You are here

Home

ATCC10864_002938-T1, ATCC10864_002938-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002938-T1
Unique NameATCC10864_002938-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000054:258116..259369+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002938-T1 ID=ATCC10864_002938-T1|Name=ATCC10864_002938-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1254bp|location=Sequence derived from alignment at MCQH01000054:258116..259369+ (Aspergillus niger ATCC 10864)
ATGACTGTTCGCGACACAGTCTTGCTTCTTGTGAGCGTTGGTCGATTCGG
CTGCTTCGGTTATGGAGGTACGTGACACAGGCAGTTTCTTCCAAGCTTTT
CAAGAGCTCATCTGGCTAACGGTACGTTTAAGCTGCATCTCGCCGAGAGT
GCAGTGTATTTGAGCGAAGTTTAGTGAGTATTCCTGTCCTGTCCGATGCT
TCCATCGTCTTGCCAACCAGAGTATCAGGCTCTCTTCGAGAGTTCTACTT
CGTTACTTTCCCTGTGTATGTTTACGAGCCTCCAGTGGCTAAGGGTAGAT
GGCATCAACTGACAGGCGCTAGCGGCCTCTCTTCAAGAGTACGATCTATT
TTTCCGAACGTCTATAGAGGGTGCCTGTTCAGGCTCTCTCTTCGAGGGTC
CTGTCTTCTTTAGTCCCAGACGCCTGGTGAGCACTTTCTCTTCAAACATT
ATTTTATATCAACCTGCTGACATGGCTATCAGCCGCTATCCTCTTCGAGG
GTGCGGTGTATCTATTCGACCGTCTGTAGAGGGGCTCGCGCAAGCGCTCT
TCGAGCGTCTTGTCTTTTCCTTTTGTTCTTTAGTCCCAGACGTTTGGTGA
GCACTTCGTCTCCAATATTATGTTATATTAACCTGCTGACAAGAGTACTA
GCCGCTATCCTTTCGAGGGTGCGGTATATCTCAGCAGATATCGGTGAGTA
CACATATCCTTTTGCAAGGAAACAATAAAAGAAGAAATTCAATTAAACTT
ACTAACGATAATGCGAGTGTCTCTCTTCGAGAGTTCGATGGTCTGCTGGA
CCTTGTTGTAAGTGCTTCTGTCTTTCAGATTTACTCAGAACTTGGCTAAC
ATGGACCCCAGCCAGCTCTCTTAGAGAGTCTGGTCGCGTTATCCCAGCCG
CTATCTCCTTCGGGGTTGCGGGTTATCTTAGCAGATATCGGTGAGTACAC
TAGCCTATTTCCAAGCATCATGCCATGTCAACATACTGATGATAATATCA
GTGTCTCTCTTCGAGGGTCTGGTCTCCAACCCCTTGCCGTGTCTCCTCGA
GAGTCCGGCCTGCTTCTTGTGTGCGCTTGTGTAAGTATCCATCCCTCTCA
CTAAAAAATGGTTGGGGCATCTTGCTGATTTTGGCAGGCCGGCTCTCTTC
GAGAGTTCCGGTTGGTTATATTCTCTATCGACCGGTAGGTTTTCTATCAC
AAACTATACTTCTCAGCCACACATGGCACCTAACCATTGGCTGCTACAGA
CTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000054:258116..259369+

>ATCC10864_002938-T1 ID=ATCC10864_002938-T1|Name=ATCC10864_002938-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5454bp|location=Sequence derived from alignment at MCQH01000054:258116..259369+ (Aspergillus niger ATCC 10864)
ATGACTGTTCGCGACACAGTCTTGCTTCTTGTGAGCGTTGGTCGATTCGG
CTGCTTCGGTTATGGAGCTGCATCTCGCCGAGAGTGCAGTGTATTTGAGC
