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ATCC10864_003570-T1, ATCC10864_003570-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003570-T1
Unique NameATCC10864_003570-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000067:109063..109893-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003570-T1 ID=ATCC10864_003570-T1|Name=ATCC10864_003570-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=831bp|location=Sequence derived from alignment at MCQH01000067:109063..109893- (Aspergillus niger ATCC 10864)
ATGCCGTCCGCTATTCGCCTGGCAGCTCTTTCACCCATCTTCGCGGCGTT
GATTGCTCCTGTCGTTGGTCAATCAATTGCTCCGCAGGTCAAATCACCTG
AGTTCTTCCAATACATTCGGAGTCTGGGCAATGTCACTGAAAGCCACAGC
CCTGGAGATCTCAAGCGGTCTACCACGTATACTACCAGTACATCGGGTGT
GGATTCTGCTGGTTACTATTACTCCCTGTACAATGACAACGGCGCCGACG
CTGAGTATACCGAGGATTCCTCTTCGGGCAAGTTCTCCCTTAGCTGGGAG
TTGTCAACTGATACGGAATTCCTCGGTGGCAAGGGATACAAAGATACGAG
TACTCGGTGAGTTCGTATTGCTTTCAGTCTCTTGAGTCTACATCGTCACA