You are here

Home

ATCC10864_003055-T1, ATCC10864_003055-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003055-T1
Unique NameATCC10864_003055-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:263667..264850+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003055-T1 ID=ATCC10864_003055-T1|Name=ATCC10864_003055-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1184bp|location=Sequence derived from alignment at MCQH01000058:263667..264850+ (Aspergillus niger ATCC 10864)
ATGGGCAAGAAGCGCGTTCTCGTCAGTTACGGCGTCGACATTGACGCTGT
CGCCGGCTGGCTAGGATCCTACGGCGGCGAGGACAGTTCCAACGATATTA
GTCGAGGTAAGTACTAAAAGTCCAAACACCGAACAGAACAAACACACTTT
CTTTCTATATACTTCGCCCTGTCCATACCAACGGGTAGCAGCAGTAGTAT
TACTTATTAGTAGTAGTACACTCACTCACATCCTCCAGGACTCTGGGCCG
GCCACATCGGCACCACACGCCTTCTCAAACTCTTCTCCAAATACAACATC
AAAGCCACCTTCTTCATCCCAGGCCACTCACTCGAGACCTTTCCCGAAGA
ATGCGCCATGGTACGAGACGCCGGCCACGAAATCGGCCTGCATGGCTACA
CGCACGAAAACCCCTCCGACATGACCCTTGAGCAGCAACGGGACATTCTC
GATAAGACCTATCACATGCTGTACGATTTCACGGGCAAGCCGCCGCGGGG
TATCGTTGCGCCATGGTGGGAAACCAGTAAGGAGATGGCCGATTTGTTGC
TCTCCTATGGAATTGAATATGATCATTCCATGTCTCATCATGATTGTCAG
ATGTATTGGTTGAGGACGGGCGATACATGGACTAAAATTGATTATTCCCA
GAAGGCGGAGACTTGGATGAAGCCGCTGGTTAGGGGCCAGGATACGGGGC
TCGTGGAGATCCCCGGCAACTGGTATATTGATGATTTGCCGCCTATGATG
TTTATCAAGTCCGCGCCGAATAGTCATGGCTGGGTGAATCCTAAGGATGT
TGAGGATCTTTGGAAGGTGAGTTCGTCTTGGAGGTTGACGCGTTGGTTCT
TGGGGCCTTTGATGTAACTGATGATCTGACAGGATCATTTCGACTACTTC
TATCGCGAGTACGATGAGTTTGTCTTCCCTATGACTATTCATCCTGATGT
GTCGGGCCGTCCGCATGTCCTTCTTATGCATGAGAGGTAAGTTGGGTGCT
TGTCTGGTTAGAACTGTTTTGTGTGGAGGGCTTGCTGATAGGCTCTAGAA
TCATTGAATACATAAACAAGCACGAGGGCGTGGAATGGGTCACTTTTGAG
CAGATGTGCGATGACTTCAAGAGCAAGAACAAGCCGCCGGAGGGCGCTAG
AATGCCTTCTGCTCCCATGCCAGCAAGGAAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000058:263667..264850+

>ATCC10864_003055-T1 ID=ATCC10864_003055-T1|Name=ATCC10864_003055-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3696bp|location=Sequence derived from alignment at MCQH01000058:263667..264850+ (Aspergillus niger ATCC 10864)
ATGGGCAAGAAGCGCGTTCTCGTCAGTTACGGCGTCGACATTGACGCTGT
CGCCGGCTGGCTAGGATCCTACGGCGGCGAGGACAGTTCCAACGATATTA
GTCGAGGACTCTGGGCCGGCCACATCGGCACCACACGCCTTCTCAAACTC
TTCTCCAAATACAACATCAAAGCCACCTTCTTCATCCCAGGCCACTCACT
