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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000058:252837..254756- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003051-T1 ID=ATCC10864_003051-T1|Name=ATCC10864_003051-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1920bp|location=Sequence derived from alignment at MCQH01000058:252837..254756- (Aspergillus niger ATCC 10864)
ATGGAGCGGCAAACTAGCCCCTCAGATGACGCCCAGCGATGGCAGCCATC
CTACCATTTCACTGCCCCCCACGGGTGGATGAATGACCCGTGCGGTCTAG
GTTATGATCCTGCAACCGGTGTCTATCACCTGTCATTCCAGTGGAACCCG
AAAGGCAATGACTGGGGAAATATATCCTGGGGGCACGCTGTGTCTAATGA
TCTGCTCCATTGGGAGGTTTATCCGGAGCCATGTCTGCAGCCCACCACCG
AATATGACCGATGTGGCGTCTTTACGGGCTGCTTTCGACCCAATGCTGTA
GATGGGGCTCCGAATGCCCTGACTGCTATATACACATCAGTGAAGCGCCT
TCCCATTCATTACACGCTGCCGTATGTGCCTGGCTCCGAATCGGTCAGTT
TAGCCACTTCGCATGACCAGGGTTTGACATGGCAGCGTCTCGACTGCAAC
CCAATTATAGCACGCTCACCCCCAAATGTCAAAGTAGCAGGCTGGCGGGA
TCCTTTTGTGGGTGCCTGGCAGTTCATGCGGGAACAGCCGGAAGCTTTTC
CATCCTCCGACCTCTGCGGTCTGATCTCCGGAGGTATCGCCGGACAGACC
CCAACAGCTTTTGTATATTCCATCAATCCTCACGACTTACGACAGTGGAA
GTACCTGGGGCCGCTGGTTGATGTTGGACTCAATTTCAACCCCTCCCGTT
GGTCCAGCGACTTGGGGGTCAACTGGGAAGTCGTCAACTGGATTCCCATG
ACAGACGACGAGGATGTTACTCGGTTGTTCATCCTCATGGGGGCTGAGGG
AGGTCTTGCATCTGACAAAAGCCAGAAAAAGTCACCTCGAGCACAGCTTT
GGATGTCAATCAAGCCGTGCTTTAGCACCCAACCGCATAGCAATACCGAC
CCTCTCGCATCCTATGCATTTTCCGGGGTCTTTGATCACGGTTGCGGCTA
TGCGGCAAATAGCTTTTGGGACCCGGTCACAGGCCAGCAGATAGTCTATT
GCTGGATTACAGAAGATAACCTGCCAGATGACCTTAGGCACCAACAAGGA
TGGAGCGGCATGTTGTCTATCCCACGAGTAGTGAAACTAATCACTCTGCG
CCATGTTAAGCGAGCCCGGCGTTCAGAGCTGAATGCTATCACCTCGATCG
AAACAGAAGAAGAGAGACAACAAACCTTCACCATCCGAACGCTGGGTGTT
CTCCCAGATCCACGACTTAAAGCTCTTCGCAGTAAGACGAACAGCATGCA
TATCGATCACCTGCCCCTAAGCAAATCCGACAATCGTATCTCTCCACCCA
AAGCCCACTTTCCTATAACGACATCCAGATGGGAAGTCCATGCCAAATTC
TCCGTCAGTAACCAATGCGGGAGAGTAGGCATAGAAGTCCTCCATGGCAC
CAGTATGTTGTATTCATCTCCCCCACACTGGCACACATCGTAGACTTTCA
GCTCTTCCCCACTAACAGTCCACCAACACAAACCAGCCCTTTCAGACCCG
CCGCGCCGTACTCTTCTATACTGGGACCCAGCCAGCGAAACCTTCTGTAT
CCAACGACCAAGTCCGCATGACCCCCGCATCAATCATGAACTAGTGACCG
CTGCCCATACGCTATTTACGTTTGAAACCCCATCCGGCGAACAAAAGGAA
GAGGCGCTACAGATCCACGCATTCTGGGATACGAGCGTGCTCGAAGTGTT
TGTGAACGAGCGCACCGTCATCTCCACCCGCATCTATCTGCCACCTGACC
AAGCGTCCCAGTGTGCACTGCGTTTCTTCGCCGAGGGAGAGACCGACCAT
GATGATCCTCCGGCTGTGGTTCTACAGGCAGATAGTTGGGATGGATTGGG