GAAGTTTAGTGAGTATTCCTGTCCTGTCCGATGCTTCCATCGTCTTGCCA
ACCAGAGTATCAGGCTCTCTTCGAGAGTTCTACTTCGTTACTTTCCCTGT
CCGCTATCCTCTTCGAGGGTGCGGTGTATCTATTCGACCGTCTGTAGAGG
GGCTCGCGCAAGCGCTCTTCGAGCGTCTTGTCTTTTCCTTTTGTTCTTTA
GTCCCAGACGTTTGCCGCTATCCTTTCGAGGGTGCGGTATATCTCAGCAG
ATATCGTGTCTCTCTTCGAGAGTTCGATGGTCTGCTGGACCTTGTTCCAG
CTCTCTTAGAGAGTCTGGTCGCGTTATCCCAGCCGCTATCTCCTTCGGGG
TTGCGGGTTATCTTAGCAGATATCGTGTCTCTCTTCGAGGGTCTGGTCTC
CAACCCCTTGCCGTGTCTCCTCGAGAGTCCGGCCTGCTTCTTGTGTGCGC
TTGTGCCGGCTCTCTTCGAGAGTTCCGGTTGGTTATATTCTCTATCGACC
GACTGAATGACTGTTCGCGACACAGTCTTGCTTCTTGTGAGCGTTGGTCG
ATTCGGCTGCTTCGGTTATGGAGCTGCATCTCGCCGAGAGTGCAGTGTAT
TTGAGCGAAGTTTAGTGAGTATTCCTGTCCTGTCCGATGCTTCCATCGTC
TTGCCAACCAGAGTATCAGGCTCTCTTCGAGAGTTCTACTTCGTTACTTT
CCCTGTCCGCTATCCTCTTCGAGGGTGCGGTGTATCTATTCGACCGTCTG
TAGAGGGGCTCGCGCAAGCGCTCTTCGAGCGTCTTGTCTTTTCCTTTTGT
TCTTTAGTCCCAGACGTTTGCCGCTATCCTTTCGAGGGTGCGGTATATCT
CAGCAGATATCGTGTCTCTCTTCGAGAGTTCGATGGTCTGCTGGACCTTG
TTCCAGCTCTCTTAGAGAGTCTGGTCGCGTTATCCCAGCCGCTATCTCCT
TCGGGGTTGCGGGTTATCTTAGCAGATATCGTGTCTCTCTTCGAGGGTCT
GGTCTCCAACCCCTTGCCGTGTCTCCTCGAGAGTCCGGCCTGCTTCTTGT
GTGCGCTTGTGCCGGCTCTCTTCGAGAGTTCCGGTTGGTTATATTCTCTA
TCGACCGACTGAATGACTGTTCGCGACACAGTCTTGCTTCTTGTGAGCGT
TGGTCGATTCGGCTGCTTCGGTTATGGAGCTGCATCTCGCCGAGAGTGCA
GTGTATTTGAGCGAAGTTTAGTGAGTATTCCTGTCCTGTCCGATGCTTCC
ATCGTCTTGCCAACCAGAGTATCAGGCTCTCTTCGAGAGTTCTACTTCGT
TACTTTCCCTGTCCGCTATCCTCTTCGAGGGTGCGGTGTATCTATTCGAC
CGTCTGTAGAGGGGCTCGCGCAAGCGCTCTTCGAGCGTCTTGTCTTTTCC
TTTTGTTCTTTAGTCCCAGACGTTTGCCGCTATCCTTTCGAGGGTGCGGT
ATATCTCAGCAGATATCGTGTCTCTCTTCGAGAGTTCGATGGTCTGCTGG
ACCTTGTTCCAGCTCTCTTAGAGAGTCTGGTCGCGTTATCCCAGCCGCTA
TCTCCTTCGGGGTTGCGGGTTATCTTAGCAGATATCGTGTCTCTCTTCGA
GGGTCTGGTCTCCAACCCCTTGCCGTGTCTCCTCGAGAGTCCGGCCTGCT
TCTTGTGTGCGCTTGTGCCGGCTCTCTTCGAGAGTTCCGGTTGGTTATAT
TCTCTATCGACCGACTGAATGACTGTTCGCGACACAGTCTTGCTTCTTGT
GAGCGTTGGTCGATTCGGCTGCTTCGGTTATGGAGCTGCATCTCGCCGAG
AGTGCAGTGTATTTGAGCGAAGTTTAGTGAGTATTCCTGTCCTGTCCGAT
GCTTCCATCGTCTTGCCAACCAGAGTATCAGGCTCTCTTCGAGAGTTCTA
CTTCGTTACTTTCCCTGTCCGCTATCCTCTTCGAGGGTGCGGTGTATCTA
TTCGACCGTCTGTAGAGGGGCTCGCGCAAGCGCTCTTCGAGCGTCTTGTC
TTTTCCTTTTGTTCTTTAGTCCCAGACGTTTGCCGCTATCCTTTCGAGGG
TGCGGTATATCTCAGCAGATATCGTGTCTCTCTTCGAGAGTTCGATGGTC
TGCTGGACCTTGTTCCAGCTCTCTTAGAGAGTCTGGTCGCGTTATCCCAG
