You are here

ATCC10864_003413-T1, ATCC10864_003413-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003413-T1
Unique NameATCC10864_003413-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1078892..1079959-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003413-T1 ID=ATCC10864_003413-T1|Name=ATCC10864_003413-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1068bp|location=Sequence derived from alignment at MCQH01000066:1078892..1079959- (Aspergillus niger ATCC 10864)
ATGTTCGACCTCCCCAGCGCAAAGCGGTACGTCAAATACACCAACCTACT AGCCTCAATTCCAACTTCAATCCCACTAACCCACGCCCCAACCACAGCGT CCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTC CACCCCCAGAATCCTCTCTCACAGACGTCCACCAACGTCTCGGCGCCCTC CTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCTCCGCAACC AACGACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCC GACTGTTCAGCGCCCCCGCAAAATCCGAATCTAAAAAGGAAGAGCAAGCA GCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGGGTACG CTCACCCACGCCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGTGAATC CGTTTCGCGGATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGGCTGGG GTTAAGGAGGATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAGAAGAG GAGACAGTTTGAGGACGCGGCTGTTTCGGGGTTGCAGGTGGTAAGGTTTG CAGGTGTGGAGTGGGTAAGTCTACTTTTTTCTTTACTACCTTGAGCTCTA TTGGAGTGGCTGAGTGGATGTTTTGCTGACACTTTCTGCGCTCTAGCCCG GGTGTCATCTCCCGTGGAGGGTTGTGACGCTGAAGAGTGAGAAGAAGGGT AAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGAC GTCTTTGAAGAAGCCGGGCAAGAAGCGCCGGATTCAGTTGCGGAAGCGGG TCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTTGTTG GAGGCGGAGAAGCGGAATCGGAAGAATCGCGAGAAGAAGATCAAGCGGAG GCAGAAGGCGAGAGAGGAGAAGGCTGCTAAGGCTGCCGCTGCTGCTGCGG CTGGTGGTGGTGAGGCTCCGGCTGGTCAGATGGATGTGGATGTGTCTTCG GATGAGGGCAGCGATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:1078892..1079959-

>ATCC10864_003413-T1 ID=ATCC10864_003413-T1|Name=ATCC10864_003413-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2745bp|location=Sequence derived from alignment at MCQH01000066:1078892..1079959- (Aspergillus niger ATCC 10864)
CCCGGGTGTCATCTCCCGTGGAGGGTTGTGACGCTGAAGAGTGAGAAGAA
GGGTAAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGC
CGACGTCTTTGAAGAAGCCGGGCAAGAAGCGCCGGATTCAGTTGCGGAAG
CGGGTCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTT
GTTGGAGGCGGAGAAGCGGAATCGGAAGAATCGCGAGAAGAAGATCAAGC
GGAGGCAGAAGGCGAGAGAGGAGAAGGCTGCTAAGGCTGCCGCTGCTGCT
GCGGCTGGTGGTGGTGAGGCTCCGGCTGGTCAGATGGATGTGGATGTGTC
TTCGGATGAGGGCAGCGATTGACGTCCGTCGCGAAGAACTCCTATCCCGA
ACATCCACCTCGCCCTCCCCCTCTCCACCCCCAGAATCCTCTCTCACAGA
CGTCCACCAACGTCTCGGCGCCCTCCTAGACATCGACGCCCTCCTCGCGC
CACAACCCGACCCATCTCCGCAACCAACGACCGAAGCCAACCCCGACGAA
GACGAAGAACAAGAGTTCGAATTCCGACTGTTCAGCGCCCCCGCAAAATC
CGAATCTAAAAAGGAAGAGCAAGCAGCTGTCGAGTCCAGCACAACTCAAG
CCCAGAAATTACGCATCCGGGTACGCTCACCCACGCCCGGCGCAGTGGGA
GTGGAAGATGGACGCTTTGTGAATCCGTTTCGCGGATGGGGGTACTATTT
CTCTGCGCCGGGGGCGATGGCTGGGGTTAAGGAGGATGAGTTACGGCTGG
AAGAGGAGAGGTTGAGGGAGAAGAGGAGACAGTTTGAGGACGCGGCTGTT
TCGGGGTTGCAGGTGGTAAGGTTTGCAGGTGTGGAGTGGATGTTCGACCT
CCCCAGCGCAAAGCGCCCGGGTGTCATCTCCCGTGGAGGGTTGTGACGCT
GAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGACGTGCGCGAAGGACC
CTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCGGGCAAGAAGCGCCGG
ATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGAGAGAAAGAAGAAAGA
GGAGGAGAAGAAGTTGTTGGAGGCGGAGAAGCGGAATCGGAAGAATCGCG
AGAAGAAGATCAAGCGGAGGCAGAAGGCGAGAGAGGAGAAGGCTGCTAAG
GCTGCCGCTGCTGCTGCGGCTGGTGGTGGTGAGGCTCCGGCTGGTCAGAT
GGATGTGGATGTGTCTTCGGATGAGGGCAGCGATTGACGTCCGTCGCGAA
GAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTCCACCCCCAGA
ATCCTCTCTCACAGACGTCCACCAACGTCTCGGCGCCCTCCTAGACATCG
ACGCCCTCCTCGCGCCACAACCCGACCCATCTCCGCAACCAACGACCGAA
GCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCCGACTGTTCAG
CGCCCCCGCAAAATCCGAATCTAAAAAGGAAGAGCAAGCAGCTGTCGAGT
CCAGCACAACTCAAGCCCAGAAATTACGCATCCGGGTACGCTCACCCACG
CCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGTGAATCCGTTTCGCGG
ATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGGCTGGGGTTAAGGAGG
ATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAGAAGAGGAGACAGTTT
GAGGACGCGGCTGTTTCGGGGTTGCAGGTGGTAAGGTTTGCAGGTGTGGA
GTGGATGTTCGACCTCCCCAGCGCAAAGCGCCCGGGTGTCATCTCCCGTG
GAGGGTTGTGACGCTGAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGA
CGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCG
GGCAAGAAGCGCCGGATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGA
GAGAAAGAAGAAAGAGGAGGAGAAGAAGTTGTTGGAGGCGGAGAAGCGGA
ATCGGAAGAATCGCGAGAAGAAGATCAAGCGGAGGCAGAAGGCGAGAGAG
GAGAAGGCTGCTAAGGCTGCCGCTGCTGCTGCGGCTGGTGGTGGTGAGGC
TCCGGCTGGTCAGATGGATGTGGATGTGTCTTCGGATGAGGGCAGCGATT
GACGTCCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCC
CTCTCCACCCCCAGAATCCTCTCTCACAGACGTCCACCAACGTCTCGGCG
CCCTCCTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCTCCG
CAACCAACGACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGA
ATTCCGACTGTTCAGCGCCCCCGCAAAATCCGAATCTAAAAAGGAAGAGC
AAGCAGCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGG
GTACGCTCACCCACGCCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGT
GAATCCGTTTCGCGGATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGG
CTGGGGTTAAGGAGGATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAG
AAGAGGAGACAGTTTGAGGACGCGGCTGTTTCGGGGTTGCAGGTGGTAAG
GTTTGCAGGTGTGGAGTGGATGTTCGACCTCCCCAGCGCAAAGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003413ATCC10864_003413Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003413-T1ATCC10864_003413-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003413-T1.cdsATCC10864_003413-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003413-T1.exon3ATCC10864_003413-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003413-T1.exon2ATCC10864_003413-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003413-T1.exon1ATCC10864_003413-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018555
PFAMPF09428
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1078892..1079959 -