You are here

Home

ATCC10864_002772-T1, ATCC10864_002772-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002772-T1
Unique NameATCC10864_002772-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:775106..776102+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002772-T1 ID=ATCC10864_002772-T1|Name=ATCC10864_002772-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=997bp|location=Sequence derived from alignment at MCQH01000053:775106..776102+ (Aspergillus niger ATCC 10864)
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCT
CCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGA
GCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGT
TAACATGCATGTATGTGGGAACTCACTCCATCGTCTTTTGTGATGATTGC
GGGAGGCACGCTGGTCGGGCCAGCTGTTGTGTTGTCCTCCGGTGTTCGAT
TCTACCTTGAGCTTCTGTCGCTCGCGAAGGAAAAGGATGTACTTGGGCTA
ACTAGCTTTCTCTTTTCTGAAATAGATCAAGGATGCGCTGGGCAATGACC
ACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCT
CCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTCACCACTCG
TCGTATGTTTATCTACCTTGATCATGTTGTATCTTGATGTGCCAGGGATA
CCAGGTGCTGTGTAATGTGCGTGTGTATGTGGTACTAACCAGACGACAAA
TAGACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATT
GGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAA
GCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTG
TCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACC
AACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGG
TATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACT
TCAGGTATGTTCTTTTCTATCGCTTCTTCCGTTGGGTCTGGTATTCGGGT
AATGTGGCTAACAGCTTTGGATTTGTAGATCCAAGCATCTTATCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000053:775106..776102+

>ATCC10864_002772-T1 ID=ATCC10864_002772-T1|Name=ATCC10864_002772-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2628bp|location=Sequence derived from alignment at MCQH01000053:775106..776102+ (Aspergillus niger ATCC 10864)
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCT
CCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGA
GCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGT
TAACATGCATATCAAGGATGCGCTGGGCAATGACCACGGTCGTCCTAAGG
ACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACTGCT
TTCGACGTTTGCTTTGACAACCAGCTCACCACTCGTCACGCCGTTGCCAA
CCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTG
ACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGAC
CTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTA
CCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACG
AGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTG
GGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCAAGCATCT
TATCTAGATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTC
TCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCT
GCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGA
CCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCC
AGGTTGTTAACATGCATATCAAGGATGCGCTGGGCAATGACCACGGTCGT
CCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGA
TACTGCTTTCGACGTTTGCTTTGACAACCAGCTCACCACTCGTCACGCCG
TTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGAT
GCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGA
GACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGA
TGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGC
ACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGT
TGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCA
AGCATCTTATCTAGATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTC
GGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGA
CCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTT
TCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGT
GATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTGGGCAATGACCA
CGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTC
CCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTCACCACTCGT
CACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGG
TGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGC
CTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTC
AGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAA
CGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTA
TGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTC
AGATCCAAGCATCTTATCTAGATGGCGGCCACCCGTCTCACAATGAGGTC
TTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGA
AGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAAC
TTCGTTTTCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAA
CAAGGGTGATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTGGGCA
ATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTC
ACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTCAC
CACTCGTCACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCG
ACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAG
CTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGA
GATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTG
ATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACT
ATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGC
TTACTTCAGATCCAAGCATCTTATCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV25ATCC10864_002772Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002772-T1.exon1ATCC10864_002772-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002772-T1.exon2ATCC10864_002772-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002772-T1.exon3ATCC10864_002772-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002772-T1.exon4ATCC10864_002772-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002772-T1.cdsATCC10864_002772-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002772-T1ATCC10864_002772-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015720
InterProIPR009038
PFAMPF01105
Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
Productvesicle coat component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:775106..776102 +
Powered by Drupal