You are here

Home

ATCC10864_002961-T1, ATCC10864_002961-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002961-T1
Unique NameATCC10864_002961-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000057:17709..19111+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002961-T1 ID=ATCC10864_002961-T1|Name=ATCC10864_002961-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1403bp|location=Sequence derived from alignment at MCQH01000057:17709..19111+ (Aspergillus niger ATCC 10864)
ATGCCGACCATCCTCCTCCTCGGCACCTGCGACACAAAATGGTCCGAACT
CCTCTACCTCCACTCCCAACTAACCTCTAACCCCTCCATCTCCGTCCTTC
TCATGGACGTCGGCCGCGCCGCCACCTCCTCCCCTCTCATCAACATTCCT
CATCCCAGCCTCAACAACAACAACAACAACAACAACAAAACAATCGACTA
CACCCAACTCTCCCGAAACGACTACATCCAAACCATCACCCACCAATCCA
CCCCCACCGTCACCGACCTCTACCACCATGGCAAAATCCACTCCATCCTC
GCCATCGGCGGCAGCTGCGGCACCACCATCGCAACCGCCATCATGCGCGA
TGCCCTCCCCATCGGCTTCCCCAAACTCATGGTCTCCACCATGGCCTCCG
GCGACGTGGGGCCCTACATCCAGGAAACAGACATCACCATGATGTACAGT
GTCGTCGATGTAGCGGGTACAAACAGCATCTTGAATAGAATTCTCCGCAA
TGCAGCGGCTGCAGGGACCGGCATGGCCATATCATACTGCGACTACATTA
CCTCCGAGACTACCATCGCCACAAACGGACATACCAAGATAAACCCGAAA
GAACAAGAAAAGAAAACCAAAATCGGCATCACCATGTTCGGCGTAACCAC
CCCCGCGGTCACCCAAATCCGCAGCTACCTCGAATCCCACCTTCCCAACC
AATGTGAAATCTACGTTTTCCATGCCACCGGCTCGGGCGGAAAAGCCATG
GAGCGCCTCATCCGCGAGCAACAACTCGACGCCATCGTGGACCTGACCAC
CTCCGAGATCGTGGATGAGCTCGCCGGCGGGGTATTATCCGCCGGTCCGG
GCAGGTTAGAGGCCGCTGCGGAGAGGGGCATCCCGCAGGTAGTGAGTGTG
GGGGCATGCGATATGATTAATTTTGGGACGAAGGATACAATTCCCGAACG
GTTCAAGGGGCGGAGGATCTATGAGCATAATCCGACGGTGACGATTGTGA
GGACGGATGAGGAGGAGAATCGACGAGTCGGGGAGTTTATTGTGGGGAAG
TTGAGGAAGGCGAAGTGGCCCGGGAATGTGGTGGTGATGTTGCCCACTGG
GGGAGTCAGTATGATGGATGTTCCGGGGAATGAGTTCTATGATGGGGATG
CGGATGAGGTGTTGTTTGGGACGGTGGAGAGGGGGTTAGAGGGGTCGGGG
GTGAGGGTTGTGAGGTGTGAGGGGGATGTGAATTGTAAGGAGTTTGCAGA
GGATGTGGGGGAGACGTTATTGGGGTTGTTGAAGAATGTATAGATATTAG
TTTGGAACTGAATTAGGGTATATGTTAACTTTATACTGTGTAGATCAAAG
TTACTACAATTGCATATCTCAATGTTGGTGCCGCCGGAGAACCAATGGGG
TAA
back to top

