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ATCC10864_003446-T1, ATCC10864_003446-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003446-T1
Unique NameATCC10864_003446-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1161081..1162691+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003446-T1 ID=ATCC10864_003446-T1|Name=ATCC10864_003446-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1611bp|location=Sequence derived from alignment at MCQH01000066:1161081..1162691+ (Aspergillus niger ATCC 10864)
ATGGCTTTTGCAGGTCTCACTGGCTCATCACTATCTAGAGCCCGCATTTG
TCTCATAGTTGCCCCTGCATTCCTCTTGTACGGCTACAACCAATCCAACA
TCGGCGGAGTGCTTGATTATCCATCATTCATCAAGCATTTCCCACCGATA
GATACGAGTTACACCACAGGTTCTGTCAAAAACCACAATGCAACCATTCA
GGGCATGTTCCCAAATCCATAATATATTTGGTATATTCTAATCCTCGGTG
GATGTATAGGAACTGTTGTCGCCATCTACACCATCGGATGCCTCATCGGC
GCCCTCTCAATCACCCAGCTCGGGAACCGGATCGGACGACGGAAATCCCT
CATTGCCGTTGCTGCAGTAGCCACCATCGGTCTGGTCATCCAAGCTACGT
CCTACCACATAGCCCAACTTGTCGTTGGCCGCATCATCTCCGGAATCGGC
ACTGGTGGCGTGAACGCCGTAGTGCCAGTCTGGCAAAGCGAGTGCACGAA
ACCCAAGAGCCGAGGGAAGAATGTCGTGGTCATCGGCGTGTTCATCGCCT
CAGGAGTCGCCATCGCCAGCTGGGTGAACGTTGGTCTCTCTTTCATAGAA
GGGAGTGAGGTATCCTGGCGCCTCCCTCTGGCTCTGCCGATCGTGTTCAC
TCTGCTGCTCTTGGCATTCACCATGTCCTTTCCTGAATTCCCCCGCTGGC
TCATAAGCAAGGGTCTCAAGACAGAAGCCCGCGTTGCTATGCACGCACTA
TCCGACAATCACACGGTCAGCTACGAAGCGATCGACGCAGAAATTGAGAC
CATCTCCCTCGCTCTCCGCGAATCCTCTACATCAGAATACGGCTTCGCCA
ACTTCTTCAAACGGGGACCTCAACGCCTTTTCTACCGTCTATGCCTTGCC
ATCGCCGTCAACTTCAGCGCCCAAATGACGGGAGCCAACGTAATAACCTA
CTACGGAAAAATTATCTTCCAAGAATCCCTCGGCCTCGAAGCAGAGAAAG
CAGCCATCCTCAGCGCCGGTGTCCTAACATGGAAGATCTTCGCCGCTTTC
TCAGCCTATCTATCCGTAGACCGCTTCGGCCGCAAGCCACTCTTCATCAT
CTCCGCGTTAGGAATGGGGACATCCATGGCCGGACTCACTGGGACTGTCT
GGGCTATTGATAATCGTTACACGTATGGCGCGAGTATCGCTGCAACGTTC
TTTCTCTTTTTCTACATGTCTTTCTTCCCGCTTGGATTCTTGGCTGCGAA
TTTCTTGTATGCTGCTGAGATTGCGCCCCAGGAGCTGAGGATTCATTTGG
CTGCGATTGGAACGGCAACGCATTGGCTGTTTAATTTTGTTATCGCGGAA
ATTACACCCGTCGCGTTTGCCACCATTAGGTGGAGATATTATATTGTCTA
TGGGGTGGTTGGGTTTGGCGTTGCTTTTATGGTTTATTTCTTGTTTCCCG
AGACCAAGGGTCGCTCGTTGGAGGAGATGGATCGGCTATTTGAGGATCCG
GGGCGTTGGTGGGAGGTTACTGCATATGCGAGAGGGATGGAAGGAATGGA
