You are here

Home

ATCC10864_003464-T1, ATCC10864_003464-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003464-T1
Unique NameATCC10864_003464-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1215181..1217901+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003464-T1 ID=ATCC10864_003464-T1|Name=ATCC10864_003464-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2721bp|location=Sequence derived from alignment at MCQH01000066:1215181..1217901+ (Aspergillus niger ATCC 10864)
ATGGAAGATGAGAGCGGCCCAAGGTACTTGAAACGACTCGAGATGGAGGA
AATAGAGCTAGTCCAAAAATTGCAAAATGCTGAGCGAAGGCAAATACCAG
CTAATGAGCTGGACTTCGATAAGTACGAGAGGATTTCGCTCTCCCTTGAC
ATTGACAGGACCGGGTAAGTGCGGCTGCATTGTTTCTCCATTGTTAGGAA
TGCTAACTTTGTTAGAGCTCAGCTGATAATGCGGGAAGCAGTCGGCTATT
TGTATAACTTTTGTTCAAAGCTACATGCCCAGCTGTATGTCAGCAACAAG
CCCCTGTTCACTTACGAGCGCAATAACTACGGCCGATTCAGGGCGGTAGT
TAAGTTGCCAAGCAACCTCGACCCTTCCCTTCAGTCATTTTCTAGCTCAA
GAAGTTGGTCCAGACTCAAGTATGCAAGGGAGGACGCAGCATTACAAGCA
TATAAAGCGCTTTACCAGGCTGGCCTTGTCAACGATTACTTAGTTCCGAC
TCAGGTCTCAGACCATTTGGAAGGGGATATCATATTCCGGTCCCACTACA
GCATTCAGAACCAGCTGGATCCTTGGCAGGATATTGCTCTTTTATGGAAA
CTTGACAGTCAGCTGTATGCTCACAACCTACGAATCATAAGACCAGAAGA
GGACGAAATCCATCTACATATGATTCTTCCAACTCAGCTTGACACAACAA
TTCACATTCCTCTTTTCATTGATTATTGCACGACCTATACTGCCATTCTC
ACGCCGGGGCATCCAATCACTACAGACATTTCACTTTGCCAGCAAGTGAC
AAACCTGATCTTCCAGTCGGTTTACCGAGACCATTGTTCTCGCAGAAATT
TAGACTATGCGTTTCTTCTTGTCCCAGAATTGGAAGAAACGAAGTTGATA
GAGTTCCTCGAGAGGTATTCTGGATCAGTCAGCCTGACTGAGCTTCTGAA
TCAGGAAGCTACGCCGAGTGCGCTTGGACTGCTTCGCAGTCATACGAGAC
CGAGTCGACCACTTTTGGTAGAACCCTGGGTAGCAGGAGAGTGCTTCTTA
CCTGATGAGTTGTCCATTTCGTCATTCGATGCCAAAGTCAAATACATGAC
TAATCGCCGGAACTTTCTCTCTCATGGAAATCTAGCTGCTGGGAAATCAA
CAAACTGTGAGGCCAGGATAGGTCTTGAAGCTAATGTGAAAAGCATGTCT
GTGCGAGATTTCTTTGTTGATAAGCTACCTTCCATGTTTGCCCAGGTCGC
CCTCTTTACACCAAGCATATCCCACGAGGTGGAGGTATATATGATAGCGC
AAATCTTGCGACAGGAATTATCTCTACGATCAGTGACGCCTTGGCAACGA
ATTGATCTATTGGCTATTGCTATCAGGCCTACAAGTATTGAGCATCGAGC
CACCTTTCGCTCATTAGCCTTCATTGGTGATGCATTCATGAAGTATCTCT
