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ATCC10864_002795-T1, ATCC10864_002795-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002795-T1
Unique NameATCC10864_002795-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:845944..846712-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002795-T1 ID=ATCC10864_002795-T1|Name=ATCC10864_002795-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=769bp|location=Sequence derived from alignment at MCQH01000053:845944..846712- (Aspergillus niger ATCC 10864)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTGTGCGTA
AAACACCTTTCAAACTCAACTTCAGGATCATAGCTCCCTCAATCTCCAAA
CCCGGAACCTCCCAGAGCTACCCTATCTAGATCCGAGCAAACAACCAAGC
TAACCACTGCAACCAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTT
TCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGG
TCTCCGCTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGG
TCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAA
CGCTTCTTCTGGTTGAGTCTGTACGTGACGCCTGCACTATGGATTGGCCT
CGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTG
TTGGTGAGTTTATCCTTGCACTCTTTCTCCCAGCAGGTATATAAGAAGCG
TGGATGCTAATTGTATACAGCCATTGCCCTCGCCTTGACCATCACCAACA
CTGTTGCGTTCTCCCGGTGCGATCGCTTCAGTCAGGCTTCCACCTTCGCG
AATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGGTGGCCTGCT
GGGCAGGCTTTTCAAGTAG
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Coding sequence (CDS) from alignment at MCQH01000053:845944..846712-

>ATCC10864_002795-T1 ID=ATCC10864_002795-T1|Name=ATCC10864_002795-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1737bp|location=Sequence derived from alignment at MCQH01000053:845944..846712- (Aspergillus niger ATCC 10864)
CCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTCTCCCGGTGC
GATCGCTTCAGTCAGGCTTCCACCTTCGCGAATAGTGCGCTTTCGGGTGG
AGTTATGAGTAACCTTGCGGGTGGCCTGCTGGGCAGGCTTTTCAAGTAGC
GTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTACTA
CCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGCTGGTGGAACG
AAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCGAT
CCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGTTGAG
TCTGTACGTGACGCCTGCACTATGGATTGGCCTCGCCATTTTGGCCATTA
TTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGATGGAACAACAACC
GCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGCCCATCCGA
TTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTACTGATGTAC
CTCTTCGGCGTGCTCTTTATCAAGAACTTCCATTGCCCTCGCCTTGACCA
TCACCAACACTGTTGCGTTCTCCCGGTGCGATCGCTTCAGTCAGGCTTCC
ACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGG
TGGCCTGCTGGGCAGGCTTTTCAAGTAGCGTCCTCGTCTTCATCATCACC
CTCCTCATCCTTTCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCG
CCGACTGGTCGGTCTCCGCTGGTGGAACGAAGTCAACACTTCCTCCGGCG
ACTCTACTTGGGTCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACC
GCCACGGACAAACGCTTCTTCTGGTTGAGTCTGTACGTGACGCCTGCACT
ATGGATTGGCCTCGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTT
GGTTGAGTCTTGTTGATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGA
ACTGAACTGGCGCCTCAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGG
GCTTTCGCATCGGCGCCCTACTGATGTACCTCTTCGGCGTGCTCTTTATC
AAGAACTTCCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTCT
CCCGGTGCGATCGCTTCAGTCAGGCTTCCACCTTCGCGAATAGTGCGCTT
TCGGGTGGAGTTATGAGTAACCTTGCGGGTGGCCTGCTGGGCAGGCTTTT
CAAGTAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGAT
TTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGCTG
GTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGT
CCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTC
TGGTTGAGTCTGTACGTGACGCCTGCACTATGGATTGGCCTCGCCATTTT
GGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGATGGAA
CAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGC
CCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTAC
TGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP23ATCC10864_002795Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002795-T1ATCC10864_002795-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002795-T1.cdsATCC10864_002795-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002795-T1.exon3ATCC10864_002795-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002795-T1.exon2ATCC10864_002795-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002795-T1.exon1ATCC10864_002795-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF05832
InterProIPR008564
Properties
Property NameValue
ProductGolgi apparatus membrane protein tvp23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:845944..846712 -
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