You are here

Home

ATCC10864_003450-T1, ATCC10864_003450-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003450-T1
Unique NameATCC10864_003450-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1173372..1174378+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003450-T1 ID=ATCC10864_003450-T1|Name=ATCC10864_003450-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1007bp|location=Sequence derived from alignment at MCQH01000066:1173372..1174378+ (Aspergillus niger ATCC 10864)
ATGGCCTTCCGTATCCCCTTCGCTCAATCGTTCTGGCAGGAATATCTGTC
CGGCCAGGAAGCCAACCTGCCTCGTCTTCCCGAAGTCGAGCAGGTCACCG
AGACGGTGATGCGCATTCTCGGAGGTAATCCCGGGCGCATGCAGCTGCAA
GGGACCAACACGTACCTCGTGGGAACGGGCAAATTCCGAATTCTCATTGA
CACCGGCCAGGTAGTCCACCTTTACCTTCCTACTATAAACATCTAAAGAC
TGACAACCAACAGGGTGAAGCAAGCTGGATCGAAGCCCTCACGGAACAAC
TCGAAGCCAATGGTCTAGAGATCTCCCATGTCTTGCTCACTCACTGGCAC
GGAGACCACACCGGTGGAGTCCCCGACCTCATCACCTACAACCCCGAACT
ATCCTCGCGGGTATACAAAAATACCCCCGATCTCGGCCAACAAGCCATCC
ACGATGGTCAGAAATTCCACGTAGAGGGCGCAACTATCCGTGCTGTCTTC
ACCCCCGGTCACGCCTTTGATCACATGTGCTTCCTGCTGGAGGAAGAAAA
TGCCCTCTTCACTGGGGACAACGTGCTAGGACATGGATACTCTGTCGTGG
AAGATCTGGGCACATATATGACCAGTCTAACACGCATGGCGGACCTCAAC
TGCGCGCTTGGGTATCCAGCTCATGGGACGCGTATCGAGGATCTTCCTGC
CAAGATGAAGGAATATATCCAGCATAAGGAGTCAAGGATGCGGCAGGTGC
TGGCCGCCTTGGAGAGGAGTCGGGCGAGGATGACGGCAACTGGGGGTGGG
CGCCGTGCGGGTGCGCTGACATTCCCGGAGCTTATAAACTCTATGTATGG
AGGGATTCCAGATGAGATTGAACAGGCTTTGACGCCGTTCTTGAGTCAGG
TTTTGTGGAAATTGGCGGAGGATCGGAAGGTTGGGTTTGAGGGCGAGCCG
AGTCAGAGACGCTGGTTTGCGGTTGGGCCGCCAACTGCAACTGCAGTGAG
GCTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000066:1173372..1174378+