TCGCAATGCAATTGTTTTTGCACCATCATTTGTGGCACGAAGGTCTCCTG
TCCTCGTTGAAGCAGAGGAATCTGTCTGATGCGGGTCTTGCACATGCTAT
ACATCAATCTGGCCTTGGAAAATTTCTCATAAGCAAACATCTCAATGGGA
AACGGTGGGTGCCACCACTTGTGTCGGGGATAGAACCCGCCAGTAACGAA
GCCAGGCAGCGATCCATCGGTGCAGCTACGCTGGCAGATATGACGAAAGC
AGTTGTTGGGGCTGCCTTCACAGATGGTGGATTGAACCAAGCTGCTGCAT
GCGCATCAGTTATGTTTCCCAAACTCAAGTCCTGGAATGCATCGTCTCTG
CATGATGGTACTTATTCCAAGACTAGACCGGAAAATGCAGTTGCTTCAAC
AGCAATAGTCGATATGGAAGAACTCCTTGGATACACTTTCACCGACAAAT
CCCTGGCTGTGGAAAGCATGACACATCCATCTTGCACTGGTCTTGTTCAA
ACAACATCATATCGGCGTCTCTCATTTCTCGGAGCCAGCGTGCTAGAATG
GATCGTTGTGAGCTATCTACATCGACATGCACAAGTGATGAATCCACAAA
GGATGCAGTCCTTGAAGTCCGCGTTCACCAACAACACATTTCTGACCTTT
ATAGCGATAACATTCCACCAAGTAAGGGAGCAAAATCATATAGATGTTGA
TGATGAACACAATGTTCATAAAAACGTGACGACATGCTCAATTAGACTCT
GGGATTTTCTTCGCTTGCATAGCGATGCGTTATCCACCGAATTATCTGAC
TTTGTTCAGAAGTCATCTGAGAAGGCGGATGCTATCAAGCATGAACTATG
GGAGCAGCGATTTTACCCGTGGGTGCGGCTGAGAGCACTTGGGGACATGC
GAGTGTTGTCTGATATCATTCAGAGCATTTTTGGTGCTGTCTTTATCGAT
TCTCAAGCAACCCTAGCATCCTGCGATGCCCTGGCAGAGAAACTCGGAAT
CGTGCCGCTTTTGGAGCATTTCATCTCCCATCAAATCACTACAGACCATC
CAAAAGACACACTACAGGCCATCCTTCCAGGGCGCAAAGTTTCTTATCAG
ATCTGTGTTGACAAGGTGCATCCCGGGACACTGCGGTGTTCTGCTCTGGC
TGACTCCTCGGAAATTGCCTCAGTAGAAGGCCAAATGAATGATGAGGTAA
TCAAGATGCAGGCAGCTGAAACGGCTGTTCGTCTGCTGCGCAAGGGGTTT
GCTTTATCCGAGACATCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:1215181..1217901+

>ATCC10864_003464-T1 ID=ATCC10864_003464-T1|Name=ATCC10864_003464-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5340bp|location=Sequence derived from alignment at MCQH01000066:1215181..1217901+ (Aspergillus niger ATCC 10864)
ATGGAAGATGAGAGCGGCCCAAGGTACTTGAAACGACTCGAGATGGAGGA
AATAGAGCTAGTCCAAAAATTGCAAAATGCTGAGCGAAGGCAAATACCAG
CTAATGAGCTGGACTTCGATAAGTACGAGAGGATTTCGCTCTCCCTTGAC
ATTGACAGGACCGGAGCTCAGCTGATAATGCGGGAAGCAGTCGGCTATTT
GTATAACTTTTGTTCAAAGCTACATGCCCAGCTGTATGTCAGCAACAAGC
CCCTGTTCACTTACGAGCGCAATAACTACGGCCGATTCAGGGCGGTAGTT
AAGTTGCCAAGCAACCTCGACCCTTCCCTTCAGTCATTTTCTAGCTCAAG
