You are here

Home

ATCC10864_003221-T1, ATCC10864_003221-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003221-T1
Unique NameATCC10864_003221-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:431454..433498-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003221-T1 ID=ATCC10864_003221-T1|Name=ATCC10864_003221-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2045bp|location=Sequence derived from alignment at MCQH01000066:431454..433498- (Aspergillus niger ATCC 10864)
ATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGA
TCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCG
CTATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGA
CATCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGG
GCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCC
TGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAG
CGTGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAG
AGACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTG
CACCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGC
ACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTC
GGTGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGC
AGTTCTATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGG
GACGTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCG
AGACGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGG
CAACGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTT
GCTCAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCT
TGGCCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGG
GCCATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTC
GAGATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCA
TGGATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTC
CCTGTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGAC
GATGTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTC
AGGAGGCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCA
ACCTTATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCT
TCTGGGACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCA
AGCCCTTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCC
CTCCTCTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTC
GCTCTGAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGAC
CAGCTTGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTG
GGATGGCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTAC
CGGTGTCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCT
GAGCAGTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGG
GCGGTACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAAT
CACCTTGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCC
TTTGGTGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGA
ATATGCCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACT
TCTGGTGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGA
AGACTTCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTA
GGTATGTTCGATATCCCGGACATCATGTTTTCTTACTAACAATAACAGAA
ACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTAGAT
ACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:431454..433498-

>ATCC10864_003221-T1 ID=ATCC10864_003221-T1|Name=ATCC10864_003221-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3996bp|location=Sequence derived from alignment at MCQH01000066:431454..433498- (Aspergillus niger ATCC 10864)
AAACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTAG
ATACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGAATG
CCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGATCA
GTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCGCTA
TTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGACAT
CGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGGGCT
TTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCCTGC
GCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAGCGT
GGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAGAGA
CTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTGCAC
CACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGCACT
GCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTCGGT
GGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGCAGT
TCTATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGGGAC
GTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCGAGA
CGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGGCAA
CGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTTGCT
CAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCTTGG
CCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGGGCC
ATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTCGAG
ATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCATGG
ATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTCCCT
GTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGACGAT
GTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTCAGG
AGGCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCAACC
TTATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCTTCT
GGGACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCAAGC
CCTTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCCCTC
CTCTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTCGCT
CTGAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGACCAG
CTTGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTGGGA
TGGCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTACCGG
TGTCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCTGAG
CAGTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGGGCG
GTACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAATCAC
CTTGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCCTTT
GGTGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGAATA
TGCCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACTTCT
GGTGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGAAGA
CTTCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTAGAA
ACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTAGAT
ACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGAATGCC
TGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGATCAGT
GTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCGCTATT
TGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGACATCG
GGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGGGCTTT
TCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCCTGCGC
GACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAGCGTGG
GCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAGAGACT
CACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTGCACCA
CGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGCACTGC
CCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTCGGTGG
AATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGCAGTTC
TATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGGGACGT
CCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCGAGACG
CTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGGCAACG
GACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTTGCTCA
ATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCTTGGCC
ATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGGGCCAT
CTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTCGAGAT
GCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCATGGAT
GCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTCCCTGT
GCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGACGATGT
GGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTCAGGAG
GCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCAACCTT
ATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCTTCTGG
GACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCAAGCCC
TTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCCCTCCT
CTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTCGCTCT
GAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGACCAGCT
TGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTGGGATG
GCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTACCGGTG
TCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCTGAGCA
GTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGGGCGGT
ACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAATCACCT
TGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCCTTTGG
TGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGAATATG
CCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACTTCTGG
TGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGAAGACT
TCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003221ATCC10864_003221Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003221-T1ATCC10864_003221-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003221-T1.cdsATCC10864_003221-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003221-T1.exon2ATCC10864_003221-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003221-T1.exon1ATCC10864_003221-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007219
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:431454..433498 -
Powered by Drupal