You are here

Home

ATCC10864_003062-T1, ATCC10864_003062-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003062-T1
Unique NameATCC10864_003062-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:275045..277550-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003062-T1 ID=ATCC10864_003062-T1|Name=ATCC10864_003062-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2506bp|location=Sequence derived from alignment at MCQH01000058:275045..277550- (Aspergillus niger ATCC 10864)
ATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGCATCC
CGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGCGCAG
ATAACAATGTTGCTCTCTGGGATCCCCGAGTAAGTTACTCCTCAAATATT
TGCTTGGTTACTTTCAAGATGGTGGTGGTTGATGCTGATGGTGGGGCCTT
GGGTGATGATGTAGGAGAGCTCGCAGCGCGGGGTCTATTCGCTTCTTGTC
GGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTACACATGCCCTTCCAC
CGGCACGAAACTTCTCTTGACTGGTTCTGTTGATCATACGGTCCGGTTAT
GGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTTCACGCGCATACTTTG
GAAGGACATACCGGCTCAGTCAATACTATCGCCGTAGCTGAAGGATTAGA
CATTATCGCATCGGGCGCAGCTGATGCTAGTGTGAAGATATGGAAGATCA
GCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAATCCATTCCCATGAAG
CCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCCGCTCCAAACGGAGTC
GAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGACCACCAACATTGTGC
AGATATATGCAGCAGAGAACACTCTTGTCGACCCCGATTTCAAGCTTGCG
GCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTCCTTGTCTTTCACATC
GGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGGCCTCGGCAAGCCAAG
ACAAGTATGTTCGACTCTGGCGATTCCAACGTGGAGAGGTTACGCAGGCC
ACGCCGGCGTGTGATGATGATCCTATGCTGGGTGGCTTCGAGCCCACGCT
ATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGACCAAATACTCTGTTA
CATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGGATTTACACGACTGCG
TGGAACCCTGACCCGGAGCGCCAGCAACTCCTCACTGCATCGGCAGACAA
CACATTGACCATTTGGGAACAAGATCCGGTTTCGGGAGTGTGGCTTTCTG
CCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGTTCCACTACAGCTACT
GGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGCCCCAGACGGCAAGCA
AGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCTCGTGGAAGTATGATG
CGGAAACCGATATGTGGGCGCAATCCTTGGGTATCTCAGGGCATGTGCGG
GCATCCAACGGGGTCCAATGGGAGCCTACTGGAGGATATCTCCTGTCGAC
AAGTGCGGATCAAACGACACGTCTGCATGCTCAGTGGCTGCGTGATGGAC
TGAAGTCATGGCATGAATTTTCACGACCTCAGATTCATGGATACGATTTG
AATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGGAAGA
AAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTATCGCACAGCTCCTAG
AGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGGGCATTACCGGACACG
GCACAGATTCCCGTCCTAGGACTGTCTAACCAGGCCCCGGCCGATGATGC
GCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCTCAGG
CCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCGCCATTGGAAGACCAG
CTCGCTCGCTACACATTATGGCCAGAGCATGAGAAGCTGTATGGTCACGG
GTACGAGATCTCAGCCGTGGCTGTCAGCCACGACCGCACACTTATTGCCA
CCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTGGTGCGTCTGTACGAC
ACGTCAGACTGGCACGAGATTCGTCCATCTCTTGCCGCGCACACCTTGAC
CATTACTAGTCTCGCCTTCTCCAGTGACGACCAGTACCTTCTGAGTGTCG
GACGTGACCGGCAATGGGCTGTTTACGAACGCAGCGAACAGGACCCCTCT
ACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCATTCCCGAATGATCCT
CGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCATCTTCGCAACCGCCG
GCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACCGAAGGCTCCTTTGAG
TGCAAATCCACCATCCCGCTGACAACGCCTGTCACTGCACTGGCGTTCCT
TCCGCAGATATATAGCAACTCCTTCTTCGTGGCCACGGGCGAGGAAAGCG
GAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGCCTGGAAGCCAGCCAA
TTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAAGGCGATCACGCAGCT
GTCCTGGCGGCCGGTACCGGATGTAGATACACGGGATTTTGCACTGGCGG
TAGCAAGTGAGGACACTTCAATTCGGATATATAGTTTCTCGGACATGGTC
TCATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000058:275045..277550-

>ATCC10864_003062-T1 ID=ATCC10864_003062-T1|Name=ATCC10864_003062-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4842bp|location=Sequence derived from alignment at MCQH01000058:275045..277550- (Aspergillus niger ATCC 10864)
GAGAGCTCGCAGCGCGGGGTCTATTCGCTTCTTGTCGGCCACACCGACAA
GGTCAGTGTCGTTCGGTTCTACACATGCCCTTCCACCGGCACGAAACTTC
TCTTGACTGGTTCTGTTGATCATACGGTCCGGTTATGGCGCCCCGATCCA
GTAAATCCCCGCCAGTTCGTTCACGCGCATACTTTGGAAGGACATACCGG
CTCAGTCAATACTATCGCCGTAGCTGAAGGATTAGACATTATCGCATCGG
GCGCAGCTGATGCTAGTGTGAAGATATGGAAGATCAGCGCGCAGGGAGAG
CCAAAGGGCGAACTCTTGGAATCCATTCCCATGAAGCCACGCTTCTTTCC
GTTGGCTTTGGCATTGACCCCGCTCCAAACGGAGTCGAACGATAGACCTG
TGGCTTTCGCGGTGGCAGGGACCACCAACATTGTGCAGATATATGCAGCA
GAGAACACTCTTGTCGACCCCGATTTCAAGCTTGCGGCTGTGCTGTCCGG
ACACGAGGCGTGGGTGCGCTCCTTGTCTTTCACATCGGATAAGCAAAGCA
AGATGGGCGATTTGCTGTTGGCCTCGGCAAGCCAAGACAAGTATGTTCGA
CTCTGGCGATTCCAACGTGGAGAGGTTACGCAGGCCACGCCGGCGTGTGA
TGATGATCCTATGCTGGGTGGCTTCGAGCCCACGCTATCGAATAAGGCGC
ACCAGTTCACCGCGGCGGGGACCAAATACTCTGTTACATTCGAAGCTCTC
TTGTTCGGAAATGAGGATTGGATTTACACGACTGCGTGGAACCCTGACCC
GGAGCGCCAGCAACTCCTCACTGCATCGGCAGACAACACATTGACCATTT
GGGAACAAGATCCGGTTTCGGGAGTGTGGCTTTCTGCCGAAAGAATGGGA
GAGATCAGTGTTCAGAAAGGTTCCACTACAGCTACTGGTAGTACTGGTGG
GTTCTGGATTGGTCTTTGGGCCCCAGACGGCAAGCAAGTCGTGAGTCTGG
GCCGCACTGGAAGCTGGCGCTCGTGGAAGTATGATGCGGAAACCGATATG
TGGGCGCAATCCTTGGGTATCTCAGGGCATGTGCGGGCATCCAACGGGGT
CCAATGGGAGCCTACTGGAGGATATCTCCTGTCGACAAGTGCGGATCAAA
CGACACGTCTGCATGCTCAGTGGCTGCGTGATGGACTGAAGTCATGGCAT
GAATTTTCACGACCTCAGATTCATGGATACGATTTGAATTGCGTGGATAC
CCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGGAAGAAAAGCTACTGCGAG
TATTTAACGAGCCTGCGCCTATCGCACAGCTCCTAGAGAAGCTTTCGGGG
TTCAAGCAGACGACCGAAGGGGCATTACCGGACACGGCACAGATTCCCGT
CCTAGGACTGTCTAACCAGGCCCCGGCCGATGATGCGCCTACAGGTGAAG
ATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCTCAGGCCAATCAGGCGCTT
TTGGCGGAATCGGAGCAACCGCCATTGGAAGACCAGCTCGCTCGCTACAC
ATTATGGCCAGAGCATGAGAAGCTGTATGGTCACGGGTACGAGATCTCAG
CCGTGGCTGTCAGCCACGACCGCACACTTATTGCCACCGCTTGCAAGGCG
AGCTCGATTGATCATGCCGTGGTGCGTCTGTACGACACGTCAGACTGGCA
CGAGATTCGTCCATCTCTTGCCGCGCACACCTTGACCATTACTAGTCTCG
CCTTCTCCAGTGACGACCAGTACCTTCTGAGTGTCGGACGTGACCGGCAA
TGGGCTGTTTACGAACGCAGCGAACAGGACCCCTCTACTTTCTCCCTTCT
AATTTCGAACCCGAAGGGTCATTCCCGAATGATCCTCGATGCCGCATGGG
CACCTGCGTCGGGAAAGCCCATCTTCGCAACCGCCGGCCGGGACAAGTCA
GTGAAGCTGTGGCAGAAGACCGAAGGCTCCTTTGAGTGCAAATCCACCAT
CCCGCTGACAACGCCTGTCACTGCACTGGCGTTCCTTCCGCAGATATATA
GCAACTCCTTCTTCGTGGCCACGGGCGAGGAAAGCGGAGCAGTGTCTGTC
TACCGAGTCGCAGTCGACAGCCTGGAAGCCAGCCAATTGTCAAGCATCGA
TAAGCTTGCATCTCCTTCGAAGGCGATCACGCAGCTGTCCTGGCGGCCGG
TACCGGATGTAGATACACGGGATTTTGCACTGGCGGTAGCAAGTGAGGAC
ACTTCAATTCGGATATATAGTTTCTCGGACATGGTCTCATAAATGGTCTC
CATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGCATCCCGCCGCCG
CTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGCGCAGATAACAAT
GTTGCTCTCTGGGATCCCCGAGAGAGCTCGCAGCGCGGGGTCTATTCGCT
TCTTGTCGGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTACACATGCC
CTTCCACCGGCACGAAACTTCTCTTGACTGGTTCTGTTGATCATACGGTC
CGGTTATGGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTTCACGCGCA
TACTTTGGAAGGACATACCGGCTCAGTCAATACTATCGCCGTAGCTGAAG