CCTCGACAAGCATGATTGTGTCTCGTTGATCGAGCAATTGAGAACGAGGA
AGAAGTCGATGCGCGAGTGA back to topCoding sequence (CDS) from alignment at MCQH01000058:252837..254756- >ATCC10864_003051-T1 ID=ATCC10864_003051-T1|Name=ATCC10864_003051-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3708bp|location=Sequence derived from alignment at MCQH01000058:252837..254756- (Aspergillus niger ATCC 10864)
TCCACCAACACAAACCAGCCCTTTCAGACCCGCCGCGCCGTACTCTTCTA
TACTGGGACCCAGCCAGCGAAACCTTCTGTATCCAACGACCAAGTCCGCA
TGACCCCCGCATCAATCATGAACTAGTGACCGCTGCCCATACGCTATTTA
CGTTTGAAACCCCATCCGGCGAACAAAAGGAAGAGGCGCTACAGATCCAC
GCATTCTGGGATACGAGCGTGCTCGAAGTGTTTGTGAACGAGCGCACCGT
CATCTCCACCCGCATCTATCTGCCACCTGACCAAGCGTCCCAGTGTGCAC
TGCGTTTCTTCGCCGAGGGAGAGACCGACCATGATGATCCTCCGGCTGTG
GTTCTACAGGCAGATAGTTGGGATGGATTGGGCCTCGACAAGCATGATTG
TGTCTCGTTGATCGAGCAATTGAGAACGAGGAAGAAGTCGATGCGCGAGT
GAATGGAGCGGCAAACTAGCCCCTCAGATGACGCCCAGCGATGGCAGCCA
TCCTACCATTTCACTGCCCCCCACGGGTGGATGAATGACCCGTGCGGTCT
AGGTTATGATCCTGCAACCGGTGTCTATCACCTGTCATTCCAGTGGAACC
CGAAAGGCAATGACTGGGGAAATATATCCTGGGGGCACGCTGTGTCTAAT
GATCTGCTCCATTGGGAGGTTTATCCGGAGCCATGTCTGCAGCCCACCAC
CGAATATGACCGATGTGGCGTCTTTACGGGCTGCTTTCGACCCAATGCTG
TAGATGGGGCTCCGAATGCCCTGACTGCTATATACACATCAGTGAAGCGC
CTTCCCATTCATTACACGCTGCCGTATGTGCCTGGCTCCGAATCGGTCAG
TTTAGCCACTTCGCATGACCAGGGTTTGACATGGCAGCGTCTCGACTGCA
ACCCAATTATAGCACGCTCACCCCCAAATGTCAAAGTAGCAGGCTGGCGG
GATCCTTTTGTGGGTGCCTGGCAGTTCATGCGGGAACAGCCGGAAGCTTT
TCCATCCTCCGACCTCTGCGGTCTGATCTCCGGAGGTATCGCCGGACAGA
CCCCAACAGCTTTTGTATATTCCATCAATCCTCACGACTTACGACAGTGG
AAGTACCTGGGGCCGCTGGTTGATGTTGGACTCAATTTCAACCCCTCCCG
TTGGTCCAGCGACTTGGGGGTCAACTGGGAAGTCGTCAACTGGATTCCCA
TGACAGACGACGAGGATGTTACTCGGTTGTTCATCCTCATGGGGGCTGAG
GGAGGTCTTGCATCTGACAAAAGCCAGAAAAAGTCACCTCGAGCACAGCT
TTGGATGTCAATCAAGCCGTGCTTTAGCACCCAACCGCATAGCAATACCG
ACCCTCTCGCATCCTATGCATTTTCCGGGGTCTTTGATCACGGTTGCGGC
TATGCGGCAAATAGCTTTTGGGACCCGGTCACAGGCCAGCAGATAGTCTA
TTGCTGGATTACAGAAGATAACCTGCCAGATGACCTTAGGCACCAACAAG
GATGGAGCGGCATGTTGTCTATCCCACGAGTAGTGAAACTAATCACTCTG
CGCCATGTTAAGCGAGCCCGGCGTTCAGAGCTGAATGCTATCACCTCGAT
CGAAACAGAAGAAGAGAGACAACAAACCTTCACCATCCGAACGCTGGGTG
TTCTCCCAGATCCACGACTTAAAGCTCTTCGCAGTAAGACGAACAGCATG
CATATCGATCACCTGCCCCTAAGCAAATCCGACAATCGTATCTCTCCACC
CAAAGCCCACTTTCCTATAACGACATCCAGATGGGAAGTCCATGCCAAAT
TCTCCGTCAGTAACCAATGCGGGAGAGTAGGCATAGAAGTCCTCCATGGC
