You are here

ATCC10864_003483-T1, ATCC10864_003483-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003483-T1
Unique NameATCC10864_003483-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1271999..1274092+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003483-T1 ID=ATCC10864_003483-T1|Name=ATCC10864_003483-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2094bp|location=Sequence derived from alignment at MCQH01000066:1271999..1274092+ (Aspergillus niger ATCC 10864)
ATGAACATGTCCGAATTAAAGAGAGAACTCTGCAGACTCTGCAAAAGGGG AACTAAAACACTCTTTGCTGCCGTCCGCGAAGGGCACAAGGAGTGCGTCC AGATAATCCTGGAAGACCCTGGGATGTTCCCAGTGTTTGAGGCCACGAAG GCCCTCGGATATGCCGTGCGATATAACCAGCTTGAAATTGCTTGGCTCGT GCTTGAGGCTGGGGCCTACCCAAGCCCTGAATTGGATGGCGACACATGGG ATACCTCACCCCTCCATCATGCAACTATCAAAAGCAACTTGGAGATGGTG AAGCTCCTACTCGAGTTCAAAGCTGACGTTGACCAGTCGGACCTGGTCAC CCGCATGATACCCCTGTCTACTGCTACAGCACTGGGCCACACCGAAATCG TCCGCTGCTTGCTGGAATCCGAAGCTGATGTCAACCTGGAGAACAGGTAT GGCGAGGCACCTCTCCATATTGCCACTCGGCTTGGGCACCTGGAAATTAC CCAGCTCCTTCTCGCTCGAGGGGCTGACGTGGACAAACTTGTTGCAGGTA AAAATCCTCTGTACTTCGCGTGCAAACGTGACCATGTCAACATGGTCCGG GTCCTCTTGGCCAACACTCCGAAGCCAAACCTGAACCTGGGAAGTGGGCG GGAGCAACCGTTGTCAATAGCAATCTACCACGGCTACACCGAGATCGTCG CCCTGCTGTTGGAGGCCGGCGTGGACGTCAACCGCATGTGCGGGGAGACC TATACCCCGCTCGAATGGGCCGTAAAGCATAACTGTGAAGCCGCCGTACC AATGATCCTGGAGTACCAGGCGAAGATAGACTGGAAAAGCAGTCGGGGGA GTGGTGTCCTGCGTTTAATCAACCAGAGAACGGAAGTGGCCACAGTCAAG CATCTAATCCGCTGTGGCGTCGATCCAGAAGACGCCAACAAGAAAGGGGA GTGCGCGATCTGGGTCGCCGTGCGGATCAACAATGAGCCTGTTGCCCAGT ATCTCGCGTCAGTTGTGAAGGTAAAACTGAATTATGCCGTGGGACAAGGC GCAGTTTTGCATATTGCATGTCGTTATGACAGCCTGAACATGGTGCGCAT CCTGGCCGAGGCTGGAGCGGACGTCAATCTCGCGGCCCCGGGGGGTGGCG AGACTCCGTTGCAGGCGGCCTGCAACCGTGAAGTCGACGGCTCCAAGTTG AACGACACTTTGGAGATTATCCGGTATTTAATTCAGAAAGGGGCCCGCGT CAACGACAGTGGCGGGAACTTCCGGTCGGCCTTGCACAAGGCGTGTCTGA GTAGCGCGCCGGAAGTCATAAAGCTTCTCTTGGATGCAGGAGCTGATACT AACTGCAAGGACCCGGTTGGGAGGATTCCTGCTCACCTCGTGTGTTATCG GGGACTGGAGCACTACCGGGCATTAAGCCCGAGTAAGGATGCCTTGGTCG CTCGAGACTTGATGCATCGCACGGCATTGCACTATGCCGTGATTAGTGGG GATGTGGACCTGGTGGAAGAGGTCCTGGAGAGCCACAAACAGCATCCTGA TTACCAGGACACGTATATGGAGTTGGTTGATAAGGATGGATGGACGCCGT TGCATTGGGCAGCAAGATGTGTCTCTCCCTTGGATGATAATAGGAAAGAT ATGGTTCCTATGATTGAGTACATGGTGGAGCAAGGCTACGATCTCGCCGC TAAAGGGAAAGCAAGGGAAACGGAGTGGACGCCACTAGAAGTCGCGATAT ATCACGACGCTGATGAGATAGTCAAAGAACTCATCGTGCCGGATAACCTC GAACTGAACCAGCTGCTACCTGGCGCCGAATTTGAGGGTCACTTCTGTGA CGGTTGCTTTCTGCCTCTCGTCGGCTTCAACGTGTATTGCCAGGTATGTG ATAGCTTCTGGCTCTGCTTCAAGTGTCAAGCCTACAGGGAGCTATTTCAT TCCCCGGAACATGAATTGAAGCAGTTCTGTGACGAGTACGGATGGCGTGC GAAGGAATGGGTGCCAAGGGAACGATATGTTCGTCCCGAAAGCCCTATTT TGCTTTCGGATCCACCGGCGGTTGCTTTCCCACCTAGAAGCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:1271999..1274092+

