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ATCC10864_003016-T1, ATCC10864_003016-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003016-T1
Unique NameATCC10864_003016-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:145815..146533+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003016-T1 ID=ATCC10864_003016-T1|Name=ATCC10864_003016-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=719bp|location=Sequence derived from alignment at MCQH01000058:145815..146533+ (Aspergillus niger ATCC 10864)
ATGGCGCCGACTAAGGGCTCCGGCAGTGGCAAGGCCTCGAACAAGGGCGA
CGCAAAGAAGAGCAAGCCTCTCTCGTCCGCATCGAAAGTGAACAAGAAAA
CCGCCAAGCGCCCGCCGCCCAAGGAAGTCAAGTCGAAGGCGCGCACAGAG
TCTAGCCTGCTGAAGAAGACGAAGAAGAGAGAATATACGGAGGAGGAGCT
GGGACTGCCCAAGCTGAATGCGATCACCCCCGTCGGTGTGGTAAAGCCCA
AGGGCAAGAAGAAGGGCAAGACTTTCGTTGACGATGCGGTACGTGTTCCA
TCTACTTTTTAGGCCGTTCTATGAATGTCGCATTGGCTAACGATGTTACA
ATAGGAGGGAATGATGACTATCCTCGCTATGGTAAATGCGGAGAAGGAAG
GACAGATCGAATCCAAGATGATGAAGGCTCGCCAGTTGGAGGAGATCCGT
GAGGCTAAGAGAAAGGAGGCAGAGGCTAGACAGGCGCAGAAGAAGTCTAA
GCTGGTGCGTATATATGCTCATTATTTCCTATTTGTCCCGTTGAAGGACT
ATATTTTGAGGGTTGCTAACTGGTTTGGCCCGAACAGGAGGATGCAAAGC
AGTCCATCCGCCAAAAACGCAAGCACAAGGGAGGCTCCAGCGAAACAAAG
GCTGAGGCGCCAACCAAGGAGTCATCTTCGAAGTCAAAAGGAAAGAAGAA
GAGCGTTGCATTTGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000058:145815..146533+

>ATCC10864_003016-T1 ID=ATCC10864_003016-T1|Name=ATCC10864_003016-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1710bp|location=Sequence derived from alignment at MCQH01000058:145815..146533+ (Aspergillus niger ATCC 10864)
ATGGCGCCGACTAAGGGCTCCGGCAGTGGCAAGGCCTCGAACAAGGGCGA
CGCAAAGAAGAGCAAGCCTCTCTCGTCCGCATCGAAAGTGAACAAGAAAA
CCGCCAAGCGCCCGCCGCCCAAGGAAGTCAAGTCGAAGGCGCGCACAGAG
TCTAGCCTGCTGAAGAAGACGAAGAAGAGAGAATATACGGAGGAGGAGCT
GGGACTGCCCAAGCTGAATGCGATCACCCCCGTCGGTGTGGTAAAGCCCA
AGGGCAAGAAGAAGGGCAAGACTTTCGTTGACGATGCGGAGGGAATGATG
ACTATCCTCGCTATGGTAAATGCGGAGAAGGAAGGACAGATCGAATCCAA
GATGATGAAGGCTCGCCAGTTGGAGGAGATCCGTGAGGCTAAGAGAAAGG
AGGCAGAGGCTAGACAGGCGCAGAAGAAGTCTAAGCTGGAGGATGCAAAG
CAGTCCATCCGCCAAAAACGCAAGCACAAGGGAGGCTCCAGCGAAACAAA
GGCTGAGGCGCCAACCAAGGAGTCATCTTCGAAGTCAAAAGGAAAGAAGA
AGAGCGTTGCATTTGCTTGAATGGCGCCGACTAAGGGCTCCGGCAGTGGC
AAGGCCTCGAACAAGGGCGACGCAAAGAAGAGCAAGCCTCTCTCGTCCGC
ATCGAAAGTGAACAAGAAAACCGCCAAGCGCCCGCCGCCCAAGGAAGTCA
AGTCGAAGGCGCGCACAGAGTCTAGCCTGCTGAAGAAGACGAAGAAGAGA
GAATATACGGAGGAGGAGCTGGGACTGCCCAAGCTGAATGCGATCACCCC
CGTCGGTGTGGTAAAGCCCAAGGGCAAGAAGAAGGGCAAGACTTTCGTTG
ACGATGCGGAGGGAATGATGACTATCCTCGCTATGGTAAATGCGGAGAAG
GAAGGACAGATCGAATCCAAGATGATGAAGGCTCGCCAGTTGGAGGAGAT
CCGTGAGGCTAAGAGAAAGGAGGCAGAGGCTAGACAGGCGCAGAAGAAGT
CTAAGCTGGAGGATGCAAAGCAGTCCATCCGCCAAAAACGCAAGCACAAG
GGAGGCTCCAGCGAAACAAAGGCTGAGGCGCCAACCAAGGAGTCATCTTC
GAAGTCAAAAGGAAAGAAGAAGAGCGTTGCATTTGCTTGAATGGCGCCGA
CTAAGGGCTCCGGCAGTGGCAAGGCCTCGAACAAGGGCGACGCAAAGAAG
AGCAAGCCTCTCTCGTCCGCATCGAAAGTGAACAAGAAAACCGCCAAGCG
CCCGCCGCCCAAGGAAGTCAAGTCGAAGGCGCGCACAGAGTCTAGCCTGC
TGAAGAAGACGAAGAAGAGAGAATATACGGAGGAGGAGCTGGGACTGCCC
AAGCTGAATGCGATCACCCCCGTCGGTGTGGTAAAGCCCAAGGGCAAGAA
GAAGGGCAAGACTTTCGTTGACGATGCGGAGGGAATGATGACTATCCTCG
CTATGGTAAATGCGGAGAAGGAAGGACAGATCGAATCCAAGATGATGAAG
GCTCGCCAGTTGGAGGAGATCCGTGAGGCTAAGAGAAAGGAGGCAGAGGC
TAGACAGGCGCAGAAGAAGTCTAAGCTGGAGGATGCAAAGCAGTCCATCC
GCCAAAAACGCAAGCACAAGGGAGGCTCCAGCGAAACAAAGGCTGAGGCG
CCAACCAAGGAGTCATCTTCGAAGTCAAAAGGAAAGAAGAAGAGCGTTGC
ATTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042273ribosomal large subunit biogenesis
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC1ATCC10864_003016Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003016-T1.exon1ATCC10864_003016-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003016-T1.exon2ATCC10864_003016-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003016-T1.exon3ATCC10864_003016-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003016-T1.cdsATCC10864_003016-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003016-T1ATCC10864_003016-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR037650
Properties
Property NameValue
Product60S ribosomal subunit assembly/export protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:145815..146533 +
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