ACCATCCACCAACACAAACCAGCCCTTTCAGACCCGCCGCGCCGTACTCT
TCTATACTGGGACCCAGCCAGCGAAACCTTCTGTATCCAACGACCAAGTC
CGCATGACCCCCGCATCAATCATGAACTAGTGACCGCTGCCCATACGCTA
TTTACGTTTGAAACCCCATCCGGCGAACAAAAGGAAGAGGCGCTACAGAT
CCACGCATTCTGGGATACGAGCGTGCTCGAAGTGTTTGTGAACGAGCGCA
CCGTCATCTCCACCCGCATCTATCTGCCACCTGACCAAGCGTCCCAGTGT
GCACTGCGTTTCTTCGCCGAGGGAGAGACCGACCATGATGATCCTCCGGC
TGTGGTTCTACAGGCAGATAGTTGGGATGGATTGGGCCTCGACAAGCATG
ATTGTGTCTCGTTGATCGAGCAATTGAGAACGAGGAAGAAGTCGATGCGC
GAGTGAATGGAGCGGCAAACTAGCCCCTCAGATGACGCCCAGCGATGGCA
GCCATCCTACCATTTCACTGCCCCCCACGGGTGGATGAATGACCCGTGCG
GTCTAGGTTATGATCCTGCAACCGGTGTCTATCACCTGTCATTCCAGTGG
AACCCGAAAGGCAATGACTGGGGAAATATATCCTGGGGGCACGCTGTGTC
TAATGATCTGCTCCATTGGGAGGTTTATCCGGAGCCATGTCTGCAGCCCA
CCACCGAATATGACCGATGTGGCGTCTTTACGGGCTGCTTTCGACCCAAT
GCTGTAGATGGGGCTCCGAATGCCCTGACTGCTATATACACATCAGTGAA
GCGCCTTCCCATTCATTACACGCTGCCGTATGTGCCTGGCTCCGAATCGG
TCAGTTTAGCCACTTCGCATGACCAGGGTTTGACATGGCAGCGTCTCGAC
TGCAACCCAATTATAGCACGCTCACCCCCAAATGTCAAAGTAGCAGGCTG
GCGGGATCCTTTTGTGGGTGCCTGGCAGTTCATGCGGGAACAGCCGGAAG
CTTTTCCATCCTCCGACCTCTGCGGTCTGATCTCCGGAGGTATCGCCGGA
CAGACCCCAACAGCTTTTGTATATTCCATCAATCCTCACGACTTACGACA
GTGGAAGTACCTGGGGCCGCTGGTTGATGTTGGACTCAATTTCAACCCCT
CCCGTTGGTCCAGCGACTTGGGGGTCAACTGGGAAGTCGTCAACTGGATT
CCCATGACAGACGACGAGGATGTTACTCGGTTGTTCATCCTCATGGGGGC
TGAGGGAGGTCTTGCATCTGACAAAAGCCAGAAAAAGTCACCTCGAGCAC
AGCTTTGGATGTCAATCAAGCCGTGCTTTAGCACCCAACCGCATAGCAAT
ACCGACCCTCTCGCATCCTATGCATTTTCCGGGGTCTTTGATCACGGTTG
CGGCTATGCGGCAAATAGCTTTTGGGACCCGGTCACAGGCCAGCAGATAG
TCTATTGCTGGATTACAGAAGATAACCTGCCAGATGACCTTAGGCACCAA
CAAGGATGGAGCGGCATGTTGTCTATCCCACGAGTAGTGAAACTAATCAC
TCTGCGCCATGTTAAGCGAGCCCGGCGTTCAGAGCTGAATGCTATCACCT
CGATCGAAACAGAAGAAGAGAGACAACAAACCTTCACCATCCGAACGCTG
GGTGTTCTCCCAGATCCACGACTTAAAGCTCTTCGCAGTAAGACGAACAG
CATGCATATCGATCACCTGCCCCTAAGCAAATCCGACAATCGTATCTCTC
CACCCAAAGCCCACTTTCCTATAACGACATCCAGATGGGAAGTCCATGCC
AAATTCTCCGTCAGTAACCAATGCGGGAGAGTAGGCATAGAAGTCCTCCA
TGGCACCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00251 |
| InterPro | IPR013189 |
| InterPro | IPR023296 |
| InterPro | IPR013320 |
| PFAM | PF08244 |
| InterPro | IPR001362 |
| InterPro | IPR013148 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH32 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000058 | supercontig | MCQH01000058:252837..254756 - |
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