|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:1082803..1083919- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003415-T1 ID=ATCC10864_003415-T1|Name=ATCC10864_003415-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1117bp|location=Sequence derived from alignment at MCQH01000066:1082803..1083919- (Aspergillus niger ATCC 10864)
ATGAGTAGCCCGAAGCGGAGAATTGAGACAGATGTGAGTACCCCTCCCCT
CAGTACCCCTCATGCCCTTGCGGCGAAAGTGGTGGCGGAAGGACTAACGC
TTGGGATTTGTCCACATATAGGTCATGAAGTACGCCCTCGTACCGCTGTT
GCCCTCATACCTGATAGCTGACTGACTGATATTCTGGCAGGATGTACGCA
CCCTTCCCCGTATCCGGCACCTATCATACTCCCCCTCAACTTGGGTTGGA
ATGAGCACGCAATTTCGGATATGGGACAGGTCAACAGATTTCAGGGGGAT
TTGTGCTGATGTTTCGCATAGGTTGATGAGTGATTATGAGGTGACTCTGG
TCAATGATAACAGTAAGTGCACTCAGTCTTTTGCCACCGACCATCGGACA
CTGACTTTGATTTGCAGTGTATGCAGACTCTGCTTGCCCTACAATCGTCA
GATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGT
GCGTTTTAAGGGACCTGAAGAGAGTAAGACCCATACAATTTCCGACTATG
GCAAATCAAACCTGCTGACATAGCCAGCACCCTTTGCCGGTGGCCACTGG
AAGATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTAT
CGGATTTGTGAACCGGATTTTCCACCCGAACATCGATGAGCTGTAAGACA
ACTTCGACAAGTCTTGTGTCCAACGGCTAACCCCAGCTGCCCAGGTCGGG
TTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATA
TGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAAC
CCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCC
AAAGAGCTACGAGGCAAAGGTCAAGGGTACGTTGCCACATATGCGACATA
CTTCGTCATCCTTAGCTGACGTGTCACCAGAGTACGTGGCCAAATACGCC
AGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGA
ACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTA
CGATGGACGACGTCTAA back to topCoding sequence (CDS) from alignment at MCQH01000066:1082803..1083919- >ATCC10864_003415-T1 ID=ATCC10864_003415-T1|Name=ATCC10864_003415-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5136bp|location=Sequence derived from alignment at MCQH01000066:1082803..1083919- (Aspergillus niger ATCC 10864)
AGTACGTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAA
GACACAGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGG
CGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTT
TGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAA
CATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGG
ACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGC
TACGAGGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCA
CGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTG
TGAACCGGATTTTCCACCCGAACATCGATGAGCTATGCACGATTGATATT
GACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTG
AAGAGAGTTGATGAGTGATTATGAGGTGACTCTGGTCAATGATAACAGAT
GTACGCACCCTTCCCCGTATCCGGCACCTATCATACTCCCCCTCAACTTG
GGTCATGAAATGAGTAGCCCGAAGCGGAGAATTGAGACAGATAGTACGTG
GCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGA
GTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAG
AGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTTTGGA
TGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCG
AGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTC
AACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGC
AAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCACGTCGAAC
TACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACCGG
ATTTTCCACCCGAACATCGATGAGCTATGCACGATTGATATTGACTGCTC
GCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGT
TGATGAGTGATTATGAGGTGACTCTGGTCAATGATAACAGATGTACGCAC
CCTTCCCCGTATCCGGCACCTATCATACTCCCCCTCAACTTGGGTCATGA
AATGAGTAGCCCGAAGCGGAGAATTGAGACAGATAGTACGTGGCCAAATA
CGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAG
ACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCC
GGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTTTGGATGTCATAA
ATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCGAGGTCTTC
CTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAACGGCGA
AGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAAAGGTCA
AGGCACCCTTTGCCGGTGGCCACTGGAAGATCCACGTCGAACTACCCGAC
CAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACCGGATTTTCCA
CCCGAACATCGATGAGCTATGCACGATTGATATTGACTGCTCGCTTTGTT
AGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGTTGATGAGT
GATTATGAGGTGACTCTGGTCAATGATAACAGATGTACGCACCCTTCCCC
GTATCCGGCACCTATCATACTCCCCCTCAACTTGGGTCATGAAATGAGTA