TATGGGGCAGGTGGATAGAGAGGATGTGAAGATGAGCACGAGTCATATTG
AGAAGGCTTAG
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Coding sequence (CDS) from alignment at MCQH01000066:1161081..1162691+

>ATCC10864_003446-T1 ID=ATCC10864_003446-T1|Name=ATCC10864_003446-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3042bp|location=Sequence derived from alignment at MCQH01000066:1161081..1162691+ (Aspergillus niger ATCC 10864)
ATGGCTTTTGCAGGTCTCACTGGCTCATCACTATCTAGAGCCCGCATTTG
TCTCATAGTTGCCCCTGCATTCCTCTTGTACGGCTACAACCAATCCAACA
TCGGCGGAGTGCTTGATTATCCATCATTCATCAAGCATTTCCCACCGATA
GATACGAGTTACACCACAGGAACTGTTGTCGCCATCTACACCATCGGATG
CCTCATCGGCGCCCTCTCAATCACCCAGCTCGGGAACCGGATCGGACGAC
GGAAATCCCTCATTGCCGTTGCTGCAGTAGCCACCATCGGTCTGGTCATC
CAAGCTACGTCCTACCACATAGCCCAACTTGTCGTTGGCCGCATCATCTC
CGGAATCGGCACTGGTGGCGTGAACGCCGTAGTGCCAGTCTGGCAAAGCG
AGTGCACGAAACCCAAGAGCCGAGGGAAGAATGTCGTGGTCATCGGCGTG
TTCATCGCCTCAGGAGTCGCCATCGCCAGCTGGGTGAACGTTGGTCTCTC
TTTCATAGAAGGGAGTGAGGTATCCTGGCGCCTCCCTCTGGCTCTGCCGA
TCGTGTTCACTCTGCTGCTCTTGGCATTCACCATGTCCTTTCCTGAATTC
CCCCGCTGGCTCATAAGCAAGGGTCTCAAGACAGAAGCCCGCGTTGCTAT
GCACGCACTATCCGACAATCACACGGTCAGCTACGAAGCGATCGACGCAG
AAATTGAGACCATCTCCCTCGCTCTCCGCGAATCCTCTACATCAGAATAC
GGCTTCGCCAACTTCTTCAAACGGGGACCTCAACGCCTTTTCTACCGTCT
ATGCCTTGCCATCGCCGTCAACTTCAGCGCCCAAATGACGGGAGCCAACG
TAATAACCTACTACGGAAAAATTATCTTCCAAGAATCCCTCGGCCTCGAA
GCAGAGAAAGCAGCCATCCTCAGCGCCGGTGTCCTAACATGGAAGATCTT
CGCCGCTTTCTCAGCCTATCTATCCGTAGACCGCTTCGGCCGCAAGCCAC
TCTTCATCATCTCCGCGTTAGGAATGGGGACATCCATGGCCGGACTCACT
GGGACTGTCTGGGCTATTGATAATCGTTACACGTATGGCGCGAGTATCGC
TGCAACGTTCTTTCTCTTTTTCTACATGTCTTTCTTCCCGCTTGGATTCT
TGGCTGCGAATTTCTTGTATGCTGCTGAGATTGCGCCCCAGGAGCTGAGG
ATTCATTTGGCTGCGATTGGAACGGCAACGCATTGGCTGTTTAATTTTGT
TATCGCGGAAATTACACCCGTCGCGTTTGCCACCATTAGGTGGAGATATT
ATATTGTCTATGGGGTGGTTGGGTTTGGCGTTGCTTTTATGGTTTATTTC
TTGTTTCCCGAGACCAAGGGTCGCTCGTTGGAGGAGATGGATCGGCTATT
TGAGGATCCGGGGCGTTGGTGGGAGGTTACTGCATATGCGAGAGGGATGG
AAGGAATGGATATGGGGCAGGTGGATAGAGAGGATGTGAAGATGAGCACG
AGTCATATTGAGAAGGCTTAGATGGCTTTTGCAGGTCTCACTGGCTCATC
ACTATCTAGAGCCCGCATTTGTCTCATAGTTGCCCCTGCATTCCTCTTGT
ACGGCTACAACCAATCCAACATCGGCGGAGTGCTTGATTATCCATCATTC
