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ATCC10864_003060-T1, ATCC10864_003060-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003060-T1
Unique NameATCC10864_003060-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:271840..273408-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003060-T1 ID=ATCC10864_003060-T1|Name=ATCC10864_003060-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1569bp|location=Sequence derived from alignment at MCQH01000058:271840..273408- (Aspergillus niger ATCC 10864)
ATGCGACCATTTCTCCGACGCTTTACGTCTCTCAAACGCCCCTCCGTCAT
GAAGCCGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGG
TGAGAGCGTTTACCCAGCCCGGGATCCTGGAATTTCCTTCCTTTTGTAAG
AGACTGCTTACTGACGGTTGCAGTTAGCTTGCAGTCGACCTAGCCTCGCG
ATTTAACGGGGAGATCATCAATGGCGATGCCATGCAAATGTATCGCGGTC
TCCCTATCATCACCAACCAGATCCCCGTCGAGGAGCGAAACGGTATCCCG
CATCACTTGATCAGCTGCGTTGAGCTCGAGGAACAGCCGTGGTTTGTCGG
CAGATTCAGAAGCGAAAGTCTCCGACTCATTGACGACATTCACGCCAGAG
GGAAAACTCCCGTCTTGGTCGGTGGTACCCATTACTATACACAGGCCGTC
TTGTTTAAAGACCAGCTACTTGGCGAGGATGCTACTGCAGACGATGTGCA
GGAGGAAGCCGTAAATCAATTAACGGAAGATAACGACCCGAAATCCTCGA
CTAAATGGCCCATCCTCGACGCTCCCACTGAGGTGGTTCTACAAAAACTG
AGAGAGGTCGATCCCGTCATGGCGGATCGATGGCACCCGAACGAAGCACG
CAAAATCCGTCGCTCCCTAGAGATATATTTCCAGACCGGCAGGCCCGCGT
CGGAAATTTACGCGGAGCAACAGCGGACAAAGCAGGCGGCCCTGATTCGG
GATGACTCCCTTACAGGTGCCGGTCACTTGCGATTCCCGACGATGATATT
CTGGGTGCACTCGGAGAAGGAGACGCTGAACAGTCGACTGGACAAGCGGG
TTGATGCAATGCTAGAGCAAGGGTTGATGACAGAAGCCAGGCAGATGTCG
GATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCTCCGTTGACCAGAGCCG
CGGCGTATGGGTGTCTATCGGATACAAGGAGCTAGCACCCTATTTCGAAG
CACTATATGCCGGCTCGGCGGATGAGGCCGAGCTAGAGACCCTCAAGAAA
TCCGGCATTGAGTCGATCAAGACTGCAACGCGGCAGTATGCCATGTCTCA
AATCAAATGGATCAGAAACAAGTTATGGCAGGCCCTTGCAGATGCGAGTT
CGACCAATCGTCTCTACCTCCTTGACAGCACTAATGTCGACGCATGGGAG
CAGAATATTACTGAGCCGTCCGAACGTCTTGTCCGTGCTCTGCTGGAGGA
TCAACCCACTCCCGATCCGAAGTCACTGTCAGAACTCGCAAGGACGGTCT
TGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTCGGGATCCGTCACCAAG
TGCAGGACTTGTGACATCTGCCACAAGACCATGATGGGCGATGAGCAATG
GCATATACACATCAACGGCTCGGTCCATAGGAGAGCTCTCAAGAGCGCCG
CCAAACGGGCTGCGCGTGACGAATATCTACGAAAGCGACAAAAGCTGCTA
CACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCGCGGAGCCAGATGTACA
AGCCCCTCCGTCCTCTTAA
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Coding sequence (CDS) from alignment at MCQH01000058:271840..273408-

>ATCC10864_003060-T1 ID=ATCC10864_003060-T1|Name=ATCC10864_003060-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2982bp|location=Sequence derived from alignment at MCQH01000058:271840..273408- (Aspergillus niger ATCC 10864)
CTTGCAGTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGA
TGCCATGCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCG
TCGAGGAGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTC
GAGGAACAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACT
CATTGACGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTA
CCCATTACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAG
GATGCTACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGA
AGATAACGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCA
CTGAGGTGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGAT
CGATGGCACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATA
TTTCCAGACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGA
CAAAGCAGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCAC
TTGCGATTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCT
GAACAGTCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGA
TGACAGAAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAG
GGCGTCTCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAA
GGAGCTAGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGG
CCGAGCTAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCA
ACGCGGCAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATG
GCAGGCCCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACA
GCACTAATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGT
CTTGTCCGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACT
GTCAGAACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATA
AGGAGTCGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAG
ACCATGATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCA
TAGGAGAGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATC
TACGAAAGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAA
TCTCCCGCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGCGACC
ATTTCTCCGACGCTTTACGTCTCTCAAACGCCCCTCCGTCATGAAGCCGC
TCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGCTTGCAGTC
GACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGATGCCATGCA
AATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCGTCGAGGAGC
GAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAACAG
CCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGACGA
CATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATTACT
ATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCTACT
GCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGAAGATAACGA
CCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCACTGAGGTGG
TTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGATCGATGGCAC
CCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATATTTCCAGAC
CGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGACAAAGCAGG
CGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCACTTGCGATTC
CCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAGTCG
ACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGATGACAGAAG
CCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCTCC
GTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAAGGAGCTAGC
ACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGGCCGAGCTAG
AGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCAACGCGGCAG
TATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATGGCAGGCCCT
TGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACAGCACTAATG
TCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGTCTTGTCCGT
GCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACTGTCAGAACT
CGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTCGG
GATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAGACCATGATG
GGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCATAGGAGAGC
TCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATCTACGAAAGC
GACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCGCG
GAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGCGACCATTTCTCCG
ACGCTTTACGTCTCTCAAACGCCCCTCCGTCATGAAGCCGCTCATCGCTG
TCGTTGGTGCCACAGGCACGGGCAAGTCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0052381tRNA dimethylallyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003060ATCC10864_003060Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003060-T1ATCC10864_003060-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003060-T1.cdsATCC10864_003060-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003060-T1.exon2ATCC10864_003060-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003060-T1.exon1ATCC10864_003060-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018022
InterProIPR039657
InterProIPR036236
PFAMPF01715
InterProIPR030666
InterProIPR027417
Properties
Property NameValue
NoteBUSCO:EOG09262C5Z
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:271840..273408 -
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