You are here

Home

ATCC10864_002742-T1, ATCC10864_002742-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002742-T1
Unique NameATCC10864_002742-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:678724..680847-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002742-T1 ID=ATCC10864_002742-T1|Name=ATCC10864_002742-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2124bp|location=Sequence derived from alignment at MCQH01000053:678724..680847- (Aspergillus niger ATCC 10864)
ATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTG
CCTTCGCCATCATGAGCGGCCAGGTTGATGCGCTCTATATCTATGATGAG
CAGAGGCACGCAGTTCCCTCCAATGTTCTGACTACCAGCAGTCACTGACC
TGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCG
CCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCG
CCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTT
CGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACG
GAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGA
GGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATG
ATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGC
AATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGAT
GGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGGTGAGTGCCCACCGTTA
CGGGATGGAGGTCACCATACTATTTACAGTGAACTGACGGCCTTCGTTAT
GCGCAGGTCATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAAT
CAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGA
GTAAGACACACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTC
CGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTA
CTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCG
TTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCC
GGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCG
AGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAG
GTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATAT
GGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGC
CGACTGGCTCAGACTTCGAGGTCCGCCTTATTCTCAACACAAACTTCCCG
GGATACTCATCCTCTAACCGACCTGGGGTCGGGCGTAGCGGATCAGGCAC
GTCTACACCCTCTTTCCTCGGGGGTGGAGGCGGCAACTCCTCGGCGCCAG
TGCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAAC
ATCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAA
CGGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCG
GAACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAG
CTGGACGACGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGG
CTACTACGACGCCAGCGCGTCTTACCAGAACCCTGAAGCAGACACGACGA
AACGCAAGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAGAAATCTTCT
TCCCGCGCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGCCTCAGCTTC
CTCGCCCGCTGAACACCTTTCCTTGAACCCCGAGGATCCCGAACAACTCG
AACATACGCCTACTCCTGAACCCGAACAATCCCAGACGCTAACACCCCCC
GTTCAATCATCTTCGCCGCAACCTCCACCGTCACTTCCCCGGTCACAGTC
ACAGTCGCAGAAACAATCACCCAGCCGAGCTTACTCTGATTCCTCCATCT
TCCTTTCGGCGCCCCGTAAAACCAAGACCCAACTAAACGCGACACTTATG
CCTAATTCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCTTCCCTCGGG
GCTCAAGGTAGAGAGCCTGAACATCGATCCGCGGCGGAGTCGCGGACTAG
GCGAGGGAGTGAAACCATATAAGGGAGTGAAATATATCTGTATGAGTCGG
AAGGGAGTGGAGCGGAGATGCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000053:678724..680847-

>ATCC10864_002742-T1 ID=ATCC10864_002742-T1|Name=ATCC10864_002742-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5949bp|location=Sequence derived from alignment at MCQH01000053:678724..680847- (Aspergillus niger ATCC 10864)
GTCATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAATCAGCCG
CCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGAGTAAGA
CACACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTCCGTGAC
GATGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTACTATCG
CCTTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCGTTAACA
GCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCCGGTATT
TCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCGAGCTCA
GTTTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAGGTGGAC
CTCATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATATGGAGAA
GCTTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGCCGACTG
GCTCAGACTTCGAGGTCCGCCTTATTCTCAACACAAACTTCCCGGGATAC
TCATCCTCTAACCGACCTGGGGTCGGGCGTAGCGGATCAGGCACGTCTAC
ACCCTCTTTCCTCGGGGGTGGAGGCGGCAACTCCTCGGCGCCAGTGCTAG
AAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAACATCACA
GACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAACGGCGT
ATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCGGAACGG
CGACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAGCTGGAC
GACGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGGCTACTA
CGACGCCAGCGCGTCTTACCAGAACCCTGAAGCAGACACGACGAAACGCA
AGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAGAAATCTTCTTCCCGC
GCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGCCTCAGCTTCCTCGCC
CGCTGAACACCTTTCCTTGAACCCCGAGGATCCCGAACAACTCGAACATA
CGCCTACTCCTGAACCCGAACAATCCCAGACGCTAACACCCCCCGTTCAA
TCATCTTCGCCGCAACCTCCACCGTCACTTCCCCGGTCACAGTCACAGTC
GCAGAAACAATCACCCAGCCGAGCTTACTCTGATTCCTCCATCTTCCTTT
CGGCGCCCCGTAAAACCAAGACCCAACTAAACGCGACACTTATGCCTAAT
TCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCTTCCCTCGGGGCTCAA
GGTAGAGAGCCTGAACATCGATCCGCGGCGGAGTCGCGGACTAGGCGAGG
GAGTGAAACCATATAAGGGAGTGAAATATATCTGTATGAGTCGGAAGGGA
GTGGAGCGGAGATGCTAGTCACTGACCTGTCCTCTTCCAGCAATCCGATC
GTCGAGCAGGTCTATCGCTCCCGTCCGCCCTCCGCATCGGCCATTCTTCC
CCTCTATAATGCCTATGCAGCTCCGCGCCCATCACTCATCTACTTTCCAA
ATACAACTCCGCCGGTGACAGTGTTTTCGGTAGTGCAGTCCAACCTACTG
TTTTTGGCGCTGTCCGAGGTTGACACGGAACCGCTGCTTGCCCTGGAATT
CATTCATCGGGTTGTTGATGTTCTCGAGGACTTCGTCGGGGCACCTTTGC
TTTCCACCAAGATCCAGGCGAATTATGATGTGGTTGCACAGCTTCTGCAC
GAAATGTGCGATGCGGGGATTGTCTGCAATACAGAGCCCAATGCGCTACA
GGAGGTAGTGGAAATGCCGGGGTGGATGGGGAAGCTGTTAGGCGGCGTTG
GATTGCCTGGATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCG
GGATAGGTTGCCTTCGCCATCATGAGCGGCCAGGTCATCCACACCGATTC
TGGGACAACCCAGTGCCATGAAGCAATCAGCCGCCGCCGCGACCCAAGGA
CCTGCGATCCCCTGGAGAAAGTCCGGAGTAAGACACACTTCCAACGAGCT
ATATGTTGATATTATTGAGTCACTTTCCGTGACGATGGCGCCATCAGGAC
GACTGCTCTCTGCAATGTCTTCCGGTACTATCGCCTTCACCGCCAAAATA
TCCGGTGTACCCGATCTGCTTCTTTCGTTAACAGCGCCCGGTGGTCAGAA
AGCCTTGGGACGCAAGCTGGAGCTGCCGGTATTTCACCCATGTGTGCGCT
TGGCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGTTTTGTACCACCAGAC
GGTCGGTTCATTCTTGCCGGATACGAGGTGGACCTCATGCCAACAGACCC
TACACTTGATCAACCCCCGAGTCATATGGAGAAGCTTTTCTTGCCGGCTA
TTGTGGACATCCGTAAATCGCTTGGGCCGACTGGCTCAGACTTCGAGGTC
CGCCTTATTCTCAACACAAACTTCCCGGGATACTCATCCTCTAACCGACC
TGGGGTCGGGCGTAGCGGATCAGGCACGTCTACACCCTCTTTCCTCGGGG
GTGGAGGCGGCAACTCCTCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGC
GTCCCGATCCCGAAGTCGGTCCGGAACATCACAGACATGCAAGCCAGCCG
AGGAGAGGCTTTATTCTCACCGGGCAACGGCGTATTAGAATGGCGCGTGC
CGACTAAAGATGCCGGCACAATCTCCGGAACGGCGACACTCCGGTGCACC
GTCGTAGGACACTACGCGGATGACGAGCTGGACGACGACGTCGAAGAACT
CGACGCAGACACCAACCTCCTGCAGGGCTACTACGACGCCAGCGCGTCTT
ACCAGAACCCTGAAGCAGACACGACGAAACGCAAGACTAAGAAAAAGAAG
AAGAAGAAGGTTGTCAAGAAATCTTCTTCCCGCGCAGCGGCAGCGGCAGC
GGCAGCAGAAGCAGAAGCCTCAGCTTCCTCGCCCGCTGAACACCTTTCCT
TGAACCCCGAGGATCCCGAACAACTCGAACATACGCCTACTCCTGAACCC
GAACAATCCCAGACGCTAACACCCCCCGTTCAATCATCTTCGCCGCAACC
TCCACCGTCACTTCCCCGGTCACAGTCACAGTCGCAGAAACAATCACCCA
GCCGAGCTTACTCTGATTCCTCCATCTTCCTTTCGGCGCCCCGTAAAACC
AAGACCCAACTAAACGCGACACTTATGCCTAATTCGGCGGCTGTGTCGTT
CTCTGTCCGTGGCTGGCTTCCCTCGGGGCTCAAGGTAGAGAGCCTGAACA
TCGATCCGCGGCGGAGTCGCGGACTAGGCGAGGGAGTGAAACCATATAAG
GGAGTGAAATATATCTGTATGAGTCGGAAGGGAGTGGAGCGGAGATGCTA
GTCACTGACCTGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCG
CTCCCGTCCGCCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATG
CAGCTCCGCGCCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTG
ACAGTGTTTTCGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGA
GGTTGACACGGAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTG
ATGTTCTCGAGGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAG
GCGAATTATGATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGG
GATTGTCTGCAATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGC
CGGGGTGGATGGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGATGACCA
CCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTGCCTTCGC
CATCATGAGCGGCCAGGTCATCCACACCGATTCTGGGACAACCCAGTGCC
ATGAAGCAATCAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAG
AAAGTCCGGAGTAAGACACACTTCCAACGAGCTATATGTTGATATTATTG
AGTCACTTTCCGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATG
TCTTCCGGTACTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCT
GCTTCTTTCGTTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGC
TGGAGCTGCCGGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAG
CACCCTGGCGAGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGC
CGGATACGAGGTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCC
CGAGTCATATGGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAA
TCGCTTGGGCCGACTGGCTCAGACTTCGAGGTCCGCCTTATTCTCAACAC
AAACTTCCCGGGATACTCATCCTCTAACCGACCTGGGGTCGGGCGTAGCG
GATCAGGCACGTCTACACCCTCTTTCCTCGGGGGTGGAGGCGGCAACTCC
TCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTC
GGTCCGGAACATCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCT
CACCGGGCAACGGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGC
ACAATCTCCGGAACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGC
GGATGACGAGCTGGACGACGACGTCGAAGAACTCGACGCAGACACCAACC
TCCTGCAGGGCTACTACGACGCCAGCGCGTCTTACCAGAACCCTGAAGCA
GACACGACGAAACGCAAGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAA
GAAATCTTCTTCCCGCGCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAG
CCTCAGCTTCCTCGCCCGCTGAACACCTTTCCTTGAACCCCGAGGATCCC
GAACAACTCGAACATACGCCTACTCCTGAACCCGAACAATCCCAGACGCT
AACACCCCCCGTTCAATCATCTTCGCCGCAACCTCCACCGTCACTTCCCC
GGTCACAGTCACAGTCGCAGAAACAATCACCCAGCCGAGCTTACTCTGAT
TCCTCCATCTTCCTTTCGGCGCCCCGTAAAACCAAGACCCAACTAAACGC
GACACTTATGCCTAATTCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGC
TTCCCTCGGGGCTCAAGGTAGAGAGCCTGAACATCGATCCGCGGCGGAGT
CGCGGACTAGGCGAGGGAGTGAAACCATATAAGGGAGTGAAATATATCTG
TATGAGTCGGAAGGGAGTGGAGCGGAGATGCTAGTCACTGACCTGTCCTC
TTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCGCCCTCCG
CATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCGCCCATCA
CTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTTCGGTAGT
GCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACGGAACCGC
TGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGAGGACTTC
GTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATGATGTGGT
TGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGCAATACAG
AGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGATGGGGAAG
CTGTTAGGCGGCGTTGGATTGCCTGGATGACCACCTCTGCCTACTACGTT
ACGCCCCCACCGGTCGGGATAGGTTGCCTTCGCCATCATGAGCGGCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002742ATCC10864_002742Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002742-T1ATCC10864_002742-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002742-T1.cdsATCC10864_002742-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002742-T1.exon3ATCC10864_002742-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002742-T1.exon2ATCC10864_002742-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002742-T1.exon1ATCC10864_002742-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036168
InterProIPR011012
PFAMPF00928
InterProIPR018240
InterProIPR028565
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:678724..680847 -
Powered by Drupal