CCGCTATCTCCTTCGGGGTTGCGGGTTATCTTAGCAGATATCGTGTCTCT
CTTCGAGGGTCTGGTCTCCAACCCCTTGCCGTGTCTCCTCGAGAGTCCGG
CCTGCTTCTTGTGTGCGCTTGTGCCGGCTCTCTTCGAGAGTTCCGGTTGG
TTATATTCTCTATCGACCGACTGAATGACTGTTCGCGACACAGTCTTGCT
TCTTGTGAGCGTTGGTCGATTCGGCTGCTTCGGTTATGGAGCTGCATCTC
GCCGAGAGTGCAGTGTATTTGAGCGAAGTTTAGTGAGTATTCCTGTCCTG
TCCGATGCTTCCATCGTCTTGCCAACCAGAGTATCAGGCTCTCTTCGAGA
GTTCTACTTCGTTACTTTCCCTGTCCGCTATCCTCTTCGAGGGTGCGGTG
TATCTATTCGACCGTCTGTAGAGGGGCTCGCGCAAGCGCTCTTCGAGCGT
CTTGTCTTTTCCTTTTGTTCTTTAGTCCCAGACGTTTGCCGCTATCCTTT
CGAGGGTGCGGTATATCTCAGCAGATATCGTGTCTCTCTTCGAGAGTTCG
ATGGTCTGCTGGACCTTGTTCCAGCTCTCTTAGAGAGTCTGGTCGCGTTA
TCCCAGCCGCTATCTCCTTCGGGGTTGCGGGTTATCTTAGCAGATATCGT
GTCTCTCTTCGAGGGTCTGGTCTCCAACCCCTTGCCGTGTCTCCTCGAGA
GTCCGGCCTGCTTCTTGTGTGCGCTTGTGCCGGCTCTCTTCGAGAGTTCC
GGTTGGTTATATTCTCTATCGACCGACTGAATGACTGTTCGCGACACAGT
CTTGCTTCTTGTGAGCGTTGGTCGATTCGGCTGCTTCGGTTATGGAGCTG
CATCTCGCCGAGAGTGCAGTGTATTTGAGCGAAGTTTAGTGAGTATTCCT
GTCCTGTCCGATGCTTCCATCGTCTTGCCAACCAGAGTATCAGGCTCTCT
TCGAGAGTTCTACTTCGTTACTTTCCCTGTCCGCTATCCTCTTCGAGGGT
GCGGTGTATCTATTCGACCGTCTGTAGAGGGGCTCGCGCAAGCGCTCTTC
GAGCGTCTTGTCTTTTCCTTTTGTTCTTTAGTCCCAGACGTTTGCCGCTA
TCCTTTCGAGGGTGCGGTATATCTCAGCAGATATCGTGTCTCTCTTCGAG
AGTTCGATGGTCTGCTGGACCTTGTTCCAGCTCTCTTAGAGAGTCTGGTC
GCGTTATCCCAGCCGCTATCTCCTTCGGGGTTGCGGGTTATCTTAGCAGA
TATCGTGTCTCTCTTCGAGGGTCTGGTCTCCAACCCCTTGCCGTGTCTCC
TCGAGAGTCCGGCCTGCTTCTTGTGTGCGCTTGTGCCGGCTCTCTTCGAG
AGTTCCGGTTGGTTATATTCTCTATCGACCGACTGAATGACTGTTCGCGA
CACAGTCTTGCTTCTTGTGAGCGTTGGTCGATTCGGCTGCTTCGGTTATG
GAGCTGCATCTCGCCGAGAGTGCAGTGTATTTGAGCGAAGTTTAGTGAGT
ATTCCTGTCCTGTCCGATGCTTCCATCGTCTTGCCAACCAGAGTATCAGG
CTCTCTTCGAGAGTTCTACTTCGTTACTTTCCCTGTCCGCTATCCTCTTC
GAGGGTGCGGTGTATCTATTCGACCGTCTGTAGAGGGGCTCGCGCAAGCG
CTCTTCGAGCGTCTTGTCTTTTCCTTTTGTTCTTTAGTCCCAGACGTTTG
CCGCTATCCTTTCGAGGGTGCGGTATATCTCAGCAGATATCGTGTCTCTC
TTCGAGAGTTCGATGGTCTGCTGGACCTTGTTCCAGCTCTCTTAGAGAGT
CTGGTCGCGTTATCCCAGCCGCTATCTCCTTCGGGGTTGCGGGTTATCTT
AGCAGATATCGTGTCTCTCTTCGAGGGTCTGGTCTCCAACCCCTTGCCGT
GTCTCCTCGAGAGTCCGGCCTGCTTCTTGTGTGCGCTTGTGCCGGCTCTC
TTCGAGAGTTCCGGTTGGTTATATTCTCTATCGACCGACTGAATGACTGT
TCGCGACACAGTCTTGCTTCTTGTGAGCGTTGGTCGATTCGGCTGCTTCG
GTTATGGAGCTGCATCTCGCCGAGAGTGCAGTGTATTTGAGCGAAGTTTA
