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ATCC10864_003399-T1, ATCC10864_003399-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003399-T1
Unique NameATCC10864_003399-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1048723..1050498+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003399-T1 ID=ATCC10864_003399-T1|Name=ATCC10864_003399-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1776bp|location=Sequence derived from alignment at MCQH01000066:1048723..1050498+ (Aspergillus niger ATCC 10864)
ATGCTCAAATCTACGTATACCCCACCCCCTCCGTTACCTCCAGGGTGGAC
CGAACATAAAGCTCCTTCAGGTTTGGTTACCAGCTTCCCCGATATCCTCT
TAAAGTCGCTCTAATTAGACCCAGGTCATCTGTATTACTACAACTCGCAG
ACCAAGCAATCCACATATACAAGGCCTCAGGCCACTCCCGTACAACCTCC
GCCTGCACCTGCACCAGAACCCACGAATAACGCGCCATTCCTAACCCCAG
ATACACTTCCTCCCTTTTCTTCGACTCCTTATGCTCCTCATGGTTTTGGG
CATAGCGCTGCATCTCACGGGCCACCTTTCGATGGTCAGTCACGCGGAGG
CTTTCGCGGGGGCAGAGGATACCATGACCGCAAACCCCGTGGGCCACAGG
ATAGGCCTAAAACCAAACATGATATTCCTGGATGCGCGCCATGGATACTC
GTGAAGACGAAGCTGGGAAGGAGATTTGTTCACAACCCCGAAACGAACGA
AAGTTTTTGGAAGATCCCTCCAGAGGTACTGGTAGGAGTCCTTGAGTACG
ATCGCTTGGAGAGAGAGGCGAAGGAAAGGAAGGAGCGGGGCGAGGAGACG
GAAGATGTCGCCAAAGGAAAACCCGAAGCTCAGGAGTCGGATCAACCACG
GCGGGAAGAAGCAGAGAGTGGTGCCGCTACGGCAGCTGGGGAGGAGAGCG
ATGAGTATGAGGAGGTCGAAGTTACTGATAGCGAGGGTGAGGAAGAGCAA
CCTTTCAAACGACCGAGAACCGAAGAAGGGGACGAACAGCAGCCGATGGA
GTTCACTGAAGAAGATATGGAATATCAATTAGCGGCAATGGGCGAAGAAT
ATGGCCTTGACCCTGGCGAATACGGCGAACCCGGAGAAGAAGAATGGGAA
GAGGGCGCAGAAGGGCTTCCGCTCACGGAGGAGGATGCCACAGCCTTATT
CCGTGATCTTCTTGACGACTATCGCATTAACCCGTTCTCCACGTGGGAAA
AGATCATCGAAGAAGGTCGGATCATTGACGATAGCCGCTACACTGTGCTG
CCAAACATGAAAACGCGTCGTGAGGTCTGGTCCAACTGGAGTCGTGACCG
GATTCAAGAACTTAAAGAACGCAAAGAGAAGGAAGAAAAGAAGGACCCGC
GCATCAAGTACTTGGCCTTCCTCCAGGAACACGCCACACCAAAGTTGTAT
TGGCCCGAGTTCAAGCGCAAATACAAAAAGGAACCAGAAATGAAGGATAC
GCAATTGTCAGACAAAGATCGAGAAAAGTACTACCGCGACTTGATTTCTC
GATTGAAACAGTCAGAAAGCACGCGAAAGTCTGACCTTTCAGCGCTACTA
AAATCTGTACCACTGCACGAACTCAATCGGTCGTCTAATCTGGAGGCTCT
TCCTCCTTCCATCATCACCGATCTCAGATACATCGCCCTTATGCCCAAAG
TGCGGAATCCGCTTATCGAGGCTTACATCTCTACCTTGCCTGCTGCTCCG
GAAAGCGACATGACCGCCGAGGAAAGAGAAGAGCTAGAACGGAAGAAGGT
TGAACGTGATCGACGCGAAAAGGCGTTGGCAGAACGAGAGAAGCAGGTAC
AAGAGGAGAAGAGAAAGCAAAAAGGCGAGCTTGTTCGCGGTAAACACCTT
TTGAGAGAAGGGGAAGCGGAGATCGAGGAAGCTATGAGGATCAATAGAGG
AGGACTTCGCAGCTACATTGAAGCCGAAGATCAATCTTCAAAGGGCCAAG
