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ATCC10864_003287-T1, ATCC10864_003287-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003287-T1
Unique NameATCC10864_003287-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:687935..688824+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003287-T1 ID=ATCC10864_003287-T1|Name=ATCC10864_003287-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=890bp|location=Sequence derived from alignment at MCQH01000066:687935..688824+ (Aspergillus niger ATCC 10864)
ATGCCCTCAGCGACAGGAACCAAGCGTGTCAGAGTGAGTTCATCCCTCTT
TAAGATCATACACCAGACCGACCGATTAATCCATTACTATACAGGGCGTT
TCTGTCTTCCGGCCATTCGGTATGCCTCTACTTACCATTATTCCCCATAT
TTGAAACTTAATCCGGTCCTAACAACCCACCAGTCTTCGGCAGCGAAGCC
CAACCCTTCGACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACAC
GCACCAGTGGCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCT
ACTGGCTAAAGAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAAC
GTGCGGACGATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGG
TGAATTCGAGATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGA
AGCCGCAGACTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGAC
GCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGA
GGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGG
GTGGTACGGGCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAAT
ACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCC
GGTTAATTCGTCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTG
AAATGGATCGGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAA
CAGGAGAGGGAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCG
TGCGAGTGAGGGCGTGCCGGCTACTACGAAGAAGCGTTAA
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Coding sequence (CDS) from alignment at MCQH01000066:687935..688824+

>ATCC10864_003287-T1 ID=ATCC10864_003287-T1|Name=ATCC10864_003287-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2295bp|location=Sequence derived from alignment at MCQH01000066:687935..688824+ (Aspergillus niger ATCC 10864)
ATGCCCTCAGCGACAGGAACCAAGCGTGTCAGAGGCGTTTCTGTCTTCCG
GCCATTCGTCTTCGGCAGCGAAGCCCAACCCTTCGACCCAGCCAAGAAAC
CCCCCAACGTCCCAGCCGACCACACGCACCAGTGGCGCGTATTCGTCAAA
GGCGTCAACGGCGAAGACATCTCCTACTGGCTAAAGAAAGTGCAATTTAA
GCTCCACGAGACTTACGCACAGAACGTGCGGACGATCGAACAGGCCCCCT
TCGAAGTCACCGAGACCGGATGGGGTGAATTCGAGATTCAAATCAAGCTA
TATTTTGTTCCGGAATCGACCGAGAAGCCGCAGACTCTATGGCATAGTTT
GAAGTTGCACCCCTATGGGCCGGACGCGGAAGCGAAGAAGGAGCGCCGCG
AGCTGGTAATCAGTCAGAACTATGAGGAGGTGGTGTTCAATGAGCCTGTG
GAGCAGTTTTATGAGCTCTTGACGGGTGGTACGGGCGCAGCAGGGCAACC
GCAGAAGGGGAAGGGTGGCAAGAATACCAAGCAGGCGCAGCAGCAGCAGA
AGGGGGTAAGGACGGCTGAGATTCCGGTTAATTCGTCCGCGGACAATCCG
TATAGTCGGACGACGGAGAGTAGTGAAATGGATCGGTTAGGGGAGGCGAA
TAAGACAGTCGAGCAGATGATCAAACAGGAGAGGGAACGATTGATTGAGC
GGGAGAAGAGGTTGGCGGAATTGCGTGCGAGTGAGGGCGTGCCGGCTACT
ACGAAGAAGCGTTAAATGCCCTCAGCGACAGGAACCAAGCGTGTCAGAGG
CGTTTCTGTCTTCCGGCCATTCGTCTTCGGCAGCGAAGCCCAACCCTTCG
ACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACACGCACCAGTGG
CGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCTACTGGCTAAA
GAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAACGTGCGGACGA
TCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGGTGAATTCGAG
ATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGAAGCCGCAGAC
TCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGACGCGGAAGCGA
AGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGAGGAGGTGGTG
TTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGGGTGGTACGGG
CGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAATACCAAGCAGG
CGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCCGGTTAATTCG
TCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTGAAATGGATCG
GTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAACAGGAGAGGG
AACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCGTGCGAGTGAG
GGCGTGCCGGCTACTACGAAGAAGCGTTAAATGCCCTCAGCGACAGGAAC
CAAGCGTGTCAGAGGCGTTTCTGTCTTCCGGCCATTCGTCTTCGGCAGCG
AAGCCCAACCCTTCGACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGAC
CACACGCACCAGTGGCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACAT
CTCCTACTGGCTAAAGAAAGTGCAATTTAAGCTCCACGAGACTTACGCAC
AGAACGTGCGGACGATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGA
TGGGGTGAATTCGAGATTCAAATCAAGCTATATTTTGTTCCGGAATCGAC
CGAGAAGCCGCAGACTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGC
CGGACGCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAAC
TATGAGGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTT
GACGGGTGGTACGGGCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCA
AGAATACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAG
ATTCCGGTTAATTCGTCCGCGGACAATCCGTATAGTCGGACGACGGAGAG
TAGTGAAATGGATCGGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGA
TCAAACAGGAGAGGGAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAA
TTGCGTGCGAGTGAGGGCGTGCCGGCTACTACGAAGAAGCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YAF9ATCC10864_003287Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003287-T1.exon1ATCC10864_003287-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003287-T1.exon2ATCC10864_003287-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003287-T1.exon3ATCC10864_003287-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003287-T1.cdsATCC10864_003287-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003287-T1ATCC10864_003287-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038704
InterProIPR005033
PFAMPF03366
Properties
Property NameValue
NoteBUSCO:EOG09262UTQ
ProductNuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:687935..688824 +
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