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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000058:195578..196525+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003034-T1 ID=ATCC10864_003034-T1|Name=ATCC10864_003034-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=948bp|location=Sequence derived from alignment at MCQH01000058:195578..196525+ (Aspergillus niger ATCC 10864)
ATGTTCAGAAACAACTACGACAACGATGCGGTCACCTTGTATGGACCTCC
CCCAAGCTCCCTCATCCACTAGAACAAAGTTTTGTTCTCCCGATACTATC
AGATTACTAACATAGCTCTCTACAGCTCCCCGCAAGGCCGGATCTTCCAA
GTCGAATATGCACAAGAAGCCGTCAAGCAAGGTTCCGTCGTAGTGGGACT
CGTCAACAAGACACATGCCGTGCTGGTCGGCCTCAAGGTTCGACATCTCA
CTTATATCCTGGCACTTCTCTCTCCCCGGGGCACATTCAGCTGACAGACA
AATCTCCAGCGTAATGCCGAAGAGCTGTCCTCGTACCAGAAGAAGATCAT
CGAAGTCGACTCCCACATGGGCATCGCCATCGCCGGTCTGGCATCGGACG
CTCGGGTGCTCTCCAACTTCATGAAGCAGCAGTCGCTCAGCTCCCGCATG
ACCTACGGCCGTCCGCTCCCTGTCGACCGCATTGTCAGTCAGATCGGCGA
CCGCGCCCAAACGAACACTCAACATTACGGCAAGCGCCCCTACGGTGTCG
GTCTGCTTGTCGCCGGTGTCGACGACTCCGGCCCGCACCTTTTCGAATTT
CAACCCTCCGGTATGACCCATGAGATGGTGGCATGCGCCATCGGAGCCCG
CTCCCAGATGGCTCGGACCTACCTGGAGCGGAATCTGGACAAGCTGGAGG
CCTCGTCGCGCGATGAGCTCATCACGCACGGCCTGCGGGCACTCAAGGAG
TCCCTGTCTCAGGACAAGGAGCTGACGGTGGACAACACATCCGTGGGTGT
GGTGGGGCTTGCGGGCGAAGGTGCCCCGGGGAAGATCGAAAGCTTCAAGC
TGTACGAGGGGCAGCAGCTGGTGCCGCTGCTGGAGGCACTGGAGCAGGCG
GATGCGGGCGAGACGAAAGATGAGGAGACGATGGAGGTTGATTCATAG back to topCoding sequence (CDS) from alignment at MCQH01000058:195578..196525+ >ATCC10864_003034-T1 ID=ATCC10864_003034-T1|Name=ATCC10864_003034-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2367bp|location=Sequence derived from alignment at MCQH01000058:195578..196525+ (Aspergillus niger ATCC 10864)
ATGTTCAGAAACAACTACGACAACGATGCGGTCACCTTCTCCCCGCAAGG
CCGGATCTTCCAAGTCGAATATGCACAAGAAGCCGTCAAGCAAGGTTCCG
TCGTAGTGGGACTCGTCAACAAGACACATGCCGTGCTGGTCGGCCTCAAG
CGTAATGCCGAAGAGCTGTCCTCGTACCAGAAGAAGATCATCGAAGTCGA
CTCCCACATGGGCATCGCCATCGCCGGTCTGGCATCGGACGCTCGGGTGC
TCTCCAACTTCATGAAGCAGCAGTCGCTCAGCTCCCGCATGACCTACGGC
CGTCCGCTCCCTGTCGACCGCATTGTCAGTCAGATCGGCGACCGCGCCCA
AACGAACACTCAACATTACGGCAAGCGCCCCTACGGTGTCGGTCTGCTTG
TCGCCGGTGTCGACGACTCCGGCCCGCACCTTTTCGAATTTCAACCCTCC
GGTATGACCCATGAGATGGTGGCATGCGCCATCGGAGCCCGCTCCCAGAT
GGCTCGGACCTACCTGGAGCGGAATCTGGACAAGCTGGAGGCCTCGTCGC
GCGATGAGCTCATCACGCACGGCCTGCGGGCACTCAAGGAGTCCCTGTCT
CAGGACAAGGAGCTGACGGTGGACAACACATCCGTGGGTGTGGTGGGGCT
