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ATCC10864_002684-T1, ATCC10864_002684-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002684-T1
Unique NameATCC10864_002684-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:519438..520936+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002684-T1 ID=ATCC10864_002684-T1|Name=ATCC10864_002684-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1499bp|location=Sequence derived from alignment at MCQH01000053:519438..520936+ (Aspergillus niger ATCC 10864)
ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGT
TGAGTATGTTTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGG
CCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG
CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGT
CGCCCCTTATGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAG
TCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC
GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGGTATGCCCGTCTG
CGGGATCTACGCTCCCAGAAGCTTGGTTGAATATAGGGCTAACCGATCGA
CAAAACAGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCC
GTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCG
ATGATCAAAGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTT
CAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAG
CTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCG
CTCTCCCATGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAG
TCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGC
GTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCC
AGCGCGCTAACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGG
CAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAG
TTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAG
GCGGCCATGGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGC
TACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCA
TCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGC
ATGCGGTACATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGC
AGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGG
CCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGC
TACCACCACAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAA
CGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGA
TGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATG
CAGGGCCTGTTCACGGCCGAGGAGACAAGCCGGGTGATCGACGCGATCCA
TCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGA
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Coding sequence (CDS) from alignment at MCQH01000053:519438..520936+

>ATCC10864_002684-T1 ID=ATCC10864_002684-T1|Name=ATCC10864_002684-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2856bp|location=Sequence derived from alignment at MCQH01000053:519438..520936+ (Aspergillus niger ATCC 10864)
ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGT
TGAGTATGTTTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGG
CCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG
CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGT
CGCCCCTTATGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAG
TCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC
GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGATAACCTGGGCGC
CATCTTGGCGGTCACAGATTGGCTCAGCCGTACAGGCGCCACCAGCCAGC
CACTGACCGTCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATT
CAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCA
TACGCTACTCGTGAAGATCGCCTCCACAGCTGTTGTAGCTTGGTTGATGG
GTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGAT
GGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAA
GGGCTGGGCCGCTGGAGATGCCGCCATGCGTGCTGTACACTTGTGCTTAC
TAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAA
TGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACG
TCCTTTCAAGACCCGGGTGATGGAGGAAGTTTTCTTCAAACTCATCACTG
CAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAG
ACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGA
TATCCGCACGCATGAAGCGGCTGTACGCATCATCGACAAGCAAGGCCCGC
TCACCAATGCGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTG
GTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAG
CGTGTGGGCCCATGATCCGCGTGTTGAGGCCCTACGCCAGCGGATCCATA
TGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCC
GCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGT
AGTCGTCGAATACCCAATCGGGCATCCGATGCACGAAGATACTTTGCCTA
AGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAG
GAGACAAGCCGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCA
TCGATTGGTCGACCTGCTGGGCCGATGAATGTCTTCCACTTCCGATCGAC
AGTATGACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAA
GTGACCAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGC
TCTTGGTTGCGCGCTGGAGACTCTTCAGCAAAGCCCCGAGTGTCGCGCTC
TGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTG
CCGGGCACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGC
AACCTTGATTCGCTTCCTGGACCACAACGATGCATACCCTGGTGCTGAAT
GGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGG
CTCAGCCGTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCT
GATCGCGATGATCAAAGCCTACGAGATTCAAGGCTGCTACCAGATCCGCA
ATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCC
TCCACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGC
CGTCGCGCTCTCCCATGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCC
GTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCC
GCCATGCGTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGG
CATTCCCAGCGCGCTAACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCT
TTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATG
GAGGAAGTTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGC
AGTTCAGGCGGCCATGGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCG
ATCCTGCTACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCT
GTACGCATCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGA
TCACTGCATGCGGTACATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCA
TCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGT
GTTGAGGCCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCAC
CTACGGCTACCACCACAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTC
TGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGG
CATCCGATGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCG
AAACATGCAGGGCCTGTTCACGGCCGAGGAGACAAGCCGGGTGATCGACG
CGATCCATCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGC
CGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019679propionate metabolic process, methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002684ATCC10864_002684Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002684-T1.exon1ATCC10864_002684-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002684-T1.exon2ATCC10864_002684-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002684-T1.cdsATCC10864_002684-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002684-T1ATCC10864_002684-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03972
InterProIPR005656
InterProIPR042188
InterProIPR036148
InterProIPR012705
PFAMPF19305
InterProIPR042183
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:519438..520936 +
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