Coding sequence (CDS) from alignment at MCQH01000057:17709..19111+

>ATCC10864_002961-T1 ID=ATCC10864_002961-T1|Name=ATCC10864_002961-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2694bp|location=Sequence derived from alignment at MCQH01000057:17709..19111+ (Aspergillus niger ATCC 10864)
ATGCCGACCATCCTCCTCCTCGGCACCTGCGACACAAAATGGTCCGAACT
CCTCTACCTCCACTCCCAACTAACCTCTAACCCCTCCATCTCCGTCCTTC
TCATGGACGTCGGCCGCGCCGCCACCTCCTCCCCTCTCATCAACATTCCT
CATCCCAGCCTCAACAACAACAACAACAACAACAACAAAACAATCGACTA
CACCCAACTCTCCCGAAACGACTACATCCAAACCATCACCCACCAATCCA
CCCCCACCGTCACCGACCTCTACCACCATGGCAAAATCCACTCCATCCTC
GCCATCGGCGGCAGCTGCGGCACCACCATCGCAACCGCCATCATGCGCGA
TGCCCTCCCCATCGGCTTCCCCAAACTCATGGTCTCCACCATGGCCTCCG
GCGACGTGGGGCCCTACATCCAGGAAACAGACATCACCATGATGTACAGT
GTCGTCGATGTAGCGGGTACAAACAGCATCTTGAATAGAATTCTCCGCAA
TGCAGCGGCTGCAGGGACCGGCATGGCCATATCATACTGCGACTACATTA
CCTCCGAGACTACCATCGCCACAAACGGACATACCAAGATAAACCCGAAA
GAACAAGAAAAGAAAACCAAAATCGGCATCACCATGTTCGGCGTAACCAC
CCCCGCGGTCACCCAAATCCGCAGCTACCTCGAATCCCACCTTCCCAACC
AATGTGAAATCTACGTTTTCCATGCCACCGGCTCGGGCGGAAAAGCCATG
GAGCGCCTCATCCGCGAGCAACAACTCGACGCCATCGTGGACCTGACCAC
CTCCGAGATCGTGGATGAGCTCGCCGGCGGGGTATTATCCGCCGGTCCGG
GCAGGTTAGAGGCCGCTGCGGAGAGGGGCATCCCGCAGGTAGTGAGTGTG
GGGGCATGCGATATGATTAATTTTGGGACGAAGGATACAATTCCCGAACG
GTTCAAGGGGCGGAGGATCTATGAGCATAATCCGACGGTGACGATTGTGA
GGACGGATGAGGAGGAGAATCGACGAGTCGGGGAGTTTATTGTGGGGAAG
TTGAGGAAGGCGAAGTGGCCCGGGAATGTGGTGGTGATGTTGCCCACTGG
GGGAGTCAGTATGATGGATGTTCCGGGGAATGAGTTCTATGATGGGGATG
CGGATGAGGTGTTGTTTGGGACGGTGGAGAGGGGGTTAGAGGGGTCGGGG
GTGAGGGTTGTGAGGTGTGAGGGGGATGTGAATTGTAAGGAGTTTGCAGA
GGATGTGGGGGAGACGTTATTGGGGTTGTTGAAGAATATCAAAGTTACTA
CAATTGCATATCTCAATGTTGGTGCCGCCGGAGAACCAATGGGGTAAATG
CCGACCATCCTCCTCCTCGGCACCTGCGACACAAAATGGTCCGAACTCCT
CTACCTCCACTCCCAACTAACCTCTAACCCCTCCATCTCCGTCCTTCTCA
TGGACGTCGGCCGCGCCGCCACCTCCTCCCCTCTCATCAACATTCCTCAT
CCCAGCCTCAACAACAACAACAACAACAACAACAAAACAATCGACTACAC
CCAACTCTCCCGAAACGACTACATCCAAACCATCACCCACCAATCCACCC
CCACCGTCACCGACCTCTACCACCATGGCAAAATCCACTCCATCCTCGCC
ATCGGCGGCAGCTGCGGCACCACCATCGCAACCGCCATCATGCGCGATGC
CCTCCCCATCGGCTTCCCCAAACTCATGGTCTCCACCATGGCCTCCGGCG
ACGTGGGGCCCTACATCCAGGAAACAGACATCACCATGATGTACAGTGTC
GTCGATGTAGCGGGTACAAACAGCATCTTGAATAGAATTCTCCGCAATGC
AGCGGCTGCAGGGACCGGCATGGCCATATCATACTGCGACTACATTACCT
CCGAGACTACCATCGCCACAAACGGACATACCAAGATAAACCCGAAAGAA
CAAGAAAAGAAAACCAAAATCGGCATCACCATGTTCGGCGTAACCACCCC
CGCGGTCACCCAAATCCGCAGCTACCTCGAATCCCACCTTCCCAACCAAT
GTGAAATCTACGTTTTCCATGCCACCGGCTCGGGCGGAAAAGCCATGGAG
CGCCTCATCCGCGAGCAACAACTCGACGCCATCGTGGACCTGACCACCTC
CGAGATCGTGGATGAGCTCGCCGGCGGGGTATTATCCGCCGGTCCGGGCA
GGTTAGAGGCCGCTGCGGAGAGGGGCATCCCGCAGGTAGTGAGTGTGGGG
GCATGCGATATGATTAATTTTGGGACGAAGGATACAATTCCCGAACGGTT
CAAGGGGCGGAGGATCTATGAGCATAATCCGACGGTGACGATTGTGAGGA
CGGATGAGGAGGAGAATCGACGAGTCGGGGAGTTTATTGTGGGGAAGTTG
AGGAAGGCGAAGTGGCCCGGGAATGTGGTGGTGATGTTGCCCACTGGGGG
AGTCAGTATGATGGATGTTCCGGGGAATGAGTTCTATGATGGGGATGCGG
ATGAGGTGTTGTTTGGGACGGTGGAGAGGGGGTTAGAGGGGTCGGGGGTG
AGGGTTGTGAGGTGTGAGGGGGATGTGAATTGTAAGGAGTTTGCAGAGGA
TGTGGGGGAGACGTTATTGGGGTTGTTGAAGAATATCAAAGTTACTACAA
TTGCATATCTCAATGTTGGTGCCGCCGGAGAACCAATGGGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002961ATCC10864_002961Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002961-T1.exon1ATCC10864_002961-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002961-T1.exon2ATCC10864_002961-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002961-T1.cdsATCC10864_002961-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002961-T1ATCC10864_002961-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF06792
InterProIPR044122
InterProIPR008322
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000057supercontigMCQH01000057:17709..19111 +
Powered by Drupal