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ATCC10864_003303-T1, ATCC10864_003303-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003303-T1
Unique NameATCC10864_003303-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:723989..725519+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003303-T1 ID=ATCC10864_003303-T1|Name=ATCC10864_003303-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1531bp|location=Sequence derived from alignment at MCQH01000066:723989..725519+ (Aspergillus niger ATCC 10864)
ATGGCGGGCCTGTTCAAGAACGTCTTTGGCGGTTCCCAGCCCTCGAACCC
AGCCAAGGTTGACGATGGTGAGTCTCACAACACGCACGCCCCAAACCCCA
GCTTTTACCTCGACCTTTGTACCCCAGGAAAACCAACTCTTCCCCAAACT
CTCTTCAATTGCTCTCTTAACCCTAGCACAACGTAACAAACACTTCACTA
ATCACCGTCTCCAATGCAGACTTCGCCGACTTCGTCGAAGCTCCGGAACC
CTCCCCGGCCTCCCTCGTCGCCGGGTCCTCATCCATCCCAGCCGTGAACA
CCCAAGGCGTCACCCCGGTCCCCTACACCAAATGGTATCGGGTATGGGAG
CGGACCTCGCCACGAGACTTCATGCAAGAAGCGACCGTGATGCCCATCAT
CCTCCTAATCATCCTCTTCCACTTCTGGGGCACGCGCAAGAACCGCCGCA
AGGCGCGCGACTGGGCGCAAGCCCACACCTCCGCCCTGCAAAGCGAGTTC
GCCGTTGTGGGTTTCGACGGCCCCAGCAGCAGCAACAGCGAAGGACAACC
TGCCCCCGAATCCCTCCTCAAGGAACGCTCCGCTCAAGAATTCGCCTCCT
ACGCGACCGGTCGTCAGAACGTGGCATTCGTGGACGTGGCCATCAAGCTC
CCCAAACGGTACAACCCCGTCACTTTCTGGACGGAGACTGTCCTGGGCTT
CTTGTTTGAGAGCTGGACCCCGCCGACGGAAACTTACGAGGCCACGGCGT
ACACCTTCGACGGAAAGGAGAAGGACGTTGTCCCGCTTCCGGCCAATGAT
CGTTCTTCGTTGAAAGTTAACAACTCCACCTATGATGGATTTATCTGGGC
TGTTGTACACAAGAATTACATGCGGAAGTTCCGTCAGGATCGCTATGATG
CGAGCATCACTTTCACCAGGGATAACAACAAGTTGCCTAATTGGGTTACG
GTCATGACCGAGAGTGCGGAGATCACGGATGCTTTGCTCACGAACGAGTT
GGCCCAGGCTATTGAGAAGGCCGGCAATGACTTCAAGTACTTGATTGTTA
CTGACCAGCCCGTTGAAAAGCCTATGAAGTGAGTTTCCCCCTTCCTAAAC
AGTTTCATCTATCCCCCAAACCGAGCACGCGTGCTAATTAACACCATGTG
ACCAGAATCGAGGAAACCACCCCCCGCAAGCGCATCGAACTGTCCGTCAC
TCTCCCCAGCAACGCAGAAGGCTACACCACCACCCTGCCTCTATTCACGC
AATTCCTCCGCTTCGCCGACCGCCTCGTTGGCGCCGCCCACTTCCGGCCT
GAAGTGATGCGCAAGGTGCGGGGCACTCGCGAGGAAGAGATCAAGAAGCT
GCGTCGTGCGGATGAGGAGGAGAAGGCCGAGGAGCGCAGACTTGCCGCCG
AGAAGGTCAAGAAGGAAGACAGGGAACGTCTCCTGCGTGGTATGTCTGCG
GAGGAGCAGAAGAAGTACCTGGAGCGTGAGCAGCAGAAGGAGCACCGCCG
GATGATGAAGAAGAGTACCCGTCGGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000066:723989..725519+

>ATCC10864_003303-T1 ID=ATCC10864_003303-T1|Name=ATCC10864_003303-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3906bp|location=Sequence derived from alignment at MCQH01000066:723989..725519+ (Aspergillus niger ATCC 10864)
