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ATCC10864_003012-T1, ATCC10864_003012-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003012-T1
Unique NameATCC10864_003012-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:131756..132893+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003012-T1 ID=ATCC10864_003012-T1|Name=ATCC10864_003012-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1138bp|location=Sequence derived from alignment at MCQH01000058:131756..132893+ (Aspergillus niger ATCC 10864)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGGTTAGTTTCCCCTCGTTTGGATAGAC
ATTGCAACATGCTGACTATCTCACAGTCTCAAGGCGACCCGGAAGATATG
GATGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGA
CAATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGT
TCGGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGG
TCGTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTT
AGACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAG
CGCTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCAT
GCGCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCAT
CATTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGA
CTGTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCT
TACGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGA
ACAATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTA
CGATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGC
GAGAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCG
CGAAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGA
AGCAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACC
AAGGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGA
GATGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCG
GTGGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAG
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Coding sequence (CDS) from alignment at MCQH01000058:131756..132893+

>ATCC10864_003012-T1 ID=ATCC10864_003012-T1|Name=ATCC10864_003012-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2172bp|location=Sequence derived from alignment at MCQH01000058:131756..132893+ (Aspergillus niger ATCC 10864)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGTCTCAAGGCGACCCGGAAGATATGGA
TGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGACA
ATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTC
GGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTC
GTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAG
ACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCG
CTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGC
GCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCATCA
TTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACT
GTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTA
CGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAAC
AATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACG
ATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGA
GAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCG
AAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAG
CAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACCAA
GGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGA
TGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGT
GGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAGATGGCTATCTCAGA
CCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGACGACGAGGAGCTTT
ACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACGATCTCCGCTCTGAC
GAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTAGACGAAGACGACGA
CGACGATGTGTCTCAAGGCGACCCGGAAGATATGGATGATGACGACGATG
ACGACGATGACGACGACGAAGATGACGAAGACGACAATGATGATGCCCAG
GACGACGTTCAAGCCTCACTAAGCAGTATCTCGTTCGGCGCATTGGCGAA
AGCGCAAGCATCTATAGGACCCAAATCAAAGCGGTCGTCCAAGGCCTCCC
GGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTTAGACGACATTCGGGCG
CGGATTCAAGAGGCACGCGAACAGAAACGCCAAGCGCTGGCGAAAAATAA
GGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCATGCGCCGGCCGTACAAT
CCTCCAAACATGCCGTCTCCCGCAAACGGACCATCATTGAGCCGCCAAGT
GTACCCAAGTCGCGAGACCCCCGTTTTGACCCGACTGTCCTGAGCCAGGG
TGGTCGCGGAAACCCTCAAGGAACGAGCAACGCTTACGCATTCTTGGACG
AGTATCGCCGGGACGAACTGAAGCAGTTGAAGGAACAATACGCCAAGACG
AAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTACGATTCGGTCGACTCA
AGACCGTCTTCGAGCGATGGAGAATAGGAAACGCGAGAAGGAGATCTTAG
CGGAGCATAAGAAGAAGGAGAAACAGCTCATCCGCGAAGGAAAGAAGAGC
AACCCGTACTTCTTGAAGAAGTCGGACCTGAAGAAGCAGGTGCTGCTCAA
GAAGTACGAGAATATGAACTCCAAGGACCGCACCAAGGCACTCGAGAGGA
AGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGAGATGCCCATGGAGCGG
AGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCGGTGGAGGTGGCGGCTG
GAAACGCCGCAGAGTTGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000469cleavage involved in rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RRP36ATCC10864_003012Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003012-T1.exon1ATCC10864_003012-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003012-T1.exon2ATCC10864_003012-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003012-T1.cdsATCC10864_003012-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003012-T1ATCC10864_003012-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF06102
InterProIPR009292
Properties
Property NameValue
NoteBUSCO:EOG09265M98
ProductrRNA bioproteinsis protein rrp36
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:131756..132893 +
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