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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000054:242403..242995+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002936-T1 ID=ATCC10864_002936-T1|Name=ATCC10864_002936-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=593bp|location=Sequence derived from alignment at MCQH01000054:242403..242995+ (Aspergillus niger ATCC 10864)
ATGAATGTGTCACTAGCAAGGTAGGTGGATCGCATTACCTCGCAACTGCG
GATGTACTAATCCAAACTGCAACAGACCAAACTCCCACAACTTCCTGATC
GAGAATATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCCCTGGG
TTCCAGTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACACCTGGG
ACTCGAACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCAATGTA
TCCAACATAGTGTTTGAGAATTTCATCGGTACATAACCTTATATCTTCCT
TACCCTTCCACGACACACAACCTAATGATAGAATAGGCCACGGAAACGTC
AACTCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGG
CGTCGGCATCTACTATCACAACATCACAATTTATAATTGGACGGGGACCG
CCATCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGAC
ATGCCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGA
AGGTCGTTACGATGAATACTACTGCGCGATTGCTTGCGGATAG back to topCoding sequence (CDS) from alignment at MCQH01000054:242403..242995+ >ATCC10864_002936-T1 ID=ATCC10864_002936-T1|Name=ATCC10864_002936-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1440bp|location=Sequence derived from alignment at MCQH01000054:242403..242995+ (Aspergillus niger ATCC 10864)
ATGAATGTGTCACTAGCAAGACCAAACTCCCACAACTTCCTGATCGAGAA
TATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCCCTGGGTTCCA
GTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACACCTGGGACTCG
AACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCAATGTATCCAA
CATAGTGTTTGAGAATTTCATCGGCCACGGAAACGTCAACTCCCTCGACC
TCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCGTCGGCATCTAC
TATCACAACATCACAATTTATAATTGGACGGGGACCGCCATCGACGGTGA
AACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACATGCCCTGTACCG
AGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAGGTCGTTACGAT
GAATACTACTGCGCGATTGCTTGCGGATAGATGAATGTGTCACTAGCAAG
ACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTG
GCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATC
CTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAA
GACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCA
TCGGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAGC
ATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATCACAATTTA
TAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGGG
TCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGATT
GACTTGTTGGTTGAGGAAGGTCGTTACGATGAATACTACTGCGCGATTGC
TTGCGGATAGATGAATGTGTCACTAGCAAGACCAAACTCCCACAACTTCC
TGATCGAGAATATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCC
CTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACAC
CTGGGACTCGAACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCA
ATGTATCCAACATAGTGTTTGAGAATTTCATCGGCCACGGAAACGTCAAC
TCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCGT
CGGCATCTACTATCACAACATCACAATTTATAATTGGACGGGGACCGCCA
TCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACATG
CCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAGG
TCGTTACGATGAATACTACTGCGCGATTGCTTGCGGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000743 |
| InterPro | IPR012334 |
| InterPro | IPR011050 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000054 | supercontig | MCQH01000054:242403..242995 + |
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