TGCGGGCGAAGGTGCCCCGGGGAAGATCGAAAGCTTCAAGCTGTACGAGG
GGCAGCAGCTGGTGCCGCTGCTGGAGGCACTGGAGCAGGCGGATGCGGGC
GAGACGAAAGATGAGGAGACGATGGAGGTTGATTCATAGATGTTCAGAAA
CAACTACGACAACGATGCGGTCACCTTCTCCCCGCAAGGCCGGATCTTCC
AAGTCGAATATGCACAAGAAGCCGTCAAGCAAGGTTCCGTCGTAGTGGGA
CTCGTCAACAAGACACATGCCGTGCTGGTCGGCCTCAAGCGTAATGCCGA
AGAGCTGTCCTCGTACCAGAAGAAGATCATCGAAGTCGACTCCCACATGG
GCATCGCCATCGCCGGTCTGGCATCGGACGCTCGGGTGCTCTCCAACTTC
ATGAAGCAGCAGTCGCTCAGCTCCCGCATGACCTACGGCCGTCCGCTCCC
TGTCGACCGCATTGTCAGTCAGATCGGCGACCGCGCCCAAACGAACACTC
AACATTACGGCAAGCGCCCCTACGGTGTCGGTCTGCTTGTCGCCGGTGTC
GACGACTCCGGCCCGCACCTTTTCGAATTTCAACCCTCCGGTATGACCCA
TGAGATGGTGGCATGCGCCATCGGAGCCCGCTCCCAGATGGCTCGGACCT
ACCTGGAGCGGAATCTGGACAAGCTGGAGGCCTCGTCGCGCGATGAGCTC
ATCACGCACGGCCTGCGGGCACTCAAGGAGTCCCTGTCTCAGGACAAGGA
GCTGACGGTGGACAACACATCCGTGGGTGTGGTGGGGCTTGCGGGCGAAG
GTGCCCCGGGGAAGATCGAAAGCTTCAAGCTGTACGAGGGGCAGCAGCTG
GTGCCGCTGCTGGAGGCACTGGAGCAGGCGGATGCGGGCGAGACGAAAGA
TGAGGAGACGATGGAGGTTGATTCATAGATGTTCAGAAACAACTACGACA
ACGATGCGGTCACCTTCTCCCCGCAAGGCCGGATCTTCCAAGTCGAATAT
GCACAAGAAGCCGTCAAGCAAGGTTCCGTCGTAGTGGGACTCGTCAACAA
GACACATGCCGTGCTGGTCGGCCTCAAGCGTAATGCCGAAGAGCTGTCCT
CGTACCAGAAGAAGATCATCGAAGTCGACTCCCACATGGGCATCGCCATC
GCCGGTCTGGCATCGGACGCTCGGGTGCTCTCCAACTTCATGAAGCAGCA
GTCGCTCAGCTCCCGCATGACCTACGGCCGTCCGCTCCCTGTCGACCGCA
TTGTCAGTCAGATCGGCGACCGCGCCCAAACGAACACTCAACATTACGGC
AAGCGCCCCTACGGTGTCGGTCTGCTTGTCGCCGGTGTCGACGACTCCGG
CCCGCACCTTTTCGAATTTCAACCCTCCGGTATGACCCATGAGATGGTGG
CATGCGCCATCGGAGCCCGCTCCCAGATGGCTCGGACCTACCTGGAGCGG
AATCTGGACAAGCTGGAGGCCTCGTCGCGCGATGAGCTCATCACGCACGG
CCTGCGGGCACTCAAGGAGTCCCTGTCTCAGGACAAGGAGCTGACGGTGG
ACAACACATCCGTGGGTGTGGTGGGGCTTGCGGGCGAAGGTGCCCCGGGG
AAGATCGAAAGCTTCAAGCTGTACGAGGGGCAGCAGCTGGTGCCGCTGCT
GGAGGCACTGGAGCAGGCGGATGCGGGCGAGACGAAAGATGAGGAGACGA
TGGAGGTTGATTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
| GO:0019773 | proteasome core complex, alpha-subunit complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000426 |
| InterPro | IPR035144 |
| InterPro | IPR001353 |
| PFAM | PF10584 |
| InterPro | IPR023332 |
| PFAM | PF00227 |
| InterPro | IPR029055 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264441 |
| Note | MEROPS:MER0000549 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000058 | supercontig | MCQH01000058:195578..196525 + |
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