AAGTTGGTCCAGACTCAAGTATGCAAGGGAGGACGCAGCATTACAAGCAT
ATAAAGCGCTTTACCAGGCTGGCCTTGTCAACGATTACTTAGTTCCGACT
CAGGTCTCAGACCATTTGGAAGGGGATATCATATTCCGGTCCCACTACAG
CATTCAGAACCAGCTGGATCCTTGGCAGGATATTGCTCTTTTATGGAAAC
TTGACAGTCAGCTGTATGCTCACAACCTACGAATCATAAGACCAGAAGAG
GACGAAATCCATCTACATATGATTCTTCCAACTCAGCTTGACACAACAAT
TCACATTCCTCTTTTCATTGATTATTGCACGACCTATACTGCCATTCTCA
CGCCGGGGCATCCAATCACTACAGACATTTCACTTTGCCAGCAAGTGACA
AACCTGATCTTCCAGTCGGTTTACCGAGACCATTGTTCTCGCAGAAATTT
AGACTATGCGTTTCTTCTTGTCCCAGAATTGGAAGAAACGAAGTTGATAG
AGTTCCTCGAGAGGTATTCTGGATCAGTCAGCCTGACTGAGCTTCTGAAT
CAGGAAGCTACGCCGAGTGCGCTTGGACTGCTTCGCAGTCATACGAGACC
GAGTCGACCACTTTTGGTAGAACCCTGGGTAGCAGGAGAGTGCTTCTTAC
CTGATGAGTTGTCCATTTCGTCATTCGATGCCAAAGTCAAATACATGACT
AATCGCCGGAACTTTCTCTCTCATGGAAATCTAGCTGCTGGGAAATCAAC
AAACTGTGAGGCCAGGATAGGTCTTGAAGCTAATGTGAAAAGCATGTCTG
TGCGAGATTTCTTTGTTGATAAGCTACCTTCCATGTTTGCCCAGGTCGCC
CTCTTTACACCAAGCATATCCCACGAGGTGGAGGTATATATGATAGCGCA
AATCTTGCGACAGGAATTATCTCTACGATCAGTGACGCCTTGGCAACGAA
TTGATCTATTGGCTATTGCTATCAGGCCTACAAGTATTGAGCATCGAGCC
ACCTTTCGCTCATTAGCCTTCATTGGTGATGCATTCATGAAGTATCTCTT
CGCAATGCAATTGTTTTTGCACCATCATTTGTGGCACGAAGGTCTCCTGT
CCTCGTTGAAGCAGAGGAATCTGTCTGATGCGGGTCTTGCACATGCTATA
CATCAATCTGGCCTTGGAAAATTTCTCATAAGCAAACATCTCAATGGGAA
ACGGTGGGTGCCACCACTTGTGTCGGGGATAGAACCCGCCAGTAACGAAG
CCAGGCAGCGATCCATCGGTGCAGCTACGCTGGCAGATATGACGAAAGCA
GTTGTTGGGGCTGCCTTCACAGATGGTGGATTGAACCAAGCTGCTGCATG
CGCATCAGTTATGTTTCCCAAACTCAAGTCCTGGAATGCATCGTCTCTGC
ATGATGGTACTTATTCCAAGACTAGACCGGAAAATGCAGTTGCTTCAACA
GCAATAGTCGATATGGAAGAACTCCTTGGATACACTTTCACCGACAAATC
CCTGGCTGTGGAAAGCATGACACATCCATCTTGCACTGGTCTTGTTCAAA
CAACATCATATCGGCGTCTCTCATTTCTCGGAGCCAGCGTGCTAGAATGG
ATCGTTGTGAGCTATCTACATCGACATGCACAAGTGATGAATCCACAAAG
GATGCAGTCCTTGAAGTCCGCGTTCACCAACAACACATTTCTGACCTTTA
TAGCGATAACATTCCACCAAGTAAGGGAGCAAAATCATATAGATGTTGAT
GATGAACACAATGTTCATAAAAACGTGACGACATGCTCAATTAGACTCTG
GGATTTTCTTCGCTTGCATAGCGATGCGTTATCCACCGAATTATCTGACT
TTGTTCAGAAGTCATCTGAGAAGGCGGATGCTATCAAGCATGAACTATGG
GAGCAGCGATTTTACCCGTGGGTGCGGCTGAGAGCACTTGGGGACATGCG