CGAGACCTTTCCCGAAGAATGCGCCATGGTACGAGACGCCGGCCACGAAA
TCGGCCTGCATGGCTACACGCACGAAAACCCCTCCGACATGACCCTTGAG
CAGCAACGGGACATTCTCGATAAGACCTATCACATGCTGTACGATTTCAC
GGGCAAGCCGCCGCGGGGTATCGTTGCGCCATGGTGGGAAACCAGTAAGG
AGATGGCCGATTTGTTGCTCTCCTATGGAATTGAATATGATCATTCCATG
TCTCATCATGATTGTCAGATGTATTGGTTGAGGACGGGCGATACATGGAC
TAAAATTGATTATTCCCAGAAGGCGGAGACTTGGATGAAGCCGCTGGTTA
GGGGCCAGGATACGGGGCTCGTGGAGATCCCCGGCAACTGGTATATTGAT
GATTTGCCGCCTATGATGTTTATCAAGTCCGCGCCGAATAGTCATGGCTG
GGTGAATCCTAAGGATGTTGAGGATCTTTGGAAGGATCATTTCGACTACT
TCTATCGCGAGTACGATGAGTTTGTCTTCCCTATGACTATTCATCCTGAT
GTGTCGGGCCGTCCGCATGTCCTTCTTATGCATGAGAGAATCATTGAATA
CATAAACAAGCACGAGGGCGTGGAATGGGTCACTTTTGAGCAGATGTGCG
ATGACTTCAAGAGCAAGAACAAGCCGCCGGAGGGCGCTAGAATGCCTTCT
GCTCCCATGCCAGCAAGGAAGTGAATGGGCAAGAAGCGCGTTCTCGTCAG
TTACGGCGTCGACATTGACGCTGTCGCCGGCTGGCTAGGATCCTACGGCG
GCGAGGACAGTTCCAACGATATTAGTCGAGGACTCTGGGCCGGCCACATC
GGCACCACACGCCTTCTCAAACTCTTCTCCAAATACAACATCAAAGCCAC
CTTCTTCATCCCAGGCCACTCACTCGAGACCTTTCCCGAAGAATGCGCCA
TGGTACGAGACGCCGGCCACGAAATCGGCCTGCATGGCTACACGCACGAA
AACCCCTCCGACATGACCCTTGAGCAGCAACGGGACATTCTCGATAAGAC
CTATCACATGCTGTACGATTTCACGGGCAAGCCGCCGCGGGGTATCGTTG
CGCCATGGTGGGAAACCAGTAAGGAGATGGCCGATTTGTTGCTCTCCTAT
GGAATTGAATATGATCATTCCATGTCTCATCATGATTGTCAGATGTATTG
GTTGAGGACGGGCGATACATGGACTAAAATTGATTATTCCCAGAAGGCGG
AGACTTGGATGAAGCCGCTGGTTAGGGGCCAGGATACGGGGCTCGTGGAG
ATCCCCGGCAACTGGTATATTGATGATTTGCCGCCTATGATGTTTATCAA
GTCCGCGCCGAATAGTCATGGCTGGGTGAATCCTAAGGATGTTGAGGATC
TTTGGAAGGATCATTTCGACTACTTCTATCGCGAGTACGATGAGTTTGTC
TTCCCTATGACTATTCATCCTGATGTGTCGGGCCGTCCGCATGTCCTTCT
TATGCATGAGAGAATCATTGAATACATAAACAAGCACGAGGGCGTGGAAT
GGGTCACTTTTGAGCAGATGTGCGATGACTTCAAGAGCAAGAACAAGCCG
CCGGAGGGCGCTAGAATGCCTTCTGCTCCCATGCCAGCAAGGAAGTGAAT
GGGCAAGAAGCGCGTTCTCGTCAGTTACGGCGTCGACATTGACGCTGTCG
CCGGCTGGCTAGGATCCTACGGCGGCGAGGACAGTTCCAACGATATTAGT
CGAGGACTCTGGGCCGGCCACATCGGCACCACACGCCTTCTCAAACTCTT
CTCCAAATACAACATCAAAGCCACCTTCTTCATCCCAGGCCACTCACTCG
AGACCTTTCCCGAAGAATGCGCCATGGTACGAGACGCCGGCCACGAAATC
GGCCTGCATGGCTACACGCACGAAAACCCCTCCGACATGACCCTTGAGCA
GCAACGGGACATTCTCGATAAGACCTATCACATGCTGTACGATTTCACGG
GCAAGCCGCCGCGGGGTATCGTTGCGCCATGGTGGGAAACCAGTAAGGAG
ATGGCCGATTTGTTGCTCTCCTATGGAATTGAATATGATCATTCCATGTC
TCATCATGATTGTCAGATGTATTGGTTGAGGACGGGCGATACATGGACTA
