|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:418323..420010- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003213-T1 ID=ATCC10864_003213-T1|Name=ATCC10864_003213-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1688bp|location=Sequence derived from alignment at MCQH01000066:418323..420010- (Aspergillus niger ATCC 10864)
ATGTTCAGATCATGCTATACTTGCCGGCGTAGGCATGTTGAATGCCAAAT
GACCCATCCGCCTTGTAAGAAGTGTCAAAAGGCAGGGCTAGAGTGCCTTC
AAAAAAGACCCCTCCGTTGGGTCGATGGGCCGGCTTTCCGGAATAGAGCG
CGAACTTCACAAGCTCACCAAAGAGATAAATCCAACACCCTCAACAAAGG
TGATTACGGGGAATCTTGTCTCTATGAATCTAGGCTGGCAGAATCAACAT
TGGAGGCCACAAACGCTGTGGAAAGGAAAGGACAGTCGGCCATTTCGCAC
AAGGGAGACCACATCAGCATCCACATAAGCATTCCGCCAAGTTTGAAGGA
TCCTTCCTTTGACGCCCTGGATGATGCATCCATGTATTACTTGAATTATT
GTCAGTGTGCTCAAGCAAATGCGATGCGAGTCACGCTTACTGATGAAATC
AGACAGCAAATGTGTGTGCAAGTTGTTTGTCATGTTCGACAGCCAGCGAA
ACCCTTTGAGACAACTTATTCCGGCAGCGTTGGCTAATCCAGCCTTGACT
GCCTCTGTGATGGCCCTCTCAGCTCGGCACATGGCAAATGGCCAGCAAAT
ACAATGTCAGGGGCAGGACGAAGACCACGCGACGCGCTTCAAGGCACATA
CTGATGGCTTAATGTACAAACAAAAGGCCATATGCGGGCTGATCCAGGCG
CTCAATGATCCAATATCGAGGTCGAGAGATGTCCTTATTCTGAGCGCGTT
TATATTGATTTTCCTCGATCTTTTAGAGTCGGGGCGAGACCAGTGGAAAT
CCCACCTAGGGGGCATCAAAAAACTTGTTAGTGGCATGCATACTGCGGAG
ACTTCTCGGCATTTAGAAGCAACTATTGAAGGCACGCGGGAATTTATAAT
GGGGCAGATTTACCTGTGAGGCTCCAGCATCAAATTATATGACGAAAAGC
GCAATTTAACATGTTGCCCGTTGCAGGATCGAAACACTTGGTGCCACATT
TGGCGGTCGCGAACTATTGTCTGGGGCGGATATTTCGCCCCAACAAGCTG
CACCGCTGCAGATGAGCATCGACAGGGCTTATATCGGTTGCCCTGAGTAC
CTTCTATATGCCGTTCGCTTCTTTTCAAAAGCTAGGGACCGCTTAGCTGA
TCCGAGGCACCTTGATACGCCTGAGACCTATTCTTTCCTCCAGTCAGTCA
CAAGTATGCTCGATTCTACCATGAGCTTTGATTGCCACAATTGGGTGACC
GAGACCCTGCGAGCCTCATCCACCACTTCAACAACGCGAAATATACAGTC
TCTCGAACATTTAGCCCAGGCATATAAATCTGCAACTCTAATCTACGGTT
GGCGGGTCTGTGATCGGCTTACTGGAAATGAAACCCCCTTGGATGACCTG
GTAAAAGCGCTGGTCGTAGAGGCTGAAACACTGAGGAGGGATGAAGCGCT
ATTCAAATGCATACTATGGCCTCTTTTTATTGCGGGGCTGGAGTCCCAAG
AGCAATCCCAAAAGAGCCACATCAGGAATTGTCTGGAGAGCTTTTGGTTT
GAGACCAAATGCATCAATGTGATAAATGCGGTAACAATACTCGAAAGGTT
CTGGGTGGACCCATCGAACGTGGAAGACGACTCAAGCAGCTGGGTTTTCC
GCATGGGCCAGCTAGAAGGCGATTGGCTATTAATCTAA back to topCoding sequence (CDS) from alignment at MCQH01000066:418323..420010- >ATCC10864_003213-T1 ID=ATCC10864_003213-T1|Name=ATCC10864_003213-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4725bp|location=Sequence derived from alignment at MCQH01000066:418323..420010- (Aspergillus niger ATCC 10864)
GATCGAAACACTTGGTGCCACATTTGGCGGTCGCGAACTATTGTCTGGGG