AGTGTTGTCTGATATCATTCAGAGCATTTTTGGTGCTGTCTTTATCGATT
CTCAAGCAACCCTAGCATCCTGCGATGCCCTGGCAGAGAAACTCGGAATC
GTGCCGCTTTTGGAGCATTTCATCTCCCATCAAATCACTACAGACCATCC
AAAAGACACACTACAGGCCATCCTTCCAGGGCGCAAAGTTTCTTATCAGA
TCTGTGTTGACAAGGTGCATCCCGGGACACTGCGGTGTTCTGCTCTGGCT
GACTCCTCGGAAATTGCCTCAGTAGAAGGCCAAATGAATGATGAGGTAAT
CAAGATGCAGGCAGCTGAAACGGCTGTTCGTCTGCTGCGCAAGGGGTTTG
CTTTATCCGAGACATCGTGAATGGAAGATGAGAGCGGCCCAAGGTACTTG
AAACGACTCGAGATGGAGGAAATAGAGCTAGTCCAAAAATTGCAAAATGC
TGAGCGAAGGCAAATACCAGCTAATGAGCTGGACTTCGATAAGTACGAGA
GGATTTCGCTCTCCCTTGACATTGACAGGACCGGAGCTCAGCTGATAATG
CGGGAAGCAGTCGGCTATTTGTATAACTTTTGTTCAAAGCTACATGCCCA
GCTGTATGTCAGCAACAAGCCCCTGTTCACTTACGAGCGCAATAACTACG
GCCGATTCAGGGCGGTAGTTAAGTTGCCAAGCAACCTCGACCCTTCCCTT
CAGTCATTTTCTAGCTCAAGAAGTTGGTCCAGACTCAAGTATGCAAGGGA
GGACGCAGCATTACAAGCATATAAAGCGCTTTACCAGGCTGGCCTTGTCA
ACGATTACTTAGTTCCGACTCAGGTCTCAGACCATTTGGAAGGGGATATC
ATATTCCGGTCCCACTACAGCATTCAGAACCAGCTGGATCCTTGGCAGGA
TATTGCTCTTTTATGGAAACTTGACAGTCAGCTGTATGCTCACAACCTAC
GAATCATAAGACCAGAAGAGGACGAAATCCATCTACATATGATTCTTCCA
ACTCAGCTTGACACAACAATTCACATTCCTCTTTTCATTGATTATTGCAC
GACCTATACTGCCATTCTCACGCCGGGGCATCCAATCACTACAGACATTT
CACTTTGCCAGCAAGTGACAAACCTGATCTTCCAGTCGGTTTACCGAGAC
CATTGTTCTCGCAGAAATTTAGACTATGCGTTTCTTCTTGTCCCAGAATT
GGAAGAAACGAAGTTGATAGAGTTCCTCGAGAGGTATTCTGGATCAGTCA
GCCTGACTGAGCTTCTGAATCAGGAAGCTACGCCGAGTGCGCTTGGACTG
CTTCGCAGTCATACGAGACCGAGTCGACCACTTTTGGTAGAACCCTGGGT
AGCAGGAGAGTGCTTCTTACCTGATGAGTTGTCCATTTCGTCATTCGATG
CCAAAGTCAAATACATGACTAATCGCCGGAACTTTCTCTCTCATGGAAAT
CTAGCTGCTGGGAAATCAACAAACTGTGAGGCCAGGATAGGTCTTGAAGC
TAATGTGAAAAGCATGTCTGTGCGAGATTTCTTTGTTGATAAGCTACCTT
CCATGTTTGCCCAGGTCGCCCTCTTTACACCAAGCATATCCCACGAGGTG
GAGGTATATATGATAGCGCAAATCTTGCGACAGGAATTATCTCTACGATC
AGTGACGCCTTGGCAACGAATTGATCTATTGGCTATTGCTATCAGGCCTA
CAAGTATTGAGCATCGAGCCACCTTTCGCTCATTAGCCTTCATTGGTGAT
GCATTCATGAAGTATCTCTTCGCAATGCAATTGTTTTTGCACCATCATTT
GTGGCACGAAGGTCTCCTGTCCTCGTTGAAGCAGAGGAATCTGTCTGATG
CGGGTCTTGCACATGCTATACATCAATCTGGCCTTGGAAAATTTCTCATA