GATTAGACATTATCGCATCGGGCGCAGCTGATGCTAGTGTGAAGATATGG
AAGATCAGCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAATCCATTCC
CATGAAGCCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCCGCTCCAAA
CGGAGTCGAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGACCACCAAC
ATTGTGCAGATATATGCAGCAGAGAACACTCTTGTCGACCCCGATTTCAA
GCTTGCGGCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTCCTTGTCTT
TCACATCGGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGGCCTCGGCA
AGCCAAGACAAGTATGTTCGACTCTGGCGATTCCAACGTGGAGAGGTTAC
GCAGGCCACGCCGGCGTGTGATGATGATCCTATGCTGGGTGGCTTCGAGC
CCACGCTATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGACCAAATAC
TCTGTTACATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGGATTTACAC
GACTGCGTGGAACCCTGACCCGGAGCGCCAGCAACTCCTCACTGCATCGG
CAGACAACACATTGACCATTTGGGAACAAGATCCGGTTTCGGGAGTGTGG
CTTTCTGCCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGTTCCACTAC
AGCTACTGGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGCCCCAGACG
GCAAGCAAGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCTCGTGGAAG
TATGATGCGGAAACCGATATGTGGGCGCAATCCTTGGGTATCTCAGGGCA
TGTGCGGGCATCCAACGGGGTCCAATGGGAGCCTACTGGAGGATATCTCC
TGTCGACAAGTGCGGATCAAACGACACGTCTGCATGCTCAGTGGCTGCGT
GATGGACTGAAGTCATGGCATGAATTTTCACGACCTCAGATTCATGGATA
CGATTTGAATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGTGTCCGGCG
CGGAAGAAAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTATCGCACAG
CTCCTAGAGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGGGCATTACC
GGACACGGCACAGATTCCCGTCCTAGGACTGTCTAACCAGGCCCCGGCCG
ATGATGCGCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAGTTGGCAAA
GCTCAGGCCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCGCCATTGGA
AGACCAGCTCGCTCGCTACACATTATGGCCAGAGCATGAGAAGCTGTATG
GTCACGGGTACGAGATCTCAGCCGTGGCTGTCAGCCACGACCGCACACTT
ATTGCCACCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTGGTGCGTCT
GTACGACACGTCAGACTGGCACGAGATTCGTCCATCTCTTGCCGCGCACA
CCTTGACCATTACTAGTCTCGCCTTCTCCAGTGACGACCAGTACCTTCTG
AGTGTCGGACGTGACCGGCAATGGGCTGTTTACGAACGCAGCGAACAGGA
CCCCTCTACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCATTCCCGAA
TGATCCTCGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCATCTTCGCA
ACCGCCGGCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACCGAAGGCTC
CTTTGAGTGCAAATCCACCATCCCGCTGACAACGCCTGTCACTGCACTGG
CGTTCCTTCCGCAGATATATAGCAACTCCTTCTTCGTGGCCACGGGCGAG
GAAAGCGGAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGCCTGGAAGC
CAGCCAATTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAAGGCGATCA
CGCAGCTGTCCTGGCGGCCGGTACCGGATGTAGATACACGGGATTTTGCA
CTGGCGGTAGCAAGTGAGGACACTTCAATTCGGATATATAGTTTCTCGGA
CATGGTCTCATAAATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGG
GCAATAGGCATCCCGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTT
GCCTTTGGCGCAGATAACAATGTTGCTCTCTGGGATCCCCGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003062ATCC10864_003062Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003062-T1ATCC10864_003062-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003062-T1.cdsATCC10864_003062-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003062-T1.exon2ATCC10864_003062-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003062-T1.exon1ATCC10864_003062-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR011047
InterProIPR037289
InterProIPR017986
InterProIPR001680
InterProIPR036322
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:275045..277550 -
Powered by Drupal