGGAGACAGCGCTTACGTCTCTGAAGG
CATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGGCAGCTAGCGGCAAGT
ACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGCTACGATGTCCTTTAC
CCGCCCAACAAGATGACGGACTTCTACAAACAATTCATGGGCAGTGCTCA
GGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCAAGTGGAGGGAGGTTA
GTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGCCCGGGACCCGACTTC
TCCTTCGACGTGCATGTGTATACTCAGGACGATGAGCAGTTTGTGCAGAC
TGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGACTGAGACTTCCGGTG
AAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTCGCCATTGTGCTCAAG
TTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGCTCTGAGGGAGTTGTC
CAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCGGCAAGGGTCGGTAGA
TGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGAT
AACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAAT
TGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTCG
AGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGGT
ATCCTAAAGAAAAGATATACCGACTTCCTTGTCAACGAGATCGTACCGTC
CGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAGG
AGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGAT
CAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTGC
AGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTTG
AATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAAA
CGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTCC
CACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCCA
TCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGGG
ATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGGG
CGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTGG
GTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTATG
GAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACTT
CCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCCT
GTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCTT
CGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACCT
GGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGATA
TTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAAG
GAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCAA
CTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACGG
TCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCATC
CTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACTC
GACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCACA
TTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCGA
AAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGAA
CGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATGT
ATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCGC
TGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGCA
CGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAGG
TTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGCT
TACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGGC
AGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGCT
ACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATTC
ATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCAA
GTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGCC
CGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGAG
CAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGAC
TGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTCG
CCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGCT
CTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCGG
CAAGGGTCGGTAGATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGC
GGCTCAAGACCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCC
TCCAACGAGGCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGA
GGCGAGAGAACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATG
AAGGGTTCTACGGTATCCTAAAGAAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002658ATCC10864_002658Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002658-T1ATCC10864_002658-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002658-T1.cdsATCC10864_002658-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002658-T1.exon2ATCC10864_002658-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002658-T1.exon1ATCC10864_002658-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001656
InterProIPR042214
PFAMPF01142
InterProIPR011760
InterProIPR020103
Properties
Property NameValue
NoteBUSCO:EOG09261EY9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:445303..447574 -
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