CGGATATTTCGCCCCAACAAGCTGCACCGCTGCAGATGAGCATCGACAGG
GCTTATATCGGTTGCCCTGAGTACCTTCTATATGCCGTTCGCTTCTTTTC
AAAAGCTAGGGACCGCTTAGCTGATCCGAGGCACCTTGATACGCCTGAGA
CCTATTCTTTCCTCCAGTCAGTCACAAGTATGCTCGATTCTACCATGAGC
TTTGATTGCCACAATTGGGTGACCGAGACCCTGCGAGCCTCATCCACCAC
TTCAACAACGCGAAATATACAGTCTCTCGAACATTTAGCCCAGGCATATA
AATCTGCAACTCTAATCTACGGTTGGCGGGTCTGTGATCGGCTTACTGGA
AATGAAACCCCCTTGGATGACCTGGTAAAAGCGCTGGTCGTAGAGGCTGA
AACACTGAGGAGGGATGAAGCGCTATTCAAATGCATACTATGGCCTCTTT
TTATTGCGGGGCTGGAGTCCCAAGAGCAATCCCAAAAGAGCCACATCAGG
AATTGTCTGGAGAGCTTTTGGTTTGAGACCAAATGCATCAATGTGATAAA
TGCGGTAACAATACTCGAAAGGTTCTGGGTGGACCCATCGAACGTGGAAG
ACGACTCAAGCAGCTGGGTTTTCCGCATGGGCCAGCTAGAAGGCGATTGG
CTATTAATCTAAACAGCAAATGTGTGTGCAAGTTGTTTGTCATGTTCGAC
AGCCAGCGAAACCCTTTGAGACAACTTATTCCGGCAGCGTTGGCTAATCC
AGCCTTGACTGCCTCTGTGATGGCCCTCTCAGCTCGGCACATGGCAAATG
GCCAGCAAATACAATGTCAGGGGCAGGACGAAGACCACGCGACGCGCTTC
AAGGCACATACTGATGGCTTAATGTACAAACAAAAGGCCATATGCGGGCT
GATCCAGGCGCTCAATGATCCAATATCGAGGTCGAGAGATGTCCTTATTC
TGAGCGCGTTTATATTGATTTTCCTCGATCTTTTAGAGTCGGGGCGAGAC
CAGTGGAAATCCCACCTAGGGGGCATCAAAAAACTTGTTAGTGGCATGCA
TACTGCGGAGACTTCTCGGCATTTAGAAGCAACTATTGAAGGCACGCGGG
AATTTATAATGGGGCAGATTTACCTATGTTCAGATCATGCTATACTTGCC
GGCGTAGGCATGTTGAATGCCAAATGACCCATCCGCCTTGTAAGAAGTGT
CAAAAGGCAGGGCTAGAGTGCCTTCAAAAAAGACCCCTCCGTTGGGTCGA
TGGGCCGGCTTTCCGGAATAGAGCGCGAACTTCACAAGCTCACCAAAGAG
ATAAATCCAACACCCTCAACAAAGGTGATTACGGGGAATCTTGTCTCTAT
GAATCTAGGCTGGCAGAATCAACATTGGAGGCCACAAACGCTGTGGAAAG
GAAAGGACAGTCGGCCATTTCGCACAAGGGAGACCACATCAGCATCCACA
TAAGCATTCCGCCAAGTTTGAAGGATCCTTCCTTTGACGCCCTGGATGAT
GCATCCATGTATTACTTGAATTATTGATCGAAACACTTGGTGCCACATTT
GGCGGTCGCGAACTATTGTCTGGGGCGGATATTTCGCCCCAACAAGCTGC
ACCGCTGCAGATGAGCATCGACAGGGCTTATATCGGTTGCCCTGAGTACC
TTCTATATGCCGTTCGCTTCTTTTCAAAAGCTAGGGACCGCTTAGCTGAT
CCGAGGCACCTTGATACGCCTGAGACCTATTCTTTCCTCCAGTCAGTCAC
AAGTATGCTCGATTCTACCATGAGCTTTGATTGCCACAATTGGGTGACCG
AGACCCTGCGAGCCTCATCCACCACTTCAACAACGCGAAATATACAGTCT
CTCGAACATTTAGCCCAGGCATATAAATCTGCAACTCTAATCTACGGTTG
GCGGGTCTGTGATCGGCTTACTGGAAATGAAACCCCCTTGGATGACCTGG
TAAAAGCGCTGGTCGTAGAGGCTGAAACACTGAGGAGGGATGAAGCGCTA
TTCAAATGCATACTATGGCCTCTTTTTATTGCGGGGCTGGAGTCCCAAGA
GCAATCCCAAAAGAGCCACATCAGGAATTGTCTGGAGAGCTTTTGGTTTG
AGACCAAATGCATCAATGTGATAAATGCGGTAACAATACTCGAAAGGTTC
TGGGTGGACCCATCGAACGTGGAAGACGACTCAAGCAGCTGGGTTTTCCG
CATGGGCCAGCTAGAAGGCGATTGGCTATTAATCTAAACAGCAAATGTGT
GTGCAAGTTGTTTGTCATGTTCGACAGCCAGCGAAACCCTTTGAGACAAC
TTATTCCGGCAGCGTTGGCTAATCCAGCCTTGACTGCCTCTGTGATGGCC
