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ATCC10864_003417-T1, ATCC10864_003417-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003417-T1
Unique NameATCC10864_003417-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1086513..1087621-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003417-T1 ID=ATCC10864_003417-T1|Name=ATCC10864_003417-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1109bp|location=Sequence derived from alignment at MCQH01000066:1086513..1087621- (Aspergillus niger ATCC 10864)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGCTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCTCCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGGAAGAAGGTAAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGTATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTCATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTTCGTATTCTTACCGTCCTT
CTTGAGTCTGTCGAGATTAACGTGTGATTTTGGCGCAGGTCGCAGATCTC
CCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCAT
CCGCATCGTGAAGGAGGGTCGCGTCCAGGCTATCAAGCTCGAGGGTGGTG
CTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTT
TGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGATT
CAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATG
CCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTG
CCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCGTATCCCCACGAT
TGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTG
ATATGATCGGGAACTACCCCCCCGGCCGGTTCCTTCCCAAATTCGTCAAG
AAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCG
TGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTA
TTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGC
AAGGACTAA
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Coding sequence (CDS) from alignment at MCQH01000066:1086513..1087621-

>ATCC10864_003417-T1 ID=ATCC10864_003417-T1|Name=ATCC10864_003417-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2100bp|location=Sequence derived from alignment at MCQH01000066:1086513..1087621- (Aspergillus niger ATCC 10864)
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTCCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCCGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCTCCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGGAAGAAGGTAACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGTATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTCCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCCGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCTCCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGGAAGAAGGTAACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGTATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003417ATCC10864_003417Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003417-T1ATCC10864_003417-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003417-T1.cdsATCC10864_003417-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003417-T1.exon2ATCC10864_003417-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003417-T1.exon1ATCC10864_003417-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015813
InterProIPR003700
PFAMPF02548
InterProIPR040442
Properties
Property NameValue
NoteBUSCO:EOG09263FTE
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1086513..1087621 -
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