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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:115395..116781- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003120-T1 ID=ATCC10864_003120-T1|Name=ATCC10864_003120-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1387bp|location=Sequence derived from alignment at MCQH01000066:115395..116781- (Aspergillus niger ATCC 10864)
ATGTCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGA
CGCCGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGA
CCGGCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGG
GAGCCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCAC
CCTCTGGTAAGCTTGCCCAATGCGGTATCTTCTTGGCCGCGCTGTTGCTG
ACTCGTTTTGCCTTTTAGGATGGGTGAGCTTGAGCCCTGGATCGATGAGA
ACTTCGTTCGCAACCTCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAG
ATGATCCGCGACAAGTTTTCTGGGTGAGTACATAATAACGCTGGATTTGG
TTTGAAGGCGATCCTAATGTTGGTAGTAGGAGCAACGCCGGTTACTGCTT
CGTCGACTTCGCGTCCCCTGCCGCTGCCGCCAAGGCTCTGTCCCTGAACG
GCACCCCCATGCCTAACACCAACCGTCTGTTCAAGCTCAACTGGGCTACC
GGTGGTGGTCTTGCCGACCGCAGGTAAGGAGAAGATGCCCCCACCCCCAA
CATCCTCAAACCACAAGCTAACATTCCATATAGCCGTGATGACCGTGGCC
CTGAGTACTCGATCTTCGTTGGTGACTTGGGCCCTGAGGTCAACGAGTAT
GTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCGTCCTGCAAGTCTGCCAA
GATCATGACCGACCCTATCAGCGGCATGTCTCGTGGCTACGGCTTCGTCC
GCTTCTCCGACGAGAACGACCAGCAGCGGGCTCTGAGCGAGATGCAGGGT
GTGTACTGTGGCAACCGTCCCATGCGCATCTCTACTGCTACTCCCAAGAA
CAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCATGGGCATGCCCGGCCCCG
CGGGCATGTACCCTCCCATGGGCGCTCCCCCCATGGGCTTCTACGGTGCT
CCCCAGCCCATGAACCAGTTCACCGACCCCAACAACACCACCGTTTTCGT
TGGCGGTCTGTCTGGCTACGTTACTGAGGACGAGCTCCGCTCTTTCTTCC
AGGGCTTCGGTGAAATCACCTACGTCAAGATCCCCCCTGGAAAGGGCTGC
GGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCTGAGATGGCCATCAACCA
GATGCAGGGATACCCCATTGGAAACTCCCGTGTGCGTCTGAGCTGGGGTC
GCTCTCAGAACAACTCTGGCCCTGCCGGCAGCCCCTACCGTCCTGCTCCC
CCTCCGCCTCCCATGTACCCCTCCATGGGCATGCCCCCCGCTCACGGATA
CGGCGGCTTCGCGCCTATGAAGGTCGGTTCCCCTTGA back to topCoding sequence (CDS) from alignment at MCQH01000066:115395..116781- >ATCC10864_003120-T1 ID=ATCC10864_003120-T1|Name=ATCC10864_003120-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4836bp|location=Sequence derived from alignment at MCQH01000066:115395..116781- (Aspergillus niger ATCC 10864)
CCGTGATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTTGGGCC
CTGAGGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCG
TCCTGCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATGTCTCG
TGGCTACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCGGGCTC
TGAGCGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCATCTCT
ACTGCTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCAT
GGGCATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCCCCCCA
TGGGCTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACCCCAAC
AACACCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAGGACGA
GCTCCGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAAGATCC
CCCCTGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCT
GAGATGGCCATCAACCAGATGCAGGGATACCCCATTGGAAACTCCCGTGT
GCGTCTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGGCAGCC
CCTACCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGGGCATG
CCCCCCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGGTCGGTTCCCC
TTGAGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCCTGCCGCT
GCCGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACACCAACCG
TCTGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGACCGCAGGA
TGGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCAACCTCTGG
TTCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGACAAGTTTTC
TGGATGTCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGC
TGACGCCGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCA
TGACCGGCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCC
GGGGAGCCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGAC
CACCCTCTGCCGTGATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTG
ACTTGGGCCCTGAGGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGC
CGCTTCCCGTCCTGCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGG
CATGTCTCGTGGCTACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGC
AGCGGGCTCTGAGCGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATG
CGCATCTCTACTGCTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGC
CGGTGCCATGGGCATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCG
CTCCCCCCATGGGCTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACC
GACCCCAACAACACCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTAC
TGAGGACGAGCTCCGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACG
TCAAGATCCCCCCTGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGC
CATGCTGCTGAGATGGCCATCAACCAGATGCAGGGATACCCCATTGGAAA
CTCCCGTGTGCGTCTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTG
CCGGCAGCCCCTACCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCC
ATGGGCATGCCCCCCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGGT
CGGTTCCCCTTGAGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCC
CCTGCCGCTGCCGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAA
CACCAACCGTCTGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCG
ACCGCAGGATGGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGC
AACCTCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGA
CAAGTTTTCTGGATGTCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCA
CCCTGCTGCTGACGCCGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGG
ACACCGCCATGACCGGCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGT
CCTGCTCCCGGGGAGCCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGA
GGGAAAGACCACCCTCTGCCGTGATGACCGTGGCCCTGAGTACTCGATCT
TCGTTGGTGACTTGGGCCCTGAGGTCAACGAGTATGTCCTCGTTTCTCTC
TTCCAGAGCCGCTTCCCGTCCTGCAAGTCTGCCAAGATCATGACCGACCC
TATCAGCGGCATGTCTCGTGGCTACGGCTTCGTCCGCTTCTCCGACGAGA
ACGACCAGCAGCGGGCTCTGAGCGAGATGCAGGGTGTGTACTGTGGCAAC
CGTCCCATGCGCATCTCTACTGCTACTCCCAAGAACAAGGGCCCCAGCCT
TGGTGCTGCCGGTGCCATGGGCATGCCCGGCCCCGCGGGCATGTACCCTC
CCATGGGCGCTCCCCCCATGGGCTTCTACGGTGCTCCCCAGCCCATGAAC
CAGTTCACCGACCCCAACAACACCACCGTTTTCGTTGGCGGTCTGTCTGG
CTACGTTACTGAGGACGAGCTCCGCTCTTTCTTCCAGGGCTTCGGTGAAA
TCACCTACGTCAAGATCCCCCCTGGAAAGGGCTGCGGTTTCGTCCAGTTC
GTCCAGCGCCATGCTGCTGAGATGGCCATCAACCAGATGCAGGGATACCC
CATTGGAAACTCCCGTGTGCGTCTGAGCTGGGGTCGCTCTCAGAACAACT
CTGGCCCTGCCGGCAGCCCCTACCGTCCTGCTCCCCCTCCGCCTCCCATG
TACCCCTCCATGGGCATGCCCCCCGCTCACGGATACGGCGGCTTCGCGCC
TATGAAGGTCGGTTCCCCTTGAGAGCAACGCCGGTTACTGCTTCGTCGAC
TTCGCGTCCCCTGCCGCTGCCGCCAAGGCTCTGTCCCTGAACGGCACCCC
CATGCCTAACACCAACCGTCTGTTCAAGCTCAACTGGGCTACCGGTGGTG
GTCTTGCCGACCGCAGGATGGGTGAGCTTGAGCCCTGGATCGATGAGAAC
TTCGTTCGCAACCTCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAGAT
GATCCGCGACAAGTTTTCTGGATGTCTTTCCAGAACTTTGATTCTTTCCA
AAACCAGCACCCTGCTGCTGACGCCGCCGCTGCCGCTCCTGGCGCTCCTG
CTACCGCGGACACCGCCATGACCGGCCAGGCTGACCCTACCACTGCCCCC
TTCCAGGGTCCTGCTCCCGGGGAGCCCACTGCTGCCCCTGTTCCCCAGCA
GGCTAACGAGGGAAAGACCACCCTCTGCCGTGATGACCGTGGCCCTGAGT
ACTCGATCTTCGTTGGTGACTTGGGCCCTGAGGTCAACGAGTATGTCCTC
GTTTCTCTCTTCCAGAGCCGCTTCCCGTCCTGCAAGTCTGCCAAGATCAT
GACCGACCCTATCAGCGGCATGTCTCGTGGCTACGGCTTCGTCCGCTTCT
CCGACGAGAACGACCAGCAGCGGGCTCTGAGCGAGATGCAGGGTGTGTAC
TGTGGCAACCGTCCCATGCGCATCTCTACTGCTACTCCCAAGAACAAGGG
CCCCAGCCTTGGTGCTGCCGGTGCCATGGGCATGCCCGGCCCCGCGGGCA
TGTACCCTCCCATGGGCGCTCCCCCCATGGGCTTCTACGGTGCTCCCCAG
CCCATGAACCAGTTCACCGACCCCAACAACACCACCGTTTTCGTTGGCGG
TCTGTCTGGCTACGTTACTGAGGACGAGCTCCGCTCTTTCTTCCAGGGCT
TCGGTGAAATCACCTACGTCAAGATCCCCCCTGGAAAGGGCTGCGGTTTC
GTCCAGTTCGTCCAGCGCCATGCTGCTGAGATGGCCATCAACCAGATGCA
GGGATACCCCATTGGAAACTCCCGTGTGCGTCTGAGCTGGGGTCGCTCTC
AGAACAACTCTGGCCCTGCCGGCAGCCCCTACCGTCCTGCTCCCCCTCCG
CCTCCCATGTACCCCTCCATGGGCATGCCCCCCGCTCACGGATACGGCGG
CTTCGCGCCTATGAAGGTCGGTTCCCCTTGAGAGCAACGCCGGTTACTGC
TTCGTCGACTTCGCGTCCCCTGCCGCTGCCGCCAAGGCTCTGTCCCTGAA
CGGCACCCCCATGCCTAACACCAACCGTCTGTTCAAGCTCAACTGGGCTA
CCGGTGGTGGTCTTGCCGACCGCAGGATGGGTGAGCTTGAGCCCTGGATC
GATGAGAACTTCGTTCGCAACCTCTGGTTCCAGATGGGTGAGCAGGTCAA
CGTTAAGATGATCCGCGACAAGTTTTCTGGATGTCTTTCCAGAACTTTGA
TTCTTTCCAAAACCAGCACCCTGCTGCTGACGCCGCCGCTGCCGCTCCTG
GCGCTCCTGCTACCGCGGACACCGCCATGACCGGCCAGGCTGACCCTACC
ACTGCCCCCTTCCAGGGTCCTGCTCCCGGGGAGCCCACTGCTGCCCCTGT
TCCCCAGCAGGCTAACGAGGGAAAGACCACCCTCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00076 |
| InterPro | IPR035979 |
| InterPro | IPR000504 |
| InterPro | IPR012677 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:115395..116781 - |
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