GCGAGAACGCCAGTCAGCAGCCATGA
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Coding sequence (CDS) from alignment at MCQH01000066:1048723..1050498+

>ATCC10864_003399-T1 ID=ATCC10864_003399-T1|Name=ATCC10864_003399-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3444bp|location=Sequence derived from alignment at MCQH01000066:1048723..1050498+ (Aspergillus niger ATCC 10864)
ATGCTCAAATCTACGTATACCCCACCCCCTCCGTTACCTCCAGGGTGGAC
CGAACATAAAGCTCCTTCAGGTCATCTGTATTACTACAACTCGCAGACCA
AGCAATCCACATATACAAGGCCTCAGGCCACTCCCGTACAACCTCCGCCT
GCACCTGCACCAGAACCCACGAATAACGCGCCATTCCTAACCCCAGATAC
ACTTCCTCCCTTTTCTTCGACTCCTTATGCTCCTCATGGTTTTGGGCATA
GCGCTGCATCTCACGGGCCACCTTTCGATGGTCAGTCACGCGGAGGCTTT
CGCGGGGGCAGAGGATACCATGACCGCAAACCCCGTGGGCCACAGGATAG
GCCTAAAACCAAACATGATATTCCTGGATGCGCGCCATGGATACTCGTGA
AGACGAAGCTGGGAAGGAGATTTGTTCACAACCCCGAAACGAACGAAAGT
TTTTGGAAGATCCCTCCAGAGGTACTGGTAGGAGTCCTTGAGTACGATCG
CTTGGAGAGAGAGGCGAAGGAAAGGAAGGAGCGGGGCGAGGAGACGGAAG
ATGTCGCCAAAGGAAAACCCGAAGCTCAGGAGTCGGATCAACCACGGCGG
GAAGAAGCAGAGAGTGGTGCCGCTACGGCAGCTGGGGAGGAGAGCGATGA
GTATGAGGAGGTCGAAGTTACTGATAGCGAGGGTGAGGAAGAGCAACCTT
TCAAACGACCGAGAACCGAAGAAGGGGACGAACAGCAGCCGATGGAGTTC
ACTGAAGAAGATATGGAATATCAATTAGCGGCAATGGGCGAAGAATATGG
CCTTGACCCTGGCGAATACGGCGAACCCGGAGAAGAAGAATGGGAAGAGG
GCGCAGAAGGGCTTCCGCTCACGGAGGAGGATGCCACAGCCTTATTCCGT
GATCTTCTTGACGACTATCGCATTAACCCGTTCTCCACGTGGGAAAAGAT
CATCGAAGAAGGTCGGATCATTGACGATAGCCGCTACACTGTGCTGCCAA
ACATGAAAACGCGTCGTGAGGTCTGGTCCAACTGGAGTCGTGACCGGATT
CAAGAACTTAAAGAACGCAAAGAGAAGGAAGAAAAGAAGGACCCGCGCAT
CAAGTACTTGGCCTTCCTCCAGGAACACGCCACACCAAAGTTGTATTGGC
CCGAGTTCAAGCGCAAATACAAAAAGGAACCAGAAATGAAGGATACGCAA
TTGTCAGACAAAGATCGAGAAAAGTACTACCGCGACTTGATTTCTCGATT
GAAACAGTCAGAAAGCACGCGAAAGTCTGACCTTTCAGCGCTACTAAAAT
CTGTACCACTGCACGAACTCAATCGGTCGTCTAATCTGGAGGCTCTTCCT
CCTTCCATCATCACCGATCTCAGATACATCGCCCTTATGCCCAAAGTGCG
GAATCCGCTTATCGAGGCTTACATCTCTACCTTGCCTGCTGCTCCGGAAA
GCGACATGACCGCCGAGGAAAGAGAAGAGCTAGAACGGAAGAAGGTTGAA
CGTGATCGACGCGAAAAGGCGTTGGCAGAACGAGAGAAGCAGGTACAAGA
GGAGAAGAGAAAGCAAAAAGGCGAGCTTGTTCGCGGTAAACACCTTTTGA
GAGAAGGGGAAGCGGAGATCGAGGAAGCTATGAGGATCAATAGAGGAGGA
CTTCGCAGCTACATTGAAGCCGAAGATCAATCTTCAAAGGGCCAAGGCGA
GAACGCCAGTCAGCAGCCATGAATGCTCAAATCTACGTATACCCCACCCC
CTCCGTTACCTCCAGGGTGGACCGAACATAAAGCTCCTTCAGGTCATCTG
TATTACTACAACTCGCAGACCAAGCAATCCACATATACAAGGCCTCAGGC
CACTCCCGTACAACCTCCGCCTGCACCTGCACCAGAACCCACGAATAACG