GTGAGTATTCCTGTCCTGTCCGATGCTTCCATCGTCTTGCCAACCAGAGT
ATCAGGCTCTCTTCGAGAGTTCTACTTCGTTACTTTCCCTGTCCGCTATC
CTCTTCGAGGGTGCGGTGTATCTATTCGACCGTCTGTAGAGGGGCTCGCG
CAAGCGCTCTTCGAGCGTCTTGTCTTTTCCTTTTGTTCTTTAGTCCCAGA
CGTTTGCCGCTATCCTTTCGAGGGTGCGGTATATCTCAGCAGATATCGTG
TCTCTCTTCGAGAGTTCGATGGTCTGCTGGACCTTGTTCCAGCTCTCTTA
GAGAGTCTGGTCGCGTTATCCCAGCCGCTATCTCCTTCGGGGTTGCGGGT
TATCTTAGCAGATATCGTGTCTCTCTTCGAGGGTCTGGTCTCCAACCCCT
TGCCGTGTCTCCTCGAGAGTCCGGCCTGCTTCTTGTGTGCGCTTGTGCCG
GCTCTCTTCGAGAGTTCCGGTTGGTTATATTCTCTATCGACCGACTGAAT
GACTGTTCGCGACACAGTCTTGCTTCTTGTGAGCGTTGGTCGATTCGGCT
GCTTCGGTTATGGAGCTGCATCTCGCCGAGAGTGCAGTGTATTTGAGCGA
AGTTTAGTGAGTATTCCTGTCCTGTCCGATGCTTCCATCGTCTTGCCAAC
CAGAGTATCAGGCTCTCTTCGAGAGTTCTACTTCGTTACTTTCCCTGTCC
GCTATCCTCTTCGAGGGTGCGGTGTATCTATTCGACCGTCTGTAGAGGGG
CTCGCGCAAGCGCTCTTCGAGCGTCTTGTCTTTTCCTTTTGTTCTTTAGT
CCCAGACGTTTGCCGCTATCCTTTCGAGGGTGCGGTATATCTCAGCAGAT
ATCGTGTCTCTCTTCGAGAGTTCGATGGTCTGCTGGACCTTGTTCCAGCT
CTCTTAGAGAGTCTGGTCGCGTTATCCCAGCCGCTATCTCCTTCGGGGTT
GCGGGTTATCTTAGCAGATATCGTGTCTCTCTTCGAGGGTCTGGTCTCCA
ACCCCTTGCCGTGTCTCCTCGAGAGTCCGGCCTGCTTCTTGTGTGCGCTT
GTGCCGGCTCTCTTCGAGAGTTCCGGTTGGTTATATTCTCTATCGACCGA
CTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002938ATCC10864_002938Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002938-T1ATCC10864_002938-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002938-T1.exon1ATCC10864_002938-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon2ATCC10864_002938-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon3ATCC10864_002938-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon4ATCC10864_002938-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon5ATCC10864_002938-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon6ATCC10864_002938-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon7ATCC10864_002938-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon8ATCC10864_002938-T1.exon8Aspergillus niger ATCC 10864exon
ATCC10864_002938-T1.exon9ATCC10864_002938-T1.exon9Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002938-T1.cdsATCC10864_002938-T1.cdsAspergillus niger ATCC 10864CDS


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000054supercontigMCQH01000054:258116..259369 +
Powered by Drupal