You are here

Home

ATCC10864_003557-T1, ATCC10864_003557-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003557-T1
Unique NameATCC10864_003557-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000067:59868..60937+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003557-T1 ID=ATCC10864_003557-T1|Name=ATCC10864_003557-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1070bp|location=Sequence derived from alignment at MCQH01000067:59868..60937+ (Aspergillus niger ATCC 10864)
ATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGG
AGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAA
CAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAG
TATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAA
GAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACA
TGATTCAAGAAGTCAGTGGCCGGTCATCCTTAGAGCTCCTCTGCAGTTCG
TCATGCATGCTAACTATTATGATAGAATGGGCCAGAAAGACTAGACTTCA
AACGCCGTCTATTCGCGCACTTGGACGCAAAGACCCCTTCCCATATCCTC
ATCGCATCCTCCTCCTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATG
CACAAATAACCCATCTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCC
ACTTAGTACCTCTGGTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGAC
TATGTGGCGGCTGCATACCAATTCTACAAGGGTCTAGACAAGGATCCGGT
GATTGTGAATCAAGAAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCG
CAATGTGTGCCGAGGCATACAGCCTCGTTACACGAAGGATTGTCTCTGCA
GAAGACCTGGGTGAGCATTAATCTTCCTCCTGTTGCAATATGGAAGAACT
TCTAATGGCGTATAGACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGG
GCGCTGACAGGGCCAATTATGACGAATACCCTCGGCGGCGGGGGAGACTT
CACCCATTTTATGGATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACG
ATATGGAACAGAATAAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGC
TTGAAGAAGAACGTCAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGT
TGAGGGGGATCGTGATGTGCTGTTGACTGAATTGGTGAAGCGTAAACTGG
ACCAAACGGAGAATCAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000067:59868..60937+

>ATCC10864_003557-T1 ID=ATCC10864_003557-T1|Name=ATCC10864_003557-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2853bp|location=Sequence derived from alignment at MCQH01000067:59868..60937+ (Aspergillus niger ATCC 10864)
ATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGG
AGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAA
CAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAG
TATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAA
GAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACA
TGATTCAAGAAAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTC
GCGCACTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTC
CTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCAT
CTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTG
GTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGC
ATACCAATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAG
AAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAG
GCATACAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGACAA
AACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCCAATTA
TGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGGATCAT
TTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAATAAATT
TGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGTCAATG
GGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTGATGTG
CTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAATCAATA
GATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCG
GAGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTA
ACAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGA
GTATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGA
AGAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGAC
ATGATTCAAGAAAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATT
CGCGCACTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCT
CCTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCA
TCTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCT
GGTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTG
CATACCAATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAA
GAAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGA
GGCATACAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGACA
AAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCCAATT
ATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGGATCA
TTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAATAAAT
TTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGTCAAT
GGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTGATGT
GCTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAATCAAT
AGATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATC
GGAGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGT
AACAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGG
AGTATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTG
AAGAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGA
CATGATTCAAGAAAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTAT
TCGCGCACTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCC
TCCTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCC
ATCTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTC
TGGTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCT
GCATACCAATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCA
AGAAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCG
AGGCATACAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGAC
AAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCCAAT
TATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGGATC
ATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAATAAA
TTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGTCAA
TGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTGATG
TGCTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAATCAA
TAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:0016491oxidoreductase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003557ATCC10864_003557Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003557-T1.exon1ATCC10864_003557-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003557-T1.exon2ATCC10864_003557-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003557-T1.exon3ATCC10864_003557-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003557-T1.cdsATCC10864_003557-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003557-T1ATCC10864_003557-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008927
InterProIPR013328
PFAMPF02737
InterProIPR006108
InterProIPR036291
PFAMPF00725
InterProIPR006176
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000067supercontigMCQH01000067:59868..60937 +
Powered by Drupal