You are here

ATCC10864_003563-T1, ATCC10864_003563-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003563-T1
Unique NameATCC10864_003563-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000067:81078..82021-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003563-T1 ID=ATCC10864_003563-T1|Name=ATCC10864_003563-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=944bp|location=Sequence derived from alignment at MCQH01000067:81078..82021- (Aspergillus niger ATCC 10864)
ATGAACGTACAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGTGA CATTTATCAAGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGCAA GAGAGCTATGCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTGAC TCGGCGCAATCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATTAT CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCTGA TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCAGA TTCAAATCCAAGAATGCACTCGCCCTTCTTATTGAGAAGGGATGGGATAT CAACGAGCCAATGTGCGAGACCCAACCCCCCGTCCTAGGGTGAGACAATA CTCCAATCCTTCGCGAGATAACATTTTACTAATCCCTCTCAGCATTGCCA TAGAGGACGAAGAGATGACAACTTGGTTTTTGGATCATGGAGCCGATCCT AATAGACGTACATTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGAAAG ATCACCCGTTTCCATTATCCGCCTCATGCTGGATTATTGCCCAAATATTC ATCCAGGCCAGCTGCTTCATCATGCGGTCCAACGCGAATCTGACACTATC GAAGTACTGGAAATGTTGATTCAGAAGGGAGCGCCTCTTAACACTTCCGT GCACGAAGACCTTCCTACCTTATCGATACTTTGCTTTATGCCTCTAGGAA CTGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTAT CTCCTCAGCAAAGGAGCCGACCATAGTGTCAGAGATAGTAATGGACTTAC AGCTATTGAACTGGCTGCTAGATTGAACCAGCAAGAAGTGGTTGAAGTGC TGCAGAAACATAGAAACGTCGGAAATCCCGTTGACCACCCCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000067:81078..82021-

>ATCC10864_003563-T1 ID=ATCC10864_003563-T1|Name=ATCC10864_003563-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1782bp|location=Sequence derived from alignment at MCQH01000067:81078..82021- (Aspergillus niger ATCC 10864)
CATTGCCATAGAGGACGAAGAGATGACAACTTGGTTTTTGGATCATGGAG
CCGATCCTAATAGACGTACATTCATAGACCTTACCCCGCTTTCGTGGGCT
GTTGAAAGATCACCCGTTTCCATTATCCGCCTCATGCTGGATTATTGCCC
AAATATTCATCCAGGCCAGCTGCTTCATCATGCGGTCCAACGCGAATCTG
ACACTATCGAAGTACTGGAAATGTTGATTCAGAAGGGAGCGCCTCTTAAC
ACTTCCGTGCACGAAGACCTTCCTACCTTATCGATACTTTGCTTTATGCC
TCTAGGAACTGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGG
TTCGCTATCTCCTCAGCAAAGGAGCCGACCATAGTGTCAGAGATAGTAAT
GGACTTACAGCTATTGAACTGGCTGCTAGATTGAACCAGCAAGAAGTGGT
TGAAGTGCTGCAGAAACATAGAAACGTCGGAAATCCCGTTGACCACCCCT
GAATGAACGTACAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGT
GACATTTATCAAGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGC
AAGAGAGCTATGCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTG
ACTCGGCGCAATCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATT
ATCATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCT
GATGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCA
GATTCAAATCCAAGAATGCACTCGCCCTTCTTATTGAGAAGGGATGGGAT
ATCAACGAGCCAATGTGCGAGACCCAACCCCCCGTCCTAGGCATTGCCAT
AGAGGACGAAGAGATGACAACTTGGTTTTTGGATCATGGAGCCGATCCTA
ATAGACGTACATTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGAAAGA
TCACCCGTTTCCATTATCCGCCTCATGCTGGATTATTGCCCAAATATTCA
TCCAGGCCAGCTGCTTCATCATGCGGTCCAACGCGAATCTGACACTATCG
AAGTACTGGAAATGTTGATTCAGAAGGGAGCGCCTCTTAACACTTCCGTG
CACGAAGACCTTCCTACCTTATCGATACTTTGCTTTATGCCTCTAGGAAC
TGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATC
TCCTCAGCAAAGGAGCCGACCATAGTGTCAGAGATAGTAATGGACTTACA
GCTATTGAACTGGCTGCTAGATTGAACCAGCAAGAAGTGGTTGAAGTGCT
GCAGAAACATAGAAACGTCGGAAATCCCGTTGACCACCCCTGAATGAACG
TACAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGTGACATTTAT
CAAGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGCAAGAGAGCT
ATGCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTGACTCGGCGC
AATCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATTATCATGGGG
CAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCTGATGGATCG
TGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCAGATTCAAAT
CCAAGAATGCACTCGCCCTTCTTATTGAGAAGGGATGGGATATCAACGAG
CCAATGTGCGAGACCCAACCCCCCGTCCTAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003563ATCC10864_003563Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003563-T1ATCC10864_003563-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003563-T1.cdsATCC10864_003563-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003563-T1.exon2ATCC10864_003563-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003563-T1.exon1ATCC10864_003563-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000067supercontigMCQH01000067:81078..82021 -