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ATCC10864_002960-T1, ATCC10864_002960-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002960-T1
Unique NameATCC10864_002960-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000057:16021..17017-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002960-T1 ID=ATCC10864_002960-T1|Name=ATCC10864_002960-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=997bp|location=Sequence derived from alignment at MCQH01000057:16021..17017- (Aspergillus niger ATCC 10864)
ATGCCCCGCCCAACAACCCGACAAGAAGTCCTCGCCCGTCTACGCAAGAC
CATCGCCGATGGTTCCATCATCATCGGTGCGGGAGCCGGTATGTACCCAT
CCCTTCCTCAAGCTATACCCTCACTTACTACTATCTCCCCCGTACATCCA
ATCAACACCGACTAACCATATCAATGACATGAAATGTAGGAATCGGCCTC
TCCGCCAAATTCATCGAAAAAGGCGGCGCCGACCTCATCCTCGTCTACAA
CTCGGGCCGATTTCGCATGGCGGGCCGAGGCTCTCTCGCAGGGATGATGC
CCTACTCTGACGCCAACGCCGTGGTCGTAGAGATGGTATCCCCATCCCAT
CCCCCCACCTAGCACTCATAACTAGATACTAACTGAAATTGAACCAGTCC
AACGAAGTCCTCCCCCTCATCCAAAACACCCCCGTCCTGGCGGGCGTGTG
TGGCACTGACCCCTTCCGGGACATGCGGACCTTCCTGCGCCAACTACGGG
ACATCGGGTTCGTCGGCGTGCAAAACTTCCCGACAGTCGGGCTGATCGAC
GGGAACTTCCGCGCGAACCTCGAAGAAACGGGGATGGGGTATGAGAAAGA
GGTGGAGATGATTCGGATCGCACGGGAAATGGATCTGGTGACGACGCCGT
ACGTGTTTAACGTGAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCGGAT
GTGATTGTGGTGCATGTGGGATTGACGACGAGTGGGACGATTGGAGCGCA
GACGGCGTTGACGTTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGCGGG
ATGCGGTGGTGAAGGTCAATCCGGAGGTGATTGTGTTGTGTCATGGAGGG
CCGTTGGCGGGGCCGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCAGGG
GGTGCATGGGTTCTTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGGAGG
TGGCGTTGGAGGAGAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAA
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Coding sequence (CDS) from alignment at MCQH01000057:16021..17017-

>ATCC10864_002960-T1 ID=ATCC10864_002960-T1|Name=ATCC10864_002960-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2502bp|location=Sequence derived from alignment at MCQH01000057:16021..17017- (Aspergillus niger ATCC 10864)
TCCAACGAAGTCCTCCCCCTCATCCAAAACACCCCCGTCCTGGCGGGCGT
GTGTGGCACTGACCCCTTCCGGGACATGCGGACCTTCCTGCGCCAACTAC
GGGACATCGGGTTCGTCGGCGTGCAAAACTTCCCGACAGTCGGGCTGATC
GACGGGAACTTCCGCGCGAACCTCGAAGAAACGGGGATGGGGTATGAGAA
AGAGGTGGAGATGATTCGGATCGCACGGGAAATGGATCTGGTGACGACGC
CGTACGTGTTTAACGTGAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCG
GATGTGATTGTGGTGCATGTGGGATTGACGACGAGTGGGACGATTGGAGC
GCAGACGGCGTTGACGTTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGC
GGGATGCGGTGGTGAAGGTCAATCCGGAGGTGATTGTGTTGTGTCATGGA
GGGCCGTTGGCGGGGCCGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCA
GGGGGTGCATGGGTTCTTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGG
AGGTGGCGTTGGAGGAGAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAA
GAATCGGCCTCTCCGCCAAATTCATCGAAAAAGGCGGCGCCGACCTCATC
CTCGTCTACAACTCGGGCCGATTTCGCATGGCGGGCCGAGGCTCTCTCGC
AGGGATGATGCCCTACTCTGACGCCAACGCCGTGGTCGTAGAGATGATGC
CCCGCCCAACAACCCGACAAGAAGTCCTCGCCCGTCTACGCAAGACCATC
GCCGATGGTTCCATCATCATCGGTGCGGGAGCCGTCCAACGAAGTCCTCC
CCCTCATCCAAAACACCCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCC
TTCCGGGACATGCGGACCTTCCTGCGCCAACTACGGGACATCGGGTTCGT
CGGCGTGCAAAACTTCCCGACAGTCGGGCTGATCGACGGGAACTTCCGCG
CGAACCTCGAAGAAACGGGGATGGGGTATGAGAAAGAGGTGGAGATGATT
CGGATCGCACGGGAAATGGATCTGGTGACGACGCCGTACGTGTTTAACGT
GAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGC
ATGTGGGATTGACGACGAGTGGGACGATTGGAGCGCAGACGGCGTTGACG
TTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAA
GGTCAATCCGGAGGTGATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGC
CGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTC
TTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGA
GAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAAGAATCGGCCTCTCCGC
CAAATTCATCGAAAAAGGCGGCGCCGACCTCATCCTCGTCTACAACTCGG
GCCGATTTCGCATGGCGGGCCGAGGCTCTCTCGCAGGGATGATGCCCTAC
TCTGACGCCAACGCCGTGGTCGTAGAGATGATGCCCCGCCCAACAACCCG
ACAAGAAGTCCTCGCCCGTCTACGCAAGACCATCGCCGATGGTTCCATCA
TCATCGGTGCGGGAGCCGTCCAACGAAGTCCTCCCCCTCATCCAAAACAC
CCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCCTTCCGGGACATGCGGA
CCTTCCTGCGCCAACTACGGGACATCGGGTTCGTCGGCGTGCAAAACTTC
CCGACAGTCGGGCTGATCGACGGGAACTTCCGCGCGAACCTCGAAGAAAC
GGGGATGGGGTATGAGAAAGAGGTGGAGATGATTCGGATCGCACGGGAAA
TGGATCTGGTGACGACGCCGTACGTGTTTAACGTGAAGGAAGGGGAGATG
ATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGCATGTGGGATTGACGAC
GAGTGGGACGATTGGAGCGCAGACGGCGTTGACGTTGGATGAGTGTGTGA
AGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTG
ATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTA
TGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTA
TGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTT
AAGGAGATTCAGTTGTAAGAATCGGCCTCTCCGCCAAATTCATCGAAAAA
GGCGGCGCCGACCTCATCCTCGTCTACAACTCGGGCCGATTTCGCATGGC
GGGCCGAGGCTCTCTCGCAGGGATGATGCCCTACTCTGACGCCAACGCCG
TGGTCGTAGAGATGATGCCCCGCCCAACAACCCGACAAGAAGTCCTCGCC
CGTCTACGCAAGACCATCGCCGATGGTTCCATCATCATCGGTGCGGGAGC
CG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TM1ATCC10864_002960Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002960-T1ATCC10864_002960-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002960-T1.cdsATCC10864_002960-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002960-T1.exon3ATCC10864_002960-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002960-T1.exon2ATCC10864_002960-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002960-T1.exon1ATCC10864_002960-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015813
PFAMPF09370
InterProIPR009215
InterProIPR013785
Properties
Property NameValue
ProductToMV susceptible protein tm-1(GCR26)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000057supercontigMCQH01000057:16021..17017 -
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