ATGGCGGGCCTGTTCAAGAACGTCTTTGGCGGTTCCCAGCCCTCGAACCC
AGCCAAGGTTGACGATGACTTCGCCGACTTCGTCGAAGCTCCGGAACCCT
CCCCGGCCTCCCTCGTCGCCGGGTCCTCATCCATCCCAGCCGTGAACACC
CAAGGCGTCACCCCGGTCCCCTACACCAAATGGTATCGGGTATGGGAGCG
GACCTCGCCACGAGACTTCATGCAAGAAGCGACCGTGATGCCCATCATCC
TCCTAATCATCCTCTTCCACTTCTGGGGCACGCGCAAGAACCGCCGCAAG
GCGCGCGACTGGGCGCAAGCCCACACCTCCGCCCTGCAAAGCGAGTTCGC
CGTTGTGGGTTTCGACGGCCCCAGCAGCAGCAACAGCGAAGGACAACCTG
CCCCCGAATCCCTCCTCAAGGAACGCTCCGCTCAAGAATTCGCCTCCTAC
GCGACCGGTCGTCAGAACGTGGCATTCGTGGACGTGGCCATCAAGCTCCC
CAAACGGTACAACCCCGTCACTTTCTGGACGGAGACTGTCCTGGGCTTCT
TGTTTGAGAGCTGGACCCCGCCGACGGAAACTTACGAGGCCACGGCGTAC
ACCTTCGACGGAAAGGAGAAGGACGTTGTCCCGCTTCCGGCCAATGATCG
TTCTTCGTTGAAAGTTAACAACTCCACCTATGATGGATTTATCTGGGCTG
TTGTACACAAGAATTACATGCGGAAGTTCCGTCAGGATCGCTATGATGCG
AGCATCACTTTCACCAGGGATAACAACAAGTTGCCTAATTGGGTTACGGT
CATGACCGAGAGTGCGGAGATCACGGATGCTTTGCTCACGAACGAGTTGG
CCCAGGCTATTGAGAAGGCCGGCAATGACTTCAAGTACTTGATTGTTACT
GACCAGCCCGTTGAAAAGCCTATGAAAATCGAGGAAACCACCCCCCGCAA
GCGCATCGAACTGTCCGTCACTCTCCCCAGCAACGCAGAAGGCTACACCA
CCACCCTGCCTCTATTCACGCAATTCCTCCGCTTCGCCGACCGCCTCGTT
GGCGCCGCCCACTTCCGGCCTGAAGTGATGCGCAAGGTGCGGGGCACTCG
CGAGGAAGAGATCAAGAAGCTGCGTCGTGCGGATGAGGAGGAGAAGGCCG
AGGAGCGCAGACTTGCCGCCGAGAAGGTCAAGAAGGAAGACAGGGAACGT
CTCCTGCGTGGTATGTCTGCGGAGGAGCAGAAGAAGTACCTGGAGCGTGA
GCAGCAGAAGGAGCACCGCCGGATGATGAAGAAGAGTACCCGTCGGGCGT
GAATGGCGGGCCTGTTCAAGAACGTCTTTGGCGGTTCCCAGCCCTCGAAC
CCAGCCAAGGTTGACGATGACTTCGCCGACTTCGTCGAAGCTCCGGAACC
CTCCCCGGCCTCCCTCGTCGCCGGGTCCTCATCCATCCCAGCCGTGAACA
CCCAAGGCGTCACCCCGGTCCCCTACACCAAATGGTATCGGGTATGGGAG
CGGACCTCGCCACGAGACTTCATGCAAGAAGCGACCGTGATGCCCATCAT
CCTCCTAATCATCCTCTTCCACTTCTGGGGCACGCGCAAGAACCGCCGCA
AGGCGCGCGACTGGGCGCAAGCCCACACCTCCGCCCTGCAAAGCGAGTTC
GCCGTTGTGGGTTTCGACGGCCCCAGCAGCAGCAACAGCGAAGGACAACC
TGCCCCCGAATCCCTCCTCAAGGAACGCTCCGCTCAAGAATTCGCCTCCT
ACGCGACCGGTCGTCAGAACGTGGCATTCGTGGACGTGGCCATCAAGCTC
CCCAAACGGTACAACCCCGTCACTTTCTGGACGGAGACTGTCCTGGGCTT
CTTGTTTGAGAGCTGGACCCCGCCGACGGAAACTTACGAGGCCACGGCGT
ACACCTTCGACGGAAAGGAGAAGGACGTTGTCCCGCTTCCGGCCAATGAT
CGTTCTTCGTTGAAAGTTAACAACTCCACCTATGATGGATTTATCTGGGC
TGTTGTACACAAGAATTACATGCGGAAGTTCCGTCAGGATCGCTATGATG
CGAGCATCACTTTCACCAGGGATAACAACAAGTTGCCTAATTGGGTTACG
GTCATGACCGAGAGTGCGGAGATCACGGATGCTTTGCTCACGAACGAGTT
GGCCCAGGCTATTGAGAAGGCCGGCAATGACTTCAAGTACTTGATTGTTA
CTGACCAGCCCGTTGAAAAGCCTATGAAAATCGAGGAAACCACCCCCCGC
AAGCGCATCGAACTGTCCGTCACTCTCCCCAGCAACGCAGAAGGCTACAC
CACCACCCTGCCTCTATTCACGCAATTCCTCCGCTTCGCCGACCGCCTCG