CGCCATTCCTAACCCCAGATACACTTCCTCCCTTTTCTTCGACTCCTTAT
GCTCCTCATGGTTTTGGGCATAGCGCTGCATCTCACGGGCCACCTTTCGA
TGGTCAGTCACGCGGAGGCTTTCGCGGGGGCAGAGGATACCATGACCGCA
AACCCCGTGGGCCACAGGATAGGCCTAAAACCAAACATGATATTCCTGGA
TGCGCGCCATGGATACTCGTGAAGACGAAGCTGGGAAGGAGATTTGTTCA
CAACCCCGAAACGAACGAAAGTTTTTGGAAGATCCCTCCAGAGGTACTGG
TAGGAGTCCTTGAGTACGATCGCTTGGAGAGAGAGGCGAAGGAAAGGAAG
GAGCGGGGCGAGGAGACGGAAGATGTCGCCAAAGGAAAACCCGAAGCTCA
GGAGTCGGATCAACCACGGCGGGAAGAAGCAGAGAGTGGTGCCGCTACGG
CAGCTGGGGAGGAGAGCGATGAGTATGAGGAGGTCGAAGTTACTGATAGC
GAGGGTGAGGAAGAGCAACCTTTCAAACGACCGAGAACCGAAGAAGGGGA
CGAACAGCAGCCGATGGAGTTCACTGAAGAAGATATGGAATATCAATTAG
CGGCAATGGGCGAAGAATATGGCCTTGACCCTGGCGAATACGGCGAACCC
GGAGAAGAAGAATGGGAAGAGGGCGCAGAAGGGCTTCCGCTCACGGAGGA
GGATGCCACAGCCTTATTCCGTGATCTTCTTGACGACTATCGCATTAACC
CGTTCTCCACGTGGGAAAAGATCATCGAAGAAGGTCGGATCATTGACGAT
AGCCGCTACACTGTGCTGCCAAACATGAAAACGCGTCGTGAGGTCTGGTC
CAACTGGAGTCGTGACCGGATTCAAGAACTTAAAGAACGCAAAGAGAAGG
AAGAAAAGAAGGACCCGCGCATCAAGTACTTGGCCTTCCTCCAGGAACAC
GCCACACCAAAGTTGTATTGGCCCGAGTTCAAGCGCAAATACAAAAAGGA
ACCAGAAATGAAGGATACGCAATTGTCAGACAAAGATCGAGAAAAGTACT
ACCGCGACTTGATTTCTCGATTGAAACAGTCAGAAAGCACGCGAAAGTCT
GACCTTTCAGCGCTACTAAAATCTGTACCACTGCACGAACTCAATCGGTC
GTCTAATCTGGAGGCTCTTCCTCCTTCCATCATCACCGATCTCAGATACA
TCGCCCTTATGCCCAAAGTGCGGAATCCGCTTATCGAGGCTTACATCTCT
ACCTTGCCTGCTGCTCCGGAAAGCGACATGACCGCCGAGGAAAGAGAAGA
GCTAGAACGGAAGAAGGTTGAACGTGATCGACGCGAAAAGGCGTTGGCAG
AACGAGAGAAGCAGGTACAAGAGGAGAAGAGAAAGCAAAAAGGCGAGCTT
GTTCGCGGTAAACACCTTTTGAGAGAAGGGGAAGCGGAGATCGAGGAAGC
TATGAGGATCAATAGAGGAGGACTTCGCAGCTACATTGAAGCCGAAGATC
AATCTTCAAAGGGCCAAGGCGAGAACGCCAGTCAGCAGCCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045292mRNA cis splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003399ATCC10864_003399Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003399-T1.exon1ATCC10864_003399-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003399-T1.exon2ATCC10864_003399-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003399-T1.cdsATCC10864_003399-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003399-T1ATCC10864_003399-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01846
InterProIPR001202
InterProIPR036517
PFAMPF00397
InterProIPR036020
InterProIPR039726
InterProIPR002713
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1048723..1050498 +
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