AGCAAACATCTCAATGGGAAACGGTGGGTGCCACCACTTGTGTCGGGGAT
AGAACCCGCCAGTAACGAAGCCAGGCAGCGATCCATCGGTGCAGCTACGC
TGGCAGATATGACGAAAGCAGTTGTTGGGGCTGCCTTCACAGATGGTGGA
TTGAACCAAGCTGCTGCATGCGCATCAGTTATGTTTCCCAAACTCAAGTC
CTGGAATGCATCGTCTCTGCATGATGGTACTTATTCCAAGACTAGACCGG
AAAATGCAGTTGCTTCAACAGCAATAGTCGATATGGAAGAACTCCTTGGA
TACACTTTCACCGACAAATCCCTGGCTGTGGAAAGCATGACACATCCATC
TTGCACTGGTCTTGTTCAAACAACATCATATCGGCGTCTCTCATTTCTCG
GAGCCAGCGTGCTAGAATGGATCGTTGTGAGCTATCTACATCGACATGCA
CAAGTGATGAATCCACAAAGGATGCAGTCCTTGAAGTCCGCGTTCACCAA
CAACACATTTCTGACCTTTATAGCGATAACATTCCACCAAGTAAGGGAGC
AAAATCATATAGATGTTGATGATGAACACAATGTTCATAAAAACGTGACG
ACATGCTCAATTAGACTCTGGGATTTTCTTCGCTTGCATAGCGATGCGTT
ATCCACCGAATTATCTGACTTTGTTCAGAAGTCATCTGAGAAGGCGGATG
CTATCAAGCATGAACTATGGGAGCAGCGATTTTACCCGTGGGTGCGGCTG
AGAGCACTTGGGGACATGCGAGTGTTGTCTGATATCATTCAGAGCATTTT
TGGTGCTGTCTTTATCGATTCTCAAGCAACCCTAGCATCCTGCGATGCCC
TGGCAGAGAAACTCGGAATCGTGCCGCTTTTGGAGCATTTCATCTCCCAT
CAAATCACTACAGACCATCCAAAAGACACACTACAGGCCATCCTTCCAGG
GCGCAAAGTTTCTTATCAGATCTGTGTTGACAAGGTGCATCCCGGGACAC
TGCGGTGTTCTGCTCTGGCTGACTCCTCGGAAATTGCCTCAGTAGAAGGC
CAAATGAATGATGAGGTAATCAAGATGCAGGCAGCTGAAACGGCTGTTCG
TCTGCTGCGCAAGGGGTTTGCTTTATCCGAGACATCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016891endoribonuclease activity, producing 5'-phosphomonoesters
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DCL22ATCC10864_003464Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003464-T1.exon1ATCC10864_003464-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003464-T1.exon2ATCC10864_003464-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003464-T1.cdsATCC10864_003464-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003464-T1ATCC10864_003464-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000999
InterProIPR005034
InterProIPR036389
InterProIPR038248
PFAMPF03368
PFAMPF00636
Properties
Property NameValue
ProductDicer-like protein 2-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1215181..1217901 +
Powered by Drupal