TTGGCGCCGCCCACTTCCGGCCTGAAGTGATGCGCAAGGTGCGGGGCACT
CGCGAGGAAGAGATCAAGAAGCTGCGTCGTGCGGATGAGGAGGAGAAGGC
CGAGGAGCGCAGACTTGCCGCCGAGAAGGTCAAGAAGGAAGACAGGGAAC
GTCTCCTGCGTGGTATGTCTGCGGAGGAGCAGAAGAAGTACCTGGAGCGT
GAGCAGCAGAAGGAGCACCGCCGGATGATGAAGAAGAGTACCCGTCGGGC
GTGAATGGCGGGCCTGTTCAAGAACGTCTTTGGCGGTTCCCAGCCCTCGA
ACCCAGCCAAGGTTGACGATGACTTCGCCGACTTCGTCGAAGCTCCGGAA
CCCTCCCCGGCCTCCCTCGTCGCCGGGTCCTCATCCATCCCAGCCGTGAA
CACCCAAGGCGTCACCCCGGTCCCCTACACCAAATGGTATCGGGTATGGG
AGCGGACCTCGCCACGAGACTTCATGCAAGAAGCGACCGTGATGCCCATC
ATCCTCCTAATCATCCTCTTCCACTTCTGGGGCACGCGCAAGAACCGCCG
CAAGGCGCGCGACTGGGCGCAAGCCCACACCTCCGCCCTGCAAAGCGAGT
TCGCCGTTGTGGGTTTCGACGGCCCCAGCAGCAGCAACAGCGAAGGACAA
CCTGCCCCCGAATCCCTCCTCAAGGAACGCTCCGCTCAAGAATTCGCCTC
CTACGCGACCGGTCGTCAGAACGTGGCATTCGTGGACGTGGCCATCAAGC
TCCCCAAACGGTACAACCCCGTCACTTTCTGGACGGAGACTGTCCTGGGC
TTCTTGTTTGAGAGCTGGACCCCGCCGACGGAAACTTACGAGGCCACGGC
GTACACCTTCGACGGAAAGGAGAAGGACGTTGTCCCGCTTCCGGCCAATG
ATCGTTCTTCGTTGAAAGTTAACAACTCCACCTATGATGGATTTATCTGG
GCTGTTGTACACAAGAATTACATGCGGAAGTTCCGTCAGGATCGCTATGA
TGCGAGCATCACTTTCACCAGGGATAACAACAAGTTGCCTAATTGGGTTA
CGGTCATGACCGAGAGTGCGGAGATCACGGATGCTTTGCTCACGAACGAG
TTGGCCCAGGCTATTGAGAAGGCCGGCAATGACTTCAAGTACTTGATTGT
TACTGACCAGCCCGTTGAAAAGCCTATGAAAATCGAGGAAACCACCCCCC
GCAAGCGCATCGAACTGTCCGTCACTCTCCCCAGCAACGCAGAAGGCTAC
ACCACCACCCTGCCTCTATTCACGCAATTCCTCCGCTTCGCCGACCGCCT
CGTTGGCGCCGCCCACTTCCGGCCTGAAGTGATGCGCAAGGTGCGGGGCA
CTCGCGAGGAAGAGATCAAGAAGCTGCGTCGTGCGGATGAGGAGGAGAAG
GCCGAGGAGCGCAGACTTGCCGCCGAGAAGGTCAAGAAGGAAGACAGGGA
ACGTCTCCTGCGTGGTATGTCTGCGGAGGAGCAGAAGAAGTACCTGGAGC
GTGAGCAGCAGAAGGAGCACCGCCGGATGATGAAGAAGAGTACCCGTCGG
GCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0036503ERAD pathway
GO:0032469endoplasmic reticulum calcium ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003303ATCC10864_003303Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003303-T1.exon1ATCC10864_003303-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003303-T1.exon2ATCC10864_003303-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003303-T1.exon3ATCC10864_003303-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003303-T1.cdsATCC10864_003303-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003303-T1ATCC10864_003303-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07946
InterProIPR012879
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:723989..725519 +
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