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ATCC10864_003307-T1, ATCC10864_003307-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003307-T1
Unique NameATCC10864_003307-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:733110..734066-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003307-T1 ID=ATCC10864_003307-T1|Name=ATCC10864_003307-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=957bp|location=Sequence derived from alignment at MCQH01000066:733110..734066- (Aspergillus niger ATCC 10864)
ATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGTGAGCAGCC
CGCATCATTCCCGCCAACACTACACAACACTAACCCCGGTGTCTAGGCCA
GACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAG
CTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCC
CAAGATCATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAGG
TGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTG
GATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGGTATGAGAT
ATGCTGGGTCTATTATCGGGGAGTACTCTAAAATAACCACCAATTCACAG
CAAGTTGCCCCTGGCGGCACAATCACTGGGTCGGGTGCCCCCTTTCCACC
TACTGGGTATTCCAACTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGC
CCGTTAGGTAGGTCTCGTCATATATCAGCAGCCAGGCAATCCGTTCCTTG
ACTGTGTGTCATGTCGCTTGTAGGGGGTCCATGTGCTAATGGAGATGTCT
TGCAGGGAATGGCGTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGA
GATCTCGGAGGAGAAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATA
TTGATGACTTTTATGTCTCATACAACAACAAGACGGACAAGCTTCGTGCC
CAAACCCGCGCTGAGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTC
TTCTGGAGGTACTAGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCG
GAAAGGGAACCAAGGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGA
GAGCTGCTCCTTGATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGG
CGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000066:733110..734066-

>ATCC10864_003307-T1 ID=ATCC10864_003307-T1|Name=ATCC10864_003307-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2976bp|location=Sequence derived from alignment at MCQH01000066:733110..734066- (Aspergillus niger ATCC 10864)
GGAATGGCGTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGAGATCT
CGGAGGAGAAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATATTGAT
GACTTTTATGTCTCATACAACAACAAGACGGACAAGCTTCGTGCCCAAAC
CCGCGCTGAGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTG
GAGGTACTAGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAG
GGAACCAAGGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCT
GCTCCTTGATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTT
AACAAGTTGCCCCTGGCGGCACAATCACTGGGTCGGGTGCCCCCTTTCCA
CCTACTGGGTATTCCAACTACACAACTCAAGCCCCGGAGGAGGAGCCAGA
GCCCGTTAGGCCAGACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAA
AGTGACTTCCTAGCTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACA
ATTTGCGACTCCCCAAGATCATGTCGCCGACGACGTAAACAATGACGACG
ACTTACTGGGAGGTGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCT
CAGGAGATCGCTGGATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAA
CGAGATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGGAATG
GCGTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGG
AGAAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTT
TATGTCTCATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGC
TGAGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTA
CTAGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACC
AAGGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCT
TGATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAACAAG
TTGCCCCTGGCGGCACAATCACTGGGTCGGGTGCCCCCTTTCCACCTACT
GGGTATTCCAACTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGT
TAGGCCAGACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGAC
TTCCTAGCTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACAATTTGC
GACTCCCCAAGATCATGTCGCCGACGACGTAAACAATGACGACGACTTAC
TGGGAGGTGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAG
ATCGCTGGATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGAT
GGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGGAATGGCGTGA
GCGGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGA
AGGAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTC
TCATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGC
AGATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCT
GGGAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGT
GGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCT
TAAGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAACAAGTTGCCC
CTGGCGGCACAATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTAT
TCCAACTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGCC
AGACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTA
GCTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCC
CCAAGATCATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAG
GTGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCT
GGATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGATGGCGGA
TCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGGAATGGCGTGAGCGGCG
AGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAGGAAT
CTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTCATAC
AACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAGATCA
GTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGGGAAC
GCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGGTGCC
AGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTAAGAA
GGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAACAAGTTGCCCCTGGCG
GCACAATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAAC
TACACAACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGCCAGACCG
AAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGC
GAACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGA
TCATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAGGTGCGG
ATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTC
GAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGATGGCGGATCGTTT
CCCTTCATTGGAGGACTTCTCTGCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030132clathrin coat of coated pit
GO:0030130clathrin coat of trans-Golgi network vesicle
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003307ATCC10864_003307Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003307-T1ATCC10864_003307-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003307-T1.cdsATCC10864_003307-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003307-T1.exon4ATCC10864_003307-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003307-T1.exon3ATCC10864_003307-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003307-T1.exon2ATCC10864_003307-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003307-T1.exon1ATCC10864_003307-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000996
PFAMPF01086
Properties
Property NameValue
NoteBUSCO:EOG09264XOC
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:733110..734066 -
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