AAATTGATTATTCCCAGAAGGCGGAGACTTGGATGAAGCCGCTGGTTAGG
GGCCAGGATACGGGGCTCGTGGAGATCCCCGGCAACTGGTATATTGATGA
TTTGCCGCCTATGATGTTTATCAAGTCCGCGCCGAATAGTCATGGCTGGG
TGAATCCTAAGGATGTTGAGGATCTTTGGAAGGATCATTTCGACTACTTC
TATCGCGAGTACGATGAGTTTGTCTTCCCTATGACTATTCATCCTGATGT
GTCGGGCCGTCCGCATGTCCTTCTTATGCATGAGAGAATCATTGAATACA
TAAACAAGCACGAGGGCGTGGAATGGGTCACTTTTGAGCAGATGTGCGAT
GACTTCAAGAGCAAGAACAAGCCGCCGGAGGGCGCTAGAATGCCTTCTGC
TCCCATGCCAGCAAGGAAGTGAATGGGCAAGAAGCGCGTTCTCGTCAGTT
ACGGCGTCGACATTGACGCTGTCGCCGGCTGGCTAGGATCCTACGGCGGC
GAGGACAGTTCCAACGATATTAGTCGAGGACTCTGGGCCGGCCACATCGG
CACCACACGCCTTCTCAAACTCTTCTCCAAATACAACATCAAAGCCACCT
TCTTCATCCCAGGCCACTCACTCGAGACCTTTCCCGAAGAATGCGCCATG
GTACGAGACGCCGGCCACGAAATCGGCCTGCATGGCTACACGCACGAAAA
CCCCTCCGACATGACCCTTGAGCAGCAACGGGACATTCTCGATAAGACCT
ATCACATGCTGTACGATTTCACGGGCAAGCCGCCGCGGGGTATCGTTGCG
CCATGGTGGGAAACCAGTAAGGAGATGGCCGATTTGTTGCTCTCCTATGG
AATTGAATATGATCATTCCATGTCTCATCATGATTGTCAGATGTATTGGT
TGAGGACGGGCGATACATGGACTAAAATTGATTATTCCCAGAAGGCGGAG
ACTTGGATGAAGCCGCTGGTTAGGGGCCAGGATACGGGGCTCGTGGAGAT
CCCCGGCAACTGGTATATTGATGATTTGCCGCCTATGATGTTTATCAAGT
CCGCGCCGAATAGTCATGGCTGGGTGAATCCTAAGGATGTTGAGGATCTT
TGGAAGGATCATTTCGACTACTTCTATCGCGAGTACGATGAGTTTGTCTT
CCCTATGACTATTCATCCTGATGTGTCGGGCCGTCCGCATGTCCTTCTTA
TGCATGAGAGAATCATTGAATACATAAACAAGCACGAGGGCGTGGAATGG
GTCACTTTTGAGCAGATGTGCGATGACTTCAAGAGCAAGAACAAGCCGCC
GGAGGGCGCTAGAATGCCTTCTGCTCCCATGCCAGCAAGGAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003055ATCC10864_003055Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003055-T1.exon1ATCC10864_003055-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003055-T1.exon2ATCC10864_003055-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003055-T1.exon3ATCC10864_003055-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003055-T1.exon4ATCC10864_003055-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003055-T1.cdsATCC10864_003055-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003055-T1ATCC10864_003055-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002509
InterProIPR011330
PFAMPF01522
InterProIPR037950
Properties
Property NameValue
NoteCAZy:CE4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:263667..264850 +
Powered by Drupal