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ATCC10864_003046-T1, ATCC10864_003046-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003046-T1
Unique NameATCC10864_003046-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:238525..240548+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003046-T1 ID=ATCC10864_003046-T1|Name=ATCC10864_003046-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2024bp|location=Sequence derived from alignment at MCQH01000058:238525..240548+ (Aspergillus niger ATCC 10864)
ATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCC
ATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTC
TCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCA
GTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGC
GCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGG
GACCTGCATGTGTGCAAGTATGAGAGCTCACTTCTGCCATTGAATTTCCT
CCCGACTCAGCTCAGCAGCGCCGGCAGCTAATAACGTCACTCACTCACGC
AGATCTACAAATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTC
GCAGTCGTCCGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACAC
CGTCCTCGACGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCG
TGACTGGCGAAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATC
GTCAAATCCGTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACAC
AGTCCGCTACGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACA
ACCGCCTAGACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCT
GACACGGAGCAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCT
ATCGAAGCGGTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCG
AACTAGAGGCGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCC
ACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGC
TCAAATCGCCCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTA
ACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCG
CTTTTGAATCGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGA
AGGCACCACGCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGT
ACTGCAAGCTCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCT
ACCGGACAGAAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCAT
CAGACGGGCAAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCG
TCTCAGTAGAAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTC
GAGCAGGAGGTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTG
CGTCGTCGTAACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGC
CCGCGCAGCTCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGAC
CAGCGCCAGCGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCT
GAACCTCACCAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTC
AGCAATTTCTACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCA
ACAGGCATCGATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGA
AGATTCACTCGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTC
TCGAACACCTAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACG
CCTATGCCTTCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGA
CATGGACATGGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTG
CCGCTGATACCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTG
GAAGATGTTCTGGGCGTTGTGTTTGAAAAGTAAGTTGCTATGTATTATAG
TGTGGTAGAGTGCTGTTTTTCTTTTGTTGTTCTTGTTGCTGACTGAGTCG
AATAGGTTCTGTGTGGGCAAGTGA
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Coding sequence (CDS) from alignment at MCQH01000058:238525..240548+

>ATCC10864_003046-T1 ID=ATCC10864_003046-T1|Name=ATCC10864_003046-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5589bp|location=Sequence derived from alignment at MCQH01000058:238525..240548+ (Aspergillus niger ATCC 10864)
ATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCC
ATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTC
TCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCA
GTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGC
GCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGG
GACCTGCATGTGTGCAAATCTACAAATCTCTCTGTCCAGAAGCACCTCTT
CCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTACGATCCCTCCCAGAA
ACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCTTAGTCCTATACTTCC
CCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTCGAGCTGCACCTCCAC
GGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTCCATCTCGCGTACAAA
CAACCCTGACTACACAGTCCGCTACGCCGAACCCGGCGAGTTCACCCGTC
GAGCCTTCATGAACAACCGCCTAGACCTCCCGCAGATCGAAGCCCTGGGC
GATACCTTGTCCGCTGACACGGAGCAACAGCGCCGGCTTGCTGTCCGGGG
TGCCAGCGATGCGCTATCGAAGCGGTACGAACAATGGCGACATCAATTGC
TCTATGCGCGCGGCGAACTAGAGGCGTTGATTGACTTCTCAGAGGATCAG
CATTTCGACGAGTCCACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAGGT
GCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCCAGAATGCGTCCAAGG
GCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGAAT
GCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGGCAGAGAGGCCGCCAT
CGTTAGCACTGAGGAAGGCACCACGCGGGACATCGTGGATGTCGGTGTCG
ACATCGGCGGCTGGTACTGCAAGCTCGGCGACATGGCAGGGATACGCTCC
GAGCCAAATGATCCTACCGGACAGAAGAAGACGGTTGTGATTGGCGCCGT
GGAACAAGAGGGCATCAGACGGGCAAAGGCACGTGCCTTGGAATCGGACG
TGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACCGATGGTACAGCGACG
TACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGCAGCCAACGACTGCGC
TCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACAAATGTGACCGATTAC
CGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACAGTCAGCCAACTCTTC
AAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGGCATCTCCTGTCTAGA
TGCCACCAACGGCCTGAACCTCACCAGCCCCGGTTCCAGCCAGCTCTCCG
ATCCCGGCTACATTCAGCAATTTCTACAAGGTCTGATGACTACATTCGAG
GATATCGCCTCTCCAACAGGCATCGATGGGGACGAGAACGGAAAATACGA
TCATGCATATTGGGAAGATTCACTCGGCGTGACGCATCGCCAAAGCTCTA
ATTTACAACGCTGTCTCGAACACCTAGATGATTTCCTGACGCAAACTCAA
CCGCAATCCCAGACGCCTATGCCTTCCTCATCTCGCCAATTCGCTCATGA
ATTCCCAGAAACGGACATGGACATGGACATTGACATCGTCACCGCCGCTG
AACACCTGCGCTCTGCCGCTGATACCATGGCGAAGATTACGGGCCGTGGG
GAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGTGTTTGAAAAGTTCTG
TGTGGGCAAGTGAATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGA
CACCCTTTCGCCCATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGC
GCTGGTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCG
TCGATACTTCTCAGTATCCTCACCAGCTCAATCCATATTCGATGCCGATT
CCACCATATATGCGCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTT
GTGCGGGCATCGGGACCTGCATGTGTGCAAATCTACAAATCTCTCTGTCC
AGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTACG
ATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCTTA
GTCCTATACTTCCCCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTCGA
GCTGCACCTCCACGGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTCCA
TCTCGCGTACAAACAACCCTGACTACACAGTCCGCTACGCCGAACCCGGC
GAGTTCACCCGTCGAGCCTTCATGAACAACCGCCTAGACCTCCCGCAGAT
CGAAGCCCTGGGCGATACCTTGTCCGCTGACACGGAGCAACAGCGCCGGC
TTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAGCGGTACGAACAATGG
CGACATCAATTGCTCTATGCGCGCGGCGAACTAGAGGCGTTGATTGACTT
CTCAGAGGATCAGCATTTCGACGAGTCCACCGAGGACCTGGTGTCCTCGG
TTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCCAG
AATGCGTCCAAGGGCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTCCT
GGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGGCA
GAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACCACGCGGGACATCGTG
GATGTCGGTGTCGACATCGGCGGCTGGTACTGCAAGCTCGGCGACATGGC
AGGGATACGCTCCGAGCCAAATGATCCTACCGGACAGAAGAAGACGGTTG
TGATTGGCGCCGTGGAACAAGAGGGCATCAGACGGGCAAAGGCACGTGCC
TTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACCGA
TGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGCAG
CCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACAAA
TGTGACCGATTACCGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACAGT
CAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGGCA
TCTCCTGTCTAGATGCCACCAACGGCCTGAACCTCACCAGCCCCGGTTCC
AGCCAGCTCTCCGATCCCGGCTACATTCAGCAATTTCTACAAGGTCTGAT
GACTACATTCGAGGATATCGCCTCTCCAACAGGCATCGATGGGGACGAGA
ACGGAAAATACGATCATGCATATTGGGAAGATTCACTCGGCGTGACGCAT
CGCCAAAGCTCTAATTTACAACGCTGTCTCGAACACCTAGATGATTTCCT
GACGCAAACTCAACCGCAATCCCAGACGCCTATGCCTTCCTCATCTCGCC
AATTCGCTCATGAATTCCCAGAAACGGACATGGACATGGACATTGACATC
GTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGATACCATGGCGAAGAT
TACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGTGT
TTGAAAAGTTCTGTGTGGGCAAGTGAATGCGATCATCGGCCGTCCGGACC
CTGCGGTGGGCGACACCCTTTCGCCCATCATGGAGTAGGTGCTTCACCGT
GGCCCGGCAGGGCGCTGGTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGC
GTGTGCCTCCGCGTCGATACTTCTCAGTATCCTCACCAGCTCAATCCATA
TTCGATGCCGATTCCACCATATATGCGCTTTCGACAGCATCTGGACGGGC
TGCCATTGCCGTTGTGCGGGCATCGGGACCTGCATGTGTGCAAATCTACA
AATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCGTC
CGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTCGA
CGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCGTGACTGGCG
AAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATCGTCAAATCC
GTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACACAGTCCGCTA
CGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACAACCGCCTAG
ACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCTGACACGGAG
CAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAGCG
GTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCGAACTAGAGG
CGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCCACCGAGGAC
CTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATCGC
CCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTAACGGAATCA
AGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGAAT
CGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACCAC
GCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGTACTGCAAGC
TCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCTACCGGACAG
AAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCATCAGACGGGC
AAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGTAG
AAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGGAG
GTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTCGT
AACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGCCCGCGCAGC
TCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCCAG
CGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCTGAACCTCAC
CAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTCAGCAATTTC
TACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCAACAGGCATC
GATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGAAGATTCACT
CGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTCTCGAACACC
TAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACGCCTATGCCT
TCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGACATGGACAT
GGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGATA
CCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATGTT
CTGGGCGTTGTGTTTGAAAAGTTCTGTGTGGGCAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005515protein binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003046ATCC10864_003046Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003046-T1.exon1ATCC10864_003046-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003046-T1.exon2ATCC10864_003046-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003046-T1.exon3ATCC10864_003046-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003046-T1.cdsATCC10864_003046-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003046-T1ATCC10864_003046-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10396
InterProIPR027417
InterProIPR018948
InterProIPR031168
InterProIPR004520
InterProIPR027266
PFAMPF12631
PFAMPF01926
InterProIPR027368
InterProIPR005225
InterProIPR006073
InterProIPR025867
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:238525..240548 +
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