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ATCC10864_003268-T1, ATCC10864_003268-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003268-T1
Unique NameATCC10864_003268-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:631254..632751-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003268-T1 ID=ATCC10864_003268-T1|Name=ATCC10864_003268-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1498bp|location=Sequence derived from alignment at MCQH01000066:631254..632751- (Aspergillus niger ATCC 10864)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTGTATGTTACACCCATCCTGTGCCTGGCTCCAATTAACGGT
AGACAGCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGGGATC
TGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGCATCA
GTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCTCCGT
CTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACCTCGT
ACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCACACCT
GTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGTCGTC
AAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAGCCGG
TCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCCCGGG
CATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCACACAT
ATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATCCGCC
GAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGCTGTC
GGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCCCAGC
ATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTGCGGT
GGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCGGATT
CGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCGGTCA
GCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCGCTAA
TTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATGGCCG
AATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAACTTCG
AGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACCGGTC
GTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGATCAAC
GCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGATGTA
TTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAACCCG
AGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCGCAAG
CGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCTAA
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Coding sequence (CDS) from alignment at MCQH01000066:631254..632751-

>ATCC10864_003268-T1 ID=ATCC10864_003268-T1|Name=ATCC10864_003268-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2904bp|location=Sequence derived from alignment at MCQH01000066:631254..632751- (Aspergillus niger ATCC 10864)
CATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGGGATCTGGAGA
CACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGCATCAGTCAAC
AGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCTCCGTCTCTAT
ATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACCTCGTACGATG
GCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCACACCTGTGCAC
ACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGTCGTCAAATCC
AGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAGCCGGTCCGAT
TGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCCCGGGCATGAA
TCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCACACATATTGGC
TTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATCCGCCGAGGAG
GCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGCTGTCGGACTT
GTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCCCAGCATTCTC
ACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTGCGGTGGACGT
CCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCGGATTCGGGTC
TGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCGGTCAGCGCGT
GCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCGCTAATTATAC
CTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATGGCCGAATTTC
AATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAACTTCGAGAGGG
GGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACCGGTCGTCAGC
AGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGATCAACGCCCTT
GCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGATGTATTCAGC
CCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAACCCGAGGGTG
AGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCGCAAGCGCAAG
CGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCTAAATGAATGC
GTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGACCTTTCATG
CCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGCCTGGCATT
CGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAGGCTGGAAA
TGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGAAGTATTCG
CTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATGAGGGCCGA
TTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGGGATCTGGA
GACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGCATCAGTCA
ACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCTCCGTCTCT
ATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACCTCGTACGA
TGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCACACCTGTGC
ACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGTCGTCAAAT
CCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAGCCGGTCCG
ATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCCCGGGCATG
AATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCACACATATTG
GCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATCCGCCGAGG
AGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGCTGTCGGAC
TTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCCCAGCATTC
TCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTGCGGTGGAC
GTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCGGATTCGGG
TCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCGGTCAGCGC
GTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCGCTAATTAT
ACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATGGCCGAATT
TCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAACTTCGAGAG
GGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACCGGTCGTCA
GCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGATCAACGCCC
TTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGATGTATTCA
GCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAACCCGAGGG
TGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCGCAAGCGCA
AGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCTAAATGAAT
GCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGACCTTTCA
TGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGCCTGGCA
TTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAGGCTGGA
AATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGAAGTATT
CGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATGAGGGCC
GATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006283transcription-coupled nucleotide-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003268ATCC10864_003268Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003268-T1ATCC10864_003268-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003268-T1.cdsATCC10864_003268-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003268-T1.exon2ATCC10864_003268-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003268-T1.exon1ATCC10864_003268-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR042238
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:631254..632751 -
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