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ATCC10864_002884-T1, ATCC10864_002884-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002884-T1
Unique NameATCC10864_002884-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000054:66655..67435+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002884-T1 ID=ATCC10864_002884-T1|Name=ATCC10864_002884-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=781bp|location=Sequence derived from alignment at MCQH01000054:66655..67435+ (Aspergillus niger ATCC 10864)
ATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGATTTTTCTCG
AAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGATTTCAGGTC
TCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCC
AGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGC
CAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTTTTTGCAGC
CCCTGGGATGTGTGTGTTTTTGGAGATGGATTTGGCATGGTTTCTTTCTT
TCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGATTTGGGAGG
AAGATGCAAGAACCAGATCCAATCGACAAACATCCAATCCGAGATATCAG
GCACAACGAAACAATACTGGGAGAAATGGTTCTAACGCAGTCGTTTGATA
GGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCAAGGCTGAT
TCTAACCCGACATCTAACCCACTCGCTAAACTGAGAACAAGGTCATGGTC
GTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCG
CCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACG
GCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAG
CTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGG
TCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000054:66655..67435+

>ATCC10864_002884-T1 ID=ATCC10864_002884-T1|Name=ATCC10864_002884-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1620bp|location=Sequence derived from alignment at MCQH01000054:66655..67435+ (Aspergillus niger ATCC 10864)
ATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCGCGCGC
CGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCTGCTC
CTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGCCCATC
CGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCG
CGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTC
TGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGC
CCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGC
CGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGT
CGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCC
TCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGT
GAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAA
GTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCA
AGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATC
CTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTC
CATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACA
AGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATC
CACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCAT
CCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGG
ACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAG
GCCAAGTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCG
CCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCG
TTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTC
CGCTCCATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAG
CAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGG
CCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTC
CCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGA
CAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCG
TCAAGGCCAAGTCCGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL26AATCC10864_002884Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002884-T1.exon1ATCC10864_002884-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002884-T1.exon2ATCC10864_002884-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002884-T1.exon3ATCC10864_002884-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002884-T1.exon4ATCC10864_002884-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002884-T1.cdsATCC10864_002884-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002884-T1ATCC10864_002884-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005756
InterProIPR005824
InterProIPR041988
InterProIPR005825
PFAMPF16906
InterProIPR008991
InterProIPR014722
PFAMPF00467
Properties
Property NameValue
NoteBUSCO:EOG09265DAV
Product60S ribosomal protein L26A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000054supercontigMCQH01000054:66655..67435 +
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