>ATCC10864_003483-T1 ID=ATCC10864_003483-T1|Name=ATCC10864_003483-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2094bp|location=Sequence derived from alignment at MCQH01000066:1271999..1274092+ (Aspergillus niger ATCC 10864)
ATGAACATGTCCGAATTAAAGAGAGAACTCTGCAGACTCTGCAAAAGGGG
AACTAAAACACTCTTTGCTGCCGTCCGCGAAGGGCACAAGGAGTGCGTCC
AGATAATCCTGGAAGACCCTGGGATGTTCCCAGTGTTTGAGGCCACGAAG
GCCCTCGGATATGCCGTGCGATATAACCAGCTTGAAATTGCTTGGCTCGT
GCTTGAGGCTGGGGCCTACCCAAGCCCTGAATTGGATGGCGACACATGGG
ATACCTCACCCCTCCATCATGCAACTATCAAAAGCAACTTGGAGATGGTG
AAGCTCCTACTCGAGTTCAAAGCTGACGTTGACCAGTCGGACCTGGTCAC
CCGCATGATACCCCTGTCTACTGCTACAGCACTGGGCCACACCGAAATCG
TCCGCTGCTTGCTGGAATCCGAAGCTGATGTCAACCTGGAGAACAGGTAT
GGCGAGGCACCTCTCCATATTGCCACTCGGCTTGGGCACCTGGAAATTAC
CCAGCTCCTTCTCGCTCGAGGGGCTGACGTGGACAAACTTGTTGCAGGTA
AAAATCCTCTGTACTTCGCGTGCAAACGTGACCATGTCAACATGGTCCGG
GTCCTCTTGGCCAACACTCCGAAGCCAAACCTGAACCTGGGAAGTGGGCG
GGAGCAACCGTTGTCAATAGCAATCTACCACGGCTACACCGAGATCGTCG
CCCTGCTGTTGGAGGCCGGCGTGGACGTCAACCGCATGTGCGGGGAGACC
TATACCCCGCTCGAATGGGCCGTAAAGCATAACTGTGAAGCCGCCGTACC
AATGATCCTGGAGTACCAGGCGAAGATAGACTGGAAAAGCAGTCGGGGGA
GTGGTGTCCTGCGTTTAATCAACCAGAGAACGGAAGTGGCCACAGTCAAG
CATCTAATCCGCTGTGGCGTCGATCCAGAAGACGCCAACAAGAAAGGGGA
GTGCGCGATCTGGGTCGCCGTGCGGATCAACAATGAGCCTGTTGCCCAGT
ATCTCGCGTCAGTTGTGAAGGTAAAACTGAATTATGCCGTGGGACAAGGC
GCAGTTTTGCATATTGCATGTCGTTATGACAGCCTGAACATGGTGCGCAT
CCTGGCCGAGGCTGGAGCGGACGTCAATCTCGCGGCCCCGGGGGGTGGCG
AGACTCCGTTGCAGGCGGCCTGCAACCGTGAAGTCGACGGCTCCAAGTTG
AACGACACTTTGGAGATTATCCGGTATTTAATTCAGAAAGGGGCCCGCGT
CAACGACAGTGGCGGGAACTTCCGGTCGGCCTTGCACAAGGCGTGTCTGA
GTAGCGCGCCGGAAGTCATAAAGCTTCTCTTGGATGCAGGAGCTGATACT
AACTGCAAGGACCCGGTTGGGAGGATTCCTGCTCACCTCGTGTGTTATCG
GGGACTGGAGCACTACCGGGCATTAAGCCCGAGTAAGGATGCCTTGGTCG
CTCGAGACTTGATGCATCGCACGGCATTGCACTATGCCGTGATTAGTGGG
GATGTGGACCTGGTGGAAGAGGTCCTGGAGAGCCACAAACAGCATCCTGA
TTACCAGGACACGTATATGGAGTTGGTTGATAAGGATGGATGGACGCCGT
TGCATTGGGCAGCAAGATGTGTCTCTCCCTTGGATGATAATAGGAAAGAT
ATGGTTCCTATGATTGAGTACATGGTGGAGCAAGGCTACGATCTCGCCGC
TAAAGGGAAAGCAAGGGAAACGGAGTGGACGCCACTAGAAGTCGCGATAT
ATCACGACGCTGATGAGATAGTCAAAGAACTCATCGTGCCGGATAACCTC
GAACTGAACCAGCTGCTACCTGGCGCCGAATTTGAGGGTCACTTCTGTGA
CGGTTGCTTTCTGCCTCTCGTCGGCTTCAACGTGTATTGCCAGGTATGTG
ATAGCTTCTGGCTCTGCTTCAAGTGTCAAGCCTACAGGGAGCTATTTCAT
TCCCCGGAACATGAATTGAAGCAGTTCTGTGACGAGTACGGATGGCGTGC
GAAGGAATGGGTGCCAAGGGAACGATATGTTCGTCCCGAAAGCCCTATTT
TGCTTTCGGATCCACCGGCGGTTGCTTTCCCACCTAGAAGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003483ATCC10864_003483Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003483-T1.exon1ATCC10864_003483-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003483-T1.cdsATCC10864_003483-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003483-T1ATCC10864_003483-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
InterProIPR002110
InterProIPR000433
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1271999..1274092 +