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ATCC10864_002832-T1, ATCC10864_002832-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002832-T1
Unique NameATCC10864_002832-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:940169..941728-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002832-T1 ID=ATCC10864_002832-T1|Name=ATCC10864_002832-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1560bp|location=Sequence derived from alignment at MCQH01000053:940169..941728- (Aspergillus niger ATCC 10864)
ATGGAACTCGAATTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCC
GTCCCAGGCATACGGTCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGG
GGCCCCAGTATAGCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGC
GGTGCCGCTAATCTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTC
CACTGCTACTGCTGCTACCACTTCAACAACTCCTGCCACTATCACAACCA
CAGTCCCTGCTCTTGCTTCCATACCTACAACTACTACAGCACCAGCAGGG
ACCAACAACCTCCAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAA
CAATGACGGCTGGTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCC
TTCTTCTCAGTCACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCT
GAGGTGACAGGGATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCG
TTTCGTCCATGAAGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGT
GCATCAAGACTGGACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCT
GACAGTAGCTCCTGTTTATTAGAAGCACATGGACATCCACACCTGATGAC
GACCGGAACTGCTCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAAC
GGAAGACAGTTTGTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACA
CGGGGGTCACAGTTACTCGATTCGTTTTTGGAACACAAAATTGAGAACAT
CCGGCTGAACCAGCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGT
TGAATTCGAGACCAGGGCAGACGTCAACGACAACGACGACCAGCACCACT
ACCACGACAACAACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTT
TGCACAACGAGATACATCAGTATCTGGAGAGGAGAATGAATCATCCGATA
CAGTCACCAATACGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTT
GGAGATCGGTTGCCGCAGACTGAAGACATGTCTCATATTGACGGGATTGA
GGTCATGACGGGTTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGA
GTACGGGAGTCCGTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCG
AATGCCGTTGCTGCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCA
ACAACAGCAGCAGCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCAC
AGCCCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGG
GAGTATATGTGCACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAA
AGGCCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGTGGATGTGAGTTCT
CCCCCTCCTTGATCATCTGACTATATAAATTCTGTATCAGTATTAACAGT
GAAATGTGAACAGTACGTTGGGCCAAGAAAGAGAAAAAACGCCAGGATTT
AGGGCCGTAG
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Coding sequence (CDS) from alignment at MCQH01000053:940169..941728-

>ATCC10864_002832-T1 ID=ATCC10864_002832-T1|Name=ATCC10864_002832-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2976bp|location=Sequence derived from alignment at MCQH01000053:940169..941728- (Aspergillus niger ATCC 10864)
TACGTTGGGCCAAGAAAGAGAAAAAACGCCAGGATTTAGGGCCGTAGATG
GAACTCGAATTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCCGTC
CCAGGCATACGGTCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGGGGC
CCCAGTATAGCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGCGGT
GCCGCTAATCTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTCCAC
TGCTACTGCTGCTACCACTTCAACAACTCCTGCCACTATCACAACCACAG
TCCCTGCTCTTGCTTCCATACCTACAACTACTACAGCACCAGCAGGGACC
AACAACCTCCAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAACAA
TGACGGCTGGTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCCTTC
TTCTCAGTCACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCTGAG
GTGACAGGGATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCGTTT
CGTCCATGAAGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGTGCA
TCAAGACTGGACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCTGAC
AGTAGCTCCTGTTTATTAGAAGCACATGGACATCCACACCTGATGACGAC
CGGAACTGCTCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAACGGA
AGACAGTTTGTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACACGG
GGGTCACAGTTACTCGATTCGTTTTTGGAACACAAAATTGAGAACATCCG
GCTGAACCAGCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGTTGA
ATTCGAGACCAGGGCAGACGTCAACGACAACGACGACCAGCACCACTACC
ACGACAACAACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTTTGC
ACAACGAGATACATCAGTATCTGGAGAGGAGAATGAATCATCCGATACAG
TCACCAATACGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTTGGA
GATCGGTTGCCGCAGACTGAAGACATGTCTCATATTGACGGGATTGAGGT
CATGACGGGTTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGAGTA
CGGGAGTCCGTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCGAAT
GCCGTTGCTGCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCAACA
ACAGCAGCAGCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCACAGC
CCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGGGAG
TATATGTGCACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAAAGG
CCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGTGGATTACGTTGGGCCA
AGAAAGAGAAAAAACGCCAGGATTTAGGGCCGTAGATGGAACTCGAATTC
CATCGAGGACGAAGAGTGGCGCAGAACCAGATTCCGTCCCAGGCATACGG
TCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGGGGCCCCAGTATAGCA
TGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGCGGTGCCGCTAATCTG
CTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTCCACTGCTACTGCTGC
TACCACTTCAACAACTCCTGCCACTATCACAACCACAGTCCCTGCTCTTG
CTTCCATACCTACAACTACTACAGCACCAGCAGGGACCAACAACCTCCAG
CACCCCACCCCCGACATAGGCCTTGCCGGCACCAACAATGACGGCTGGTC
TGCACGGGTACTAGACGAACTAAAGGACCTGCTCCTTCTTCTCAGTCACG
ATGGGCAGGTTCTATACGCGTCACCATCATGCTCTGAGGTGACAGGGATT
GAATCGCACATGCTAGAACAAAGCGATTTCTCCCGTTTCGTCCATGAAGA
CGACAAGCCTATCCTAGGCCACGAATTGGACGAGTGCATCAAGACTGGAC
GCGAAATACGATGTCACTTCCGGCTCTGTAGGCCTGACAGTAGCTCCTGT
TTATTAGAAGCACATGGACATCCACACCTGATGACGACCGGAACTGCTCC
TTCTGCGACCGCAGAATCATCCCAACAGCCGCAACGGAAGACAGTTTGTA
AAGGGATATTTCTCGTCTGTCGGCCATACCCAACACGGGGGTCACAGTTA
CTCGATTCGTTTTTGGAACACAAAATTGAGAACATCCGGCTGAACCAGCG
CATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGTTGAATTCGAGACCAG
GGCAGACGTCAACGACAACGACGACCAGCACCACTACCACGACAACAACG
CGCCAGACGTATGTCTCAACGACACAGACCTCGTTTGCACAACGAGATAC
ATCAGTATCTGGAGAGGAGAATGAATCATCCGATACAGTCACCAATACGG
ACGACGCCGATTCACGATCGTTTCTGGAGCAGGTTGGAGATCGGTTGCCG
CAGACTGAAGACATGTCTCATATTGACGGGATTGAGGTCATGACGGGTTT
GTACTACGGAGAAGGAGAACGTTCACAGGGATTGAGTACGGGAGTCCGTC
ATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCGAATGCCGTTGCTGCC
GGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCAACAACAGCAGCAGCA
GCAGCAGCAACCGTCGCAGGTGCAACCGCAATCACAGCCCAAGAACCCTG
CAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGGGAGTATATGTGCACG
GATTGCGGGACGTCGGATTCACCCGAGTGGAGGAAAGGCCCGGAAGGGCC
GAAGACCCTGTGTAACGCTTGTGGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002832ATCC10864_002832Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002832-T1ATCC10864_002832-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002832-T1.cdsATCC10864_002832-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002832-T1.exon2ATCC10864_002832-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002832-T1.exon1ATCC10864_002832-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035965
PFAMPF08447
InterProIPR013655
InterProIPR013088
PFAMPF00320
InterProIPR000014
InterProIPR000679
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:940169..941728 -
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