GCCCGAAGCGGAGAATTGAGACAGATAGTACGTGGCCAAATACGCCAGCA
AAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGAACTG
AGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGAT
GGACGACGTCTAAGTCGGGTTCCGTTTGTTTGGATGTCATAAATCAAACA
TGGTCGCCCATGTACGATATGATCAACATCTTCGAGGTCTTCCTTCCTCA
GCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAACGGCGAAGCAGCTG
CTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAAAGGTCAAGGCACCC
TTTGCCGGTGGCCACTGGAAGATCCACGTCGAACTACCCGACCAGTACCC
ATACAAGAGCCCGAGTATCGGATTTGTGAACCGGATTTTCCACCCGAACA
TCGATGAGCTATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGA
GTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGTTGATGAGTGATTATGA
GGTGACTCTGGTCAATGATAACAGATGTACGCACCCTTCCCCGTATCCGG
CACCTATCATACTCCCCCTCAACTTGGGTCATGAAATGAGTAGCCCGAAG
CGGAGAATTGAGACAGATAGTACGTGGCCAAATACGCCAGCAAAGAGGCT
GTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGAACTGAGCTCGGC
AGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACG
TCTAAGTCGGGTTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGCC
CATGTACGATATGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGC
GCTACCCCAACCCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTC
ATGCGGGAGCCAAAGAGCTACGAGGCAAAGGTCAAGGCACCCTTTGCCGG
TGGCCACTGGAAGATCCACGTCGAACTACCCGACCAGTACCCATACAAGA
GCCCGAGTATCGGATTTGTGAACCGGATTTTCCACCCGAACATCGATGAG
CTATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACG
TGCGTTTTAAGGGACCTGAAGAGAGTTGATGAGTGATTATGAGGTGACTC
TGGTCAATGATAACAGATGTACGCACCCTTCCCCGTATCCGGCACCTATC
ATACTCCCCCTCAACTTGGGTCATGAAATGAGTAGCCCGAAGCGGAGAAT
TGAGACAGATAGTACGTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGA
AGCCGGGGAAGACACAGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTT
ACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTC
GGGTTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACG
ATATGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCC
AACCCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGA
GCCAAAGAGCTACGAGGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACT
GGAAGATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGT
ATCGGATTTGTGAACCGGATTTTCCACCCGAACATCGATGAGCTATGCAC
GATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTT
AAGGGACCTGAAGAGAGTTGATGAGTGATTATGAGGTGACTCTGGTCAAT
GATAACAGATGTACGCACCCTTCCCCGTATCCGGCACCTATCATACTCCC
CCTCAACTTGGGTCATGAAATGAGTAGCCCGAAGCGGAGAATTGAGACAG
ATAGTACGTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGG
AAGACACAGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCC
GGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCG
TTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATC
AACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTC
GGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGA
GCTACGAGGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATC
CACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATT
TGTGAACCGGATTTTCCACCCGAACATCGATGAGCTATGCACGATTGATA
TTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGACC
TGAAGAGAGTTGATGAGTGATTATGAGGTGACTCTGGTCAATGATAACAG
ATGTACGCACCCTTCCCCGTATCCGGCACCTATCATACTCCCCCTCAACT
TGGGTCATGAAATGAGTAGCCCGAAGCGGAGAATTGAGACAGATAGTACG
TGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACA
GAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGA
AGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTTTG
GATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTT
CGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTC
TCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAG
GCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCACGTCGA
ACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACC
GGATTTTCCACCCGAACATCGATGAGCTATGCACGATTGATATTGACTGC
TCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGA
GTTGATGAGTGATTATGAGGTGACTCTGGTCAATGATAACAGATGTACGC
ACCCTTCCCCGTATCCGGCACCTATCATACTCCCCCTCAACTTGGGTCAT
GAAATGAGTAGCCCGAAGCGGAGAATTGAGACAGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000608 |
| InterPro | IPR023313 |
| PFAM | PF00179 |
| InterPro | IPR016135 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264Z1B |
| Product | Ubiquitin-conjugating enzyme E2 8 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:1082803..1083919 - |
|
