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ATCC10864_003117-T1, ATCC10864_003117-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003117-T1
Unique NameATCC10864_003117-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:102506..103411+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003117-T1 ID=ATCC10864_003117-T1|Name=ATCC10864_003117-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=906bp|location=Sequence derived from alignment at MCQH01000066:102506..103411+ (Aspergillus niger ATCC 10864)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGTAAGTTGTTCA
TTCGCTTCACTTGACCAGTAACCCCTTACTAACCTCCTGACCTTGACAGG
CTGTGGAAGTCAGTAAGCTGCATGCGTATAGTTGGCGCTCGAACACCCCT
CAGGAGACGAGCGAAGCCGGCTTGGGATGGACAGGCAACTGACATACACC
CGACATTACTAGGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACAT
TAACTTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAAT
TACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAAT
GCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTA
ATTTCCGGGAAACGGCGGATATGATCGCAAAGGTATGTTGAGGCCAACAG
GTGGAGTAATTGGTCGAAAGTATATGGGCTTCTGTGGGCTGACGAGTTTA
ATGCCCACTGCAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCG
TCACCAATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAA
AACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGA
TGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGG
AGATGGTAAGACGGCGTACTGCAGGGAGTTGATCTGTTCTCTGCTAGCCA
CTTCCATGCATGTATTTGTGCTAATTCTGGGAACAGGTGCAAATGCAGAT
CGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAA
TGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAG
GAGTAA
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Coding sequence (CDS) from alignment at MCQH01000066:102506..103411+

>ATCC10864_003117-T1 ID=ATCC10864_003117-T1|Name=ATCC10864_003117-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2280bp|location=Sequence derived from alignment at MCQH01000066:102506..103411+ (Aspergillus niger ATCC 10864)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGACGAGAGTTGA
CAAAGTGAACGCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGC
AACTTTGCCAGGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTG
GAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGC
CAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGA
TCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACC
AATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCC
GTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGC
TGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATG
GTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGA
TGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGA
TGCCACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATT
GGGGAAGAGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAAC
TTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACC
AAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGA
CTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTT
CCGGGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCA
ACATCGCACCCACCGTCACCAATTGGACGAGTGACAACAACCAATTCTCT
CTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGA
CGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTC
TGCGGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTG
AGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGT
ACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTG
CAACAAAAGCATCTAGGATTGGGGAAGAGACGAGAGTTGACAAAGTGAAC
GCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGCAACTTTGCCA
GGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAGATGG
GTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGC
GTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAGGT
TGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAATTGGACGA
GTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGAT
TTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTC
CAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGC
AGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACG
GAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGA
TGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGA
CGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAACTTACGGTACA
ATTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACCAAGAAGTGAA
CAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGG
ACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACG
GCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACC
CACCGTCACCAATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTG
AAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCT
CAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGC
ATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTT
TGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATT
GAGGATGAGATGCCACCCGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003117ATCC10864_003117Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003117-T1.exon1ATCC10864_003117-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003117-T1.exon2ATCC10864_003117-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003117-T1.exon3ATCC10864_003117-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003117-T1.exon4ATCC10864_003117-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003117-T1.cdsATCC10864_003117-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003117-T1ATCC10864_003117-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016721
InterProIPR007194
PFAMPF04051
InterProIPR024096
Properties
Property NameValue
NoteBUSCO:EOG09264OM7
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:102506..103411 +
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