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ATCC10864_003169-T1, ATCC10864_003169-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003169-T1
Unique NameATCC10864_003169-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:273783..275287-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003169-T1 ID=ATCC10864_003169-T1|Name=ATCC10864_003169-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1505bp|location=Sequence derived from alignment at MCQH01000066:273783..275287- (Aspergillus niger ATCC 10864)
ATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAA
CGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGG
CTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAAC
TCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGA
TGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGG
TGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGCACTATC
TACCGCACTGGCACCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTC
CGACTTTGAGTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTG
GATATGTGTACCACCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGA
CTCCAGGACGTGAGCAATTTCGCGGTTCATGATATTATCCTGGTGGACGC
GCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACA
ACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTG
TGGGGTAGCAACATCTGGGTCCACGATGTATGTCCCACGTTATGTCACAA
TAAAAAGCGCTCGGTGCTGACCCATGTATCCAGGTCGAGGTGACCAACAA
GGATGAATGTGTCACGGTCAAGGTAAGGGCCATCTGGTATGATCACCCCT
AGCTCGTGTACTGACAATCCGCAGAGCCCTGCCAACAACATCCTTGTGGA
AAGTATCTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCG
CGGACACCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGT
TCCAACCAGATGTACATGATCAAGAGCAACGGCGGCAGTGGGACAGTCAA
TAACACCGTTCTGGAGAACTTCATTGGTATGTTTGACCCACTCGAACGAG
GTATATACAGCCTCTGACTAATGTGGTTGCAGGACACGGCAACGCTTATT
CTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGAC
GGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGC
GGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCC
CTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGC
GATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTCTGCCT
CGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCA
CGGCGCCCTCGGGATATTCGGCAACCACGATGGCAGCGGATCTCACCACG
GACTTTGGCACGACCGCGTCCATCCCCATCCCTACCATCCCGACTTCCTT
CTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGG
CATGA
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Coding sequence (CDS) from alignment at MCQH01000066:273783..275287-

>ATCC10864_003169-T1 ID=ATCC10864_003169-T1|Name=ATCC10864_003169-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5364bp|location=Sequence derived from alignment at MCQH01000066:273783..275287- (Aspergillus niger ATCC 10864)
GACACGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATG
ACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAA
CTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGG
TATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCC
ATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTA
TGGCGATGGATTCTGCCTCGAAGACAGCGATTCCACCACCTCGTACACGA
CCACCCAGACTGTCACCACGGCGCCCTCGGGATATTCGGCAACCACGATG
GCAGCGGATCTCACCACGGACTTTGGCACGACCGCGTCCATCCCCATCCC
TACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGG
CATCGGCTGCCACCACGGCATGAAGCCCTGCCAACAACATCCTTGTGGAA
AGTATCTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGC
GGACACCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTT
CCAACCAGATGTACATGATCAAGAGCAACGGCGGCAGTGGGACAGTCAAT
AACACCGTTCTGGAGAACTTCATTGGTCGAGGTGACCAACAAGGATGAAT
GTGTCACGGTCAAGATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCC
CCGTTGCTGGTCAACGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTC
GGCACACTCCAAGGCTGCGACCAAGACGTGTAACGTGCTGGACTATGGTG
CTGTGGCGGACAACTCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGG
GATGCGTGCTCGGATGGAGGTCTGATCTATATTCCTCCTGGTGATTATGC
GATGGATACCTGGGTGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATAT
TAGACGGCACTATCTACCGCACTGGCACCGACGGAGGTAATATGATTCTA
GTGGAGAATTCTTCCGACTTTGAGTTGTACAGCAACTCGTCCTCTGGTGC
CGTCCAGGGATTTGGATATGTGTACCACCGGGAGGGTGATCTTGATGGGC
CACGGATTTTGCGACTCCAGGACGTGAGCAATTTCGCGGTTCATGATATT
ATCCTGGTGGACGCGCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGA
TGGGGAGGTGTACAACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGG
ATGGGATTGATGTGTGGGGTAGCAACATCTGGGTCCACGATGACACGGCA
ACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTG
GATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGG
AACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAG
ACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACC
GAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGG
ATTCTGCCTCGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGA
CTGTCACCACGGCGCCCTCGGGATATTCGGCAACCACGATGGCAGCGGAT
CTCACCACGGACTTTGGCACGACCGCGTCCATCCCCATCCCTACCATCCC
GACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTG
CCACCACGGCATGAAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTAC
TGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGA
TATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGA
TGTACATGATCAAGAGCAACGGCGGCAGTGGGACAGTCAATAACACCGTT
CTGGAGAACTTCATTGGTCGAGGTGACCAACAAGGATGAATGTGTCACGG
TCAAGATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTG
GTCAACGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTC
CAAGGCTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGG
ACAACTCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGC
TCGGATGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATAC
CTGGGTGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGCA
CTATCTACCGCACTGGCACCGACGGAGGTAATATGATTCTAGTGGAGAAT
TCTTCCGACTTTGAGTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGG
ATTTGGATATGTGTACCACCGGGAGGGTGATCTTGATGGGCCACGGATTT
TGCGACTCCAGGACGTGAGCAATTTCGCGGTTCATGATATTATCCTGGTG
GACGCGCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGT
GTACAACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTG
ATGTGTGGGGTAGCAACATCTGGGTCCACGATGACACGGCAACGCTTATT
CTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGAC
GGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGC
GGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCC
CTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGC
GATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTCTGCCT
CGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCA
CGGCGCCCTCGGGATATTCGGCAACCACGATGGCAGCGGATCTCACCACG
GACTTTGGCACGACCGCGTCCATCCCCATCCCTACCATCCCGACTTCCTT
CTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGG
CATGAAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGG
AGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGA
TATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGA
TCAAGAGCAACGGCGGCAGTGGGACAGTCAATAACACCGTTCTGGAGAAC
TTCATTGGTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGATGC
CTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGC
CAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGC
GACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCA
CCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGA
GGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTC
TCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGCACTATCTACC
GCACTGGCACCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTCCGAC
TTTGAGTTGTACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTGGATA
TGTGTACCACCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGACTCC
AGGACGTGAGCAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCG
GCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACAT
GGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGG
GTAGCAACATCTGGGTCCACGATGACACGGCAACGCTTATTCTCTGGACG
TTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAA
CTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGC
CGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCG
ACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAG
ACCTACACCTGCGAGTCGGCGTATGGCGATGGATTCTGCCTCGAAGACAG
CGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCACGGCGCCCT
CGGGATATTCGGCAACCACGATGGCAGCGGATCTCACCACGGACTTTGGC
ACGACCGCGTCCATCCCCATCCCTACCATCCCGACTTCCTTCTATCCCGG
CTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGGCATGAAGCC
CTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAGGT
TGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTGTA
CCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAGCA
ACGGCGGCAGTGGGACAGTCAATAACACCGTTCTGGAGAACTTCATTGGT
CGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGATGCCTGCTCTTC
CCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCC
GGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCAAGAC
GTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGACATTG
GGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATC
TATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGTCGGG
AGGCAAGGCGACCGCCATCATATTAGACGGCACTATCTACCGCACTGGCA
CCGACGGAGGTAATATGATTCTAGTGGAGAATTCTTCCGACTTTGAGTTG
TACAGCAACTCGTCCTCTGGTGCCGTCCAGGGATTTGGATATGTGTACCA
CCGGGAGGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGACGTGA
GCAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTTCCAC
TTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCATTCG
CGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACA
TCTGGGTCCACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003169ATCC10864_003169Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003169-T1ATCC10864_003169-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003169-T1.cdsATCC10864_003169-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003169-T1.exon4ATCC10864_003169-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003169-T1.exon3ATCC10864_003169-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003169-T1.exon2ATCC10864_003169-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003169-T1.exon1ATCC10864_003169-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:273783..275287 -
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