>ATCC10864_003450-T1 ID=ATCC10864_003450-T1|Name=ATCC10864_003450-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1908bp|location=Sequence derived from alignment at MCQH01000066:1173372..1174378+ (Aspergillus niger ATCC 10864)
ATGGCCTTCCGTATCCCCTTCGCTCAATCGTTCTGGCAGGAATATCTGTC
CGGCCAGGAAGCCAACCTGCCTCGTCTTCCCGAAGTCGAGCAGGTCACCG
AGACGGTGATGCGCATTCTCGGAGGTAATCCCGGGCGCATGCAGCTGCAA
GGGACCAACACGTACCTCGTGGGAACGGGCAAATTCCGAATTCTCATTGA
CACCGGCCAGGGTGAAGCAAGCTGGATCGAAGCCCTCACGGAACAACTCG
AAGCCAATGGTCTAGAGATCTCCCATGTCTTGCTCACTCACTGGCACGGA
GACCACACCGGTGGAGTCCCCGACCTCATCACCTACAACCCCGAACTATC
CTCGCGGGTATACAAAAATACCCCCGATCTCGGCCAACAAGCCATCCACG
ATGGTCAGAAATTCCACGTAGAGGGCGCAACTATCCGTGCTGTCTTCACC
CCCGGTCACGCCTTTGATCACATGTGCTTCCTGCTGGAGGAAGAAAATGC
CCTCTTCACTGGGGACAACGTGCTAGGACATGGATACTCTGTCGTGGAAG
ATCTGGGCACATATATGACCAGTCTAACACGCATGGCGGACCTCAACTGC
GCGCTTGGGTATCCAGCTCATGGGACGCGTATCGAGGATCTTCCTGCCAA
GATGAAGGAATATATCCAGCATAAGGAGTCAAGGATGCGGCAGGTGCTGG
CCGCCTTGGAGAGGAGTCGGGCGAGGATGACGGCAACTGGGGGTGGGCGC
CGTGCGGGTGCGCTGACATTCCCGGAGCTTATAAACTCTATGTATGGAGG
GATTCCAGATGAGATTGAACAGGCTTTGACGCCGTTCTTGAGTCAGGTTT
TGTGGAAATTGGCGGAGGATCGGAAGGTTGGGTTTGAGGGCGAGCCGAGT
CAGAGACGCTGGTTTGCGGTTGGGCCGCCAACTGCAACTGCAGTGAGGCT
GTAGATGGCCTTCCGTATCCCCTTCGCTCAATCGTTCTGGCAGGAATATC
TGTCCGGCCAGGAAGCCAACCTGCCTCGTCTTCCCGAAGTCGAGCAGGTC
ACCGAGACGGTGATGCGCATTCTCGGAGGTAATCCCGGGCGCATGCAGCT
GCAAGGGACCAACACGTACCTCGTGGGAACGGGCAAATTCCGAATTCTCA
TTGACACCGGCCAGGGTGAAGCAAGCTGGATCGAAGCCCTCACGGAACAA
CTCGAAGCCAATGGTCTAGAGATCTCCCATGTCTTGCTCACTCACTGGCA
CGGAGACCACACCGGTGGAGTCCCCGACCTCATCACCTACAACCCCGAAC
TATCCTCGCGGGTATACAAAAATACCCCCGATCTCGGCCAACAAGCCATC
CACGATGGTCAGAAATTCCACGTAGAGGGCGCAACTATCCGTGCTGTCTT
CACCCCCGGTCACGCCTTTGATCACATGTGCTTCCTGCTGGAGGAAGAAA
ATGCCCTCTTCACTGGGGACAACGTGCTAGGACATGGATACTCTGTCGTG
GAAGATCTGGGCACATATATGACCAGTCTAACACGCATGGCGGACCTCAA
CTGCGCGCTTGGGTATCCAGCTCATGGGACGCGTATCGAGGATCTTCCTG
CCAAGATGAAGGAATATATCCAGCATAAGGAGTCAAGGATGCGGCAGGTG
CTGGCCGCCTTGGAGAGGAGTCGGGCGAGGATGACGGCAACTGGGGGTGG
GCGCCGTGCGGGTGCGCTGACATTCCCGGAGCTTATAAACTCTATGTATG
GAGGGATTCCAGATGAGATTGAACAGGCTTTGACGCCGTTCTTGAGTCAG
GTTTTGTGGAAATTGGCGGAGGATCGGAAGGTTGGGTTTGAGGGCGAGCC
GAGTCAGAGACGCTGGTTTGCGGTTGGGCCGCCAACTGCAACTGCAGTGA
GGCTGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003450ATCC10864_003450Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003450-T1.exon1ATCC10864_003450-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003450-T1.exon2ATCC10864_003450-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003450-T1.cdsATCC10864_003450-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003450-T1ATCC10864_003450-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00753
InterProIPR036388
InterProIPR001279
InterProIPR036866
Properties
Property NameValue
NoteSMCOG1170:metallo-beta-lactamase family protein
NoteantiSMASH:Cluster_1000066.6
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1173372..1174378 +
Powered by Drupal