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ATCC10864_003409-T1, ATCC10864_003409-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003409-T1
Unique NameATCC10864_003409-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1068720..1070109+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003409-T1 ID=ATCC10864_003409-T1|Name=ATCC10864_003409-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1390bp|location=Sequence derived from alignment at MCQH01000066:1068720..1070109+ (Aspergillus niger ATCC 10864)
ATGTTTCACTCATCGGTAAGTCTATTTGGCAACTTCCCGCGGCCTAAACC
AATTGGCATTGAAAGCAGTGTCAATTACACAACACACCACCATCTGCAAA
TTCACGAGAGAAAATGTGGCTCTGCCATCCATTGATTCATGGACTAAAAG
ATGTACTCTCCATAGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGT
CCTCACCAGCGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACC
TTATCGAGGCCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGC
GCTTTGCGTAAGAAGCTGTTCGTGTGTCTAATCCCTCTGATTGAGAGCGC
TCTAACGCCCTCTCAGCAAGTATGGCAATCTTCACCGCCAATTGCGAGCC
CTTACGATCCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGCG
GGAATTTGCAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACCG
ACCCGGTTTCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGGG
CAATGGGCAGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAGG
TCTCTACAGACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAGG
CCAAAGTGTTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCAT
ACGGTGTCCGTATCAGCCGGAAATGGGCCGGCTACAGTTCTCAGTGGCCC
CAAGCACAAGCACACCTCCAGCAAATCATCTCTCTCGTCTTTCAGGAAGG
AGAAGAAGGAGAAGAAGACATTAAGCAGGTCTTTCAGCCTCGATAAAGAG
AAGCCAGAGATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACAAA
CCTCCTCAACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAGCG
AAGATGCCGAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGACGC
CAAATTCTGCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGTAG
TTTGATTCATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGAAG
TCCTGGACAAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCCTA
GAGACGGGGTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCAGG
GTTGGTTGTGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAGCA
TATCCGTACCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAGAA
ACGGAAGACGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCCAT
CCACACCCCTGGCATTGAGAAGCACGAGCCTACCTGGTAG
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Coding sequence (CDS) from alignment at MCQH01000066:1068720..1070109+

>ATCC10864_003409-T1 ID=ATCC10864_003409-T1|Name=ATCC10864_003409-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3573bp|location=Sequence derived from alignment at MCQH01000066:1068720..1070109+ (Aspergillus niger ATCC 10864)
ATGTTTCACTCATCGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGT
CCTCACCAGCGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACC
TTATCGAGGCCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGC
GCTTTGCGTAAGAAGCTCAAGTATGGCAATCTTCACCGCCAATTGCGAGC
CCTTACGATCCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGC
GGGAATTTGCAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACC
GACCCGGTTTCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGG
GCAATGGGCAGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAG
GTCTCTACAGACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAG
GCCAAAGTGTTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCA
TACGGTGTCCGTATCAGCCGGAAATGGGCCGGCTACAGTTCTCAGTGGCC
CCAAGCACAAGCACACCTCCAGCAAATCATCTCTCTCGTCTTTCAGGAAG
GAGAAGAAGGAGAAGAAGACATTAAGCAGGTCTTTCAGCCTCGATAAAGA
GAAGCCAGAGATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACAA
ACCTCCTCAACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAGC
GAAGATGCCGAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGACG
CCAAATTCTGCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGTA
GTTTGATTCATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGAA
GTCCTGGACAAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCCT
AGAGACGGGGTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCAG
GGTTGGTTGTGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAGC
ATATCCGTACCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAGA
AACGGAAGACGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCCA
TCCACACCCCTGGCATTGAGAAGCACGAGCCTACCTGGTAGATGTTTCAC
TCATCGAAGCCGTATTCGGCTGTGACGGTCCAGATCGAGGTCCTCACCAG
CGAACAGTATGAGGTGGAAGATTCAAGTGGAATCGTGGACCTTATCGAGG
CCATTCGTATCCAGGCCAGTGGTCCTACAGAAGCGAGTCGCGCTTTGCGT
AAGAAGCTCAAGTATGGCAATCTTCACCGCCAATTGCGAGCCCTTACGAT
CCTCGATTTCCTGATCCAGAATACCGGCGACCGCTTTCTGCGGGAATTTG
CAGATGAGCCCTTGCTGGAACGACTACGAATCGCCGCGACCGACCCGGTT
TCTGACCCTTTGGTAAAAGAGAAATGCAAACAGCTCTTTGGGCAATGGGC
AGCCTCTTACAAGAACACCCCTGGGATGGAGCGGGTTACAGGTCTCTACA
GACAACTACCGAAGCGTAAGCAGCCGGCTACTCAGGCAAAGGCCAAAGTG
TTGCGGGATGCGGGGCAATCCGAAGAACCTTCGATGGGCCATACGGTGTC
CGTATCAGCCGGAAATGGGCCGGCTACAGTTCTCAGTGGCCCCAAGCACA
AGCACACCTCCAGCAAATCATCTCTCTCGTCTTTCAGGAAGGAGAAGAAG
GAGAAGAAGACATTAAGCAGGTCTTTCAGCCTCGATAAAGAGAAGCCAGA
GATGCTACAGACCCTCGCGTCAGCTTCCGTCGCCAGTACAAACCTCCTCA
ACGCTCTCAAGCTAGTTAACCGCGAAACGCAACGGGTCAGCGAAGATGCC
GAAGTCCTCAACCGGTTTGAGACTTGCAAGACATTACGACGCCAAATTCT
GCGATACATCCAGCACGTGGAGAGTGAGGAGTTTCTGGGTAGTTTGATTC
ATGCAAACGAAGAGCTAGTCACGGCACTTATGGCATTTGAAGTCCTGGAC
AAGAGTGTAGACTACGACAGTGATAGCGACCAGGATGTCCTAGAGACGGG
GTGGACCCCTGACCGCGACGACCTCCCCGACTCATTCGCAGGGTTGGTTG
TGAACCCCCCGAAGCCACCACGTCCCCCTCGTCCCTTGAGCATATCCGTA
CCATCCTCATCAAGGAAAGTCTACAGTGACAGCGAGTCAGAAACGGAAGA
CGATGACGATGAAGATAATCCATTTGGCGACCGCAACGCCATCCACACCC
CTGGCATTGAGAAGCACGAGCCTACCTGGTAGATGTTTCACTCATCGAAG
CCGTATTCGGCTGTGACGGTCCAGATCGAGGTCCTCACCAGCGAACAGTA
TGAGGTGGAAGATTCAAGTGGAATCGTGGACCTTATCGAGGCCATTCGTA
TCCAGGCCAGTGGTCCTACAGAAGCGAGTCGCGCTTTGCGTAAGAAGCTC
AAGTATGGCAATCTTCACCGCCAATTGCGAGCCCTTACGATCCTCGATTT
CCTGATCCAGAATACCGGCGACCGCTTTCTGCGGGAATTTGCAGATGAGC
CCTTGCTGGAACGACTACGAATCGCCGCGACCGACCCGGTTTCTGACCCT
TTGGTAAAAGAGAAATGCAAACAGCTCTTTGGGCAATGGGCAGCCTCTTA
CAAGAACACCCCTGGGATGGAGCGGGTTACAGGTCTCTACAGACAACTAC
CGAAGCGTAAGCAGCCGGCTACTCAGGCAAAGGCCAAAGTGTTGCGGGAT
GCGGGGCAATCCGAAGAACCTTCGATGGGCCATACGGTGTCCGTATCAGC
CGGAAATGGGCCGGCTACAGTTCTCAGTGGCCCCAAGCACAAGCACACCT
CCAGCAAATCATCTCTCTCGTCTTTCAGGAAGGAGAAGAAGGAGAAGAAG
ACATTAAGCAGGTCTTTCAGCCTCGATAAAGAGAAGCCAGAGATGCTACA
GACCCTCGCGTCAGCTTCCGTCGCCAGTACAAACCTCCTCAACGCTCTCA
AGCTAGTTAACCGCGAAACGCAACGGGTCAGCGAAGATGCCGAAGTCCTC
AACCGGTTTGAGACTTGCAAGACATTACGACGCCAAATTCTGCGATACAT
CCAGCACGTGGAGAGTGAGGAGTTTCTGGGTAGTTTGATTCATGCAAACG
AAGAGCTAGTCACGGCACTTATGGCATTTGAAGTCCTGGACAAGAGTGTA
GACTACGACAGTGATAGCGACCAGGATGTCCTAGAGACGGGGTGGACCCC
TGACCGCGACGACCTCCCCGACTCATTCGCAGGGTTGGTTGTGAACCCCC
CGAAGCCACCACGTCCCCCTCGTCCCTTGAGCATATCCGTACCATCCTCA
TCAAGGAAAGTCTACAGTGACAGCGAGTCAGAAACGGAAGACGATGACGA
TGAAGATAATCCATTTGGCGACCGCAACGCCATCCACACCCCTGGCATTG
AGAAGCACGAGCCTACCTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003409ATCC10864_003409Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003409-T1.exon1ATCC10864_003409-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003409-T1.exon2ATCC10864_003409-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003409-T1.exon3ATCC10864_003409-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003409-T1.cdsATCC10864_003409-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003409-T1ATCC10864_003409-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00790
InterProIPR044103
InterProIPR038425
InterProIPR008942
InterProIPR002014
Properties
Property NameValue
NoteBUSCO:EOG09262YQG
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1068720..1070109 +
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