You are here

Home

ATCC10864_002666-T1, ATCC10864_002666-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002666-T1
Unique NameATCC10864_002666-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:468697..470479-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002666-T1 ID=ATCC10864_002666-T1|Name=ATCC10864_002666-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1783bp|location=Sequence derived from alignment at MCQH01000053:468697..470479- (Aspergillus niger ATCC 10864)
ATGGCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGT
TTCCTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTC
CACCTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCT
TACGCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGC
TCCTATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCG
CTCCTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCG
GCAGACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATC
AGGAATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTG
GTCCTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATC
CCGCAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTT
CACATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTG
AACAACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGG
GAGCCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGAC
CCGCGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACT
CTTTCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTC
GAACTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGG
TCGCCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATAC
GTTCCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATT
CTCAGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGA
TTATTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTG
TCCCCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGG
AATGTGGAAAATCCTAGCACACCACTTAAGCGTAGGTTTACCCCGAGATA
TTAAGAAGTGTTACAAACTAATCAATTGGCAAATAGGCCCGCTATCAGCA
ACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTAT
GGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGC
GCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCC
GTGGATATCCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCC
TAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGG
ATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCG
CGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAA
ATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCA
CGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCC
GGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATG
GCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGT
TTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTAC
TCGAAGGATGTGAAGGAGGATCGAGCGGACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:468697..470479-

>ATCC10864_002666-T1 ID=ATCC10864_002666-T1|Name=ATCC10864_002666-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3456bp|location=Sequence derived from alignment at MCQH01000053:468697..470479- (Aspergillus niger ATCC 10864)
GCCCGCTATCAGCAACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAG
TATCGTCTACTTATGGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGC
AAAACGTACCAGGCGCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGA
GCCGATCGGAATCCGTGGATATCCCTGGCTCCGGCGCCTCCACACCGATC
GGAGAGAGAGCCCCTAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGC
TAAGAAGCTGATGGATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGT
CGGTAGAGACCGCGCGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATG
TTTGGAACCAAGAAATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGG
CAGTGGATTCTCCACGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGA
GCACGGACAAACCCGGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAA
CGTCTGGGAACATGGCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGT
CCGGGATGTTCTGTTTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACG
TACAAAAGGCCTACTCGAAGGATGTGAAGGAGGATCGAGCGGACTGAATG
GCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGTTTC
CTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTCCAC
CTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCTTAC
GCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGCTCC
TATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCGCTC
CTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCGGCA
GACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATCAGG
AATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTGGTC
CTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATCCCG
CAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTTCAC
ATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTGAAC
AACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGGGAG
CCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGACCCG
CGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACTCTT
TCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTCGAA
CTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGGTCG
CCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATACGTT
CCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATTCTC
AGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGATTA
TTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTGTCC
CCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGGAAT
GTGGAAAATCCTAGCACACCACTTAAGCGCCCGCTATCAGCAACCGAACC
GCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTATGGACAAGG
ACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGCGCAGCACG
AATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCCGTGGATAT
CCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCCTAGTATCG
ATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGGATGCCAAG
GCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCGCGCCTGGC
TACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAAATCTTACT
CGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCACGCCGTCC
CGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCCGGACGTTC
CGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATGGCGAGAAG
ACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGTTTATGCTG
GAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTACTCGAAGGA
TGTGAAGGAGGATCGAGCGGACTGAATGGCGCAGCCCCAGCAACAACACT
TGACGCAGTCATTTTCCCCGCCGGTTTCCTCACCTTCACCTGGTGCCCCA
TCGCCTGTAAATGGTGGTGTCCCTCCACCTCTCAAGCGTCAACGTCTCTC
ACCTCTCCCTCAGTCCCAGTCCCCTTACGCCTCACCTAGCTTCGGGACTT
TACAACTGCCACAACACCAGCCCGCTCCTATGACTACACCGACCATGAAC
ATGAACGGCGTCCCCCAGTCTCCCGCTCCTCCTCCACCTCCACCTCCAGG
CGCGATGGGGCCTCCTTCTCGACCGGCAGACAAGGCTACCGATGCTGCTG
AGCTCACAGATGTGCTAGCATCATCAGGAATTGATGTCCGGGAAGAGGAG
GCCTACTTGACGAGCAGTTACTCTGGTCCTCCGGTGCAGGCTCAACAACC
ACCTCGCCCTCAACAGCCACAGATCCCGCAGCAACAACCTCAACAGTCGG
TGCCACCTGCTGTCAACACCTCGTTCACATCACAAGCATCGACAATTGGG
AGCGTTCCTACGACTCCTAGTTTTGAACAACCCTCCCCATATAAGCCGGC
GACGACGCAGGATTCCTTCTACAGGGAGCCGTCGACGCAGCCTCCTGCGC
CTTTCAAGGATCCCAATGAGCCGACCCGCGAAGACACTGAGGCAGCTCGG
CGCGCGCAGTATACTCTACAAGACTCTTTCTTGTGGACTAAGGTATTGGA
GCAGAGGCTGCAGAAACGTGGATTCGAACTCGGTGTCCGTATACCGGCAG
AGGGCCTGTATCATCCCGTGCCCGGTCGCCAACAACCTATCGAAGTCACT
GGACCAGATGGATCATCGATCATACGTTCCGGGCAAACAATCTTGAACCA
AACCGGCGCACCTCTATTGGACATTCTCAGCTTAATGTCCATCGCATGTG
AAGAGCGGTTGCGAACGGTGGTCGATTATTCTTCAACACTGGCTCGAAGT
CGACGCGCGCACTCACACGGAATTGTCCCCACCGATTGGAAAGACGTTGC
TACATCGGCTAATGCTGTCAATGGGAATGTGGAAAATCCTAGCACACCAC
TTAAGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002666ATCC10864_002666Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002666-T1ATCC10864_002666-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002666-T1.cdsATCC10864_002666-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002666-T1.exon2ATCC10864_002666-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002666-T1.exon1ATCC10864_002666-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF05236
InterProIPR007900
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:468697..470479 -
Powered by Drupal