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ATCC10864_003056-T1, ATCC10864_003056-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003056-T1
Unique NameATCC10864_003056-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:265084..266389-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003056-T1 ID=ATCC10864_003056-T1|Name=ATCC10864_003056-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1306bp|location=Sequence derived from alignment at MCQH01000058:265084..266389- (Aspergillus niger ATCC 10864)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGTACGTACAGC
AGGTCCCAGCACTAAAGCCAGCTTAGGATGTCGAGTCTGATTGCCAAATT
TAAACAATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTT
GGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAA
CATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTT
CGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCG
GTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTACATCTACCCCACTTGG
AGAGGGAGACGAGAGACGGCTTTAATCTAATATGCTCCAGGTATCGACGT
GGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGC
CTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGTACGTACTA
GACAGTGAGCTACATTACCTTTCCTGGATGCTCACGGTGGTATAGTATGA
CATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCG
ACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCC
GATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGC
AAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACAT
AACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCG
TCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCA
GTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTC
CAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGA
GACACTGAATGAATTGTGGTATGTACACAGTGCAGTCTGCCAATTTTATG
TTTGTGGACTCGTCCTGACCGTATTTCTAGGGAATTGGGGTATTCCTCCC
ATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTG
TCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACAT
GCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTG
CGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAG
AATTGA
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Coding sequence (CDS) from alignment at MCQH01000058:265084..266389-

>ATCC10864_003056-T1 ID=ATCC10864_003056-T1|Name=ATCC10864_003056-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5295bp|location=Sequence derived from alignment at MCQH01000058:265084..266389- (Aspergillus niger ATCC 10864)
GGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTCA
CCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGG
GAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGCT
GCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGC
AGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGCCCAGCAAGC
TTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTTCG
CCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCGCT
ATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAA
ACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCG
CCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACTTG
CAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAG
GGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCT
GCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGTGG
TATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCA
CTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGG
GTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGA
AACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACG
TTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGC
TTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCT
CAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCC
TCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGA
ACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGT
TCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAA
TTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCA
GTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACA
TGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGC
CCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGT
TCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCG
CGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAA
GCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGG
GCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATC
AACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAA
CGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGA
TCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAAT
GAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGA
AGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAG
GCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGG
AAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACA
TGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCG
ATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGT
TCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCA
GCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCC
TGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCA
GTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCG
AAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGA
CGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCA
GGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGAC
ATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGA
CTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCG
ATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCA
AATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATA
ACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGT
CAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAG
TGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCC
AGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAG
ACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCT
TTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATC
CTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGA
TATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGG
ATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAG
ACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAA
GGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCC
GAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGG
CGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATG
ATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCA
GAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCG
CATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGA
AGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAAT
TGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTT
ACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATC
ATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGAC
CGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAG
TGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGA
GATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGG
TTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGA
TCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCG
GCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGA
TCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAG
CTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATA
TCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCA
TCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGT
ATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGA
CGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATG
GTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCA
TACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATT
CCTCCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCC
ACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTAC
GCACATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCT
GCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCG
CCGAAGAATTGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAA
TGGAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCA
AATAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGC
TCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATG
CTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGT
GCTGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTC
GGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCC
CGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAG
GTTGATGCGGCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTAC
GGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGT
CGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCG
CCCGGTATATCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCT
TGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGC
ATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCT
ACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATG
AAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCT
CAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0016887ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RFC4ATCC10864_003056Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003056-T1ATCC10864_003056-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003056-T1.cdsATCC10864_003056-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003056-T1.exon5ATCC10864_003056-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_003056-T1.exon4ATCC10864_003056-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003056-T1.exon3ATCC10864_003056-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003056-T1.exon2ATCC10864_003056-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003056-T1.exon1ATCC10864_003056-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00004
InterProIPR027417
InterProIPR008921
InterProIPR013748
PFAMPF13173
PFAMPF08542
InterProIPR003959
InterProIPR003593
Properties
Property NameValue
Productreplication factor C subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:265084..266389 -
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