CTCTCAGCTCGGCACATGGCAAATGGCCAGCAAATACAATGTCAGGGGCA
GGACGAAGACCACGCGACGCGCTTCAAGGCACATACTGATGGCTTAATGT
ACAAACAAAAGGCCATATGCGGGCTGATCCAGGCGCTCAATGATCCAATA
TCGAGGTCGAGAGATGTCCTTATTCTGAGCGCGTTTATATTGATTTTCCT
CGATCTTTTAGAGTCGGGGCGAGACCAGTGGAAATCCCACCTAGGGGGCA
TCAAAAAACTTGTTAGTGGCATGCATACTGCGGAGACTTCTCGGCATTTA
GAAGCAACTATTGAAGGCACGCGGGAATTTATAATGGGGCAGATTTACCT
ATGTTCAGATCATGCTATACTTGCCGGCGTAGGCATGTTGAATGCCAAAT
GACCCATCCGCCTTGTAAGAAGTGTCAAAAGGCAGGGCTAGAGTGCCTTC
AAAAAAGACCCCTCCGTTGGGTCGATGGGCCGGCTTTCCGGAATAGAGCG
CGAACTTCACAAGCTCACCAAAGAGATAAATCCAACACCCTCAACAAAGG
TGATTACGGGGAATCTTGTCTCTATGAATCTAGGCTGGCAGAATCAACAT
TGGAGGCCACAAACGCTGTGGAAAGGAAAGGACAGTCGGCCATTTCGCAC
AAGGGAGACCACATCAGCATCCACATAAGCATTCCGCCAAGTTTGAAGGA
TCCTTCCTTTGACGCCCTGGATGATGCATCCATGTATTACTTGAATTATT
GATCGAAACACTTGGTGCCACATTTGGCGGTCGCGAACTATTGTCTGGGG
CGGATATTTCGCCCCAACAAGCTGCACCGCTGCAGATGAGCATCGACAGG
GCTTATATCGGTTGCCCTGAGTACCTTCTATATGCCGTTCGCTTCTTTTC
AAAAGCTAGGGACCGCTTAGCTGATCCGAGGCACCTTGATACGCCTGAGA
CCTATTCTTTCCTCCAGTCAGTCACAAGTATGCTCGATTCTACCATGAGC
TTTGATTGCCACAATTGGGTGACCGAGACCCTGCGAGCCTCATCCACCAC
TTCAACAACGCGAAATATACAGTCTCTCGAACATTTAGCCCAGGCATATA
AATCTGCAACTCTAATCTACGGTTGGCGGGTCTGTGATCGGCTTACTGGA
AATGAAACCCCCTTGGATGACCTGGTAAAAGCGCTGGTCGTAGAGGCTGA
AACACTGAGGAGGGATGAAGCGCTATTCAAATGCATACTATGGCCTCTTT
TTATTGCGGGGCTGGAGTCCCAAGAGCAATCCCAAAAGAGCCACATCAGG
AATTGTCTGGAGAGCTTTTGGTTTGAGACCAAATGCATCAATGTGATAAA
TGCGGTAACAATACTCGAAAGGTTCTGGGTGGACCCATCGAACGTGGAAG
ACGACTCAAGCAGCTGGGTTTTCCGCATGGGCCAGCTAGAAGGCGATTGG
CTATTAATCTAAACAGCAAATGTGTGTGCAAGTTGTTTGTCATGTTCGAC
AGCCAGCGAAACCCTTTGAGACAACTTATTCCGGCAGCGTTGGCTAATCC
AGCCTTGACTGCCTCTGTGATGGCCCTCTCAGCTCGGCACATGGCAAATG
GCCAGCAAATACAATGTCAGGGGCAGGACGAAGACCACGCGACGCGCTTC
AAGGCACATACTGATGGCTTAATGTACAAACAAAAGGCCATATGCGGGCT
GATCCAGGCGCTCAATGATCCAATATCGAGGTCGAGAGATGTCCTTATTC
TGAGCGCGTTTATATTGATTTTCCTCGATCTTTTAGAGTCGGGGCGAGAC
CAGTGGAAATCCCACCTAGGGGGCATCAAAAAACTTGTTAGTGGCATGCA
TACTGCGGAGACTTCTCGGCATTTAGAAGCAACTATTGAAGGCACGCGGG
AATTTATAATGGGGCAGATTTACCTATGTTCAGATCATGCTATACTTGCC
GGCGTAGGCATGTTGAATGCCAAATGACCCATCCGCCTTGTAAGAAGTGT
CAAAAGGCAGGGCTAGAGTGCCTTCAAAAAAGACCCCTCCGTTGGGTCGA
TGGGCCGGCTTTCCGGAATAGAGCGCGAACTTCACAAGCTCACCAAAGAG
ATAAATCCAACACCCTCAACAAAGGTGATTACGGGGAATCTTGTCTCTAT
GAATCTAGGCTGGCAGAATCAACATTGGAGGCCACAAACGCTGTGGAAAG
GAAAGGACAGTCGGCCATTTCGCACAAGGGAGACCACATCAGCATCCACA
TAAGCATTCCGCCAAGTTTGAAGGATCCTTCCTTTGACGCCCTGGATGAT
GCATCCATGTATTACTTGAATTATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:418323..420010 - |
|