ATCAAGCATTTCCCACCGATAGATACGAGTTACACCACAGGAACTGTTGT
CGCCATCTACACCATCGGATGCCTCATCGGCGCCCTCTCAATCACCCAGC
TCGGGAACCGGATCGGACGACGGAAATCCCTCATTGCCGTTGCTGCAGTA
GCCACCATCGGTCTGGTCATCCAAGCTACGTCCTACCACATAGCCCAACT
TGTCGTTGGCCGCATCATCTCCGGAATCGGCACTGGTGGCGTGAACGCCG
TAGTGCCAGTCTGGCAAAGCGAGTGCACGAAACCCAAGAGCCGAGGGAAG
AATGTCGTGGTCATCGGCGTGTTCATCGCCTCAGGAGTCGCCATCGCCAG
CTGGGTGAACGTTGGTCTCTCTTTCATAGAAGGGAGTGAGGTATCCTGGC
GCCTCCCTCTGGCTCTGCCGATCGTGTTCACTCTGCTGCTCTTGGCATTC
ACCATGTCCTTTCCTGAATTCCCCCGCTGGCTCATAAGCAAGGGTCTCAA
GACAGAAGCCCGCGTTGCTATGCACGCACTATCCGACAATCACACGGTCA
GCTACGAAGCGATCGACGCAGAAATTGAGACCATCTCCCTCGCTCTCCGC
GAATCCTCTACATCAGAATACGGCTTCGCCAACTTCTTCAAACGGGGACC
TCAACGCCTTTTCTACCGTCTATGCCTTGCCATCGCCGTCAACTTCAGCG
CCCAAATGACGGGAGCCAACGTAATAACCTACTACGGAAAAATTATCTTC
CAAGAATCCCTCGGCCTCGAAGCAGAGAAAGCAGCCATCCTCAGCGCCGG
TGTCCTAACATGGAAGATCTTCGCCGCTTTCTCAGCCTATCTATCCGTAG
ACCGCTTCGGCCGCAAGCCACTCTTCATCATCTCCGCGTTAGGAATGGGG
ACATCCATGGCCGGACTCACTGGGACTGTCTGGGCTATTGATAATCGTTA
CACGTATGGCGCGAGTATCGCTGCAACGTTCTTTCTCTTTTTCTACATGT
CTTTCTTCCCGCTTGGATTCTTGGCTGCGAATTTCTTGTATGCTGCTGAG
ATTGCGCCCCAGGAGCTGAGGATTCATTTGGCTGCGATTGGAACGGCAAC
GCATTGGCTGTTTAATTTTGTTATCGCGGAAATTACACCCGTCGCGTTTG
CCACCATTAGGTGGAGATATTATATTGTCTATGGGGTGGTTGGGTTTGGC
GTTGCTTTTATGGTTTATTTCTTGTTTCCCGAGACCAAGGGTCGCTCGTT
GGAGGAGATGGATCGGCTATTTGAGGATCCGGGGCGTTGGTGGGAGGTTA
CTGCATATGCGAGAGGGATGGAAGGAATGGATATGGGGCAGGTGGATAGA
GAGGATGTGAAGATGAGCACGAGTCATATTGAGAAGGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003446ATCC10864_003446Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003446-T1.exon1ATCC10864_003446-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003446-T1.exon2ATCC10864_003446-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003446-T1.cdsATCC10864_003446-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003446-T1ATCC10864_003446-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
Properties
Property NameValue
NoteSMCOG1169:sugar transport protein
NoteantiSMASH:Cluster_1000066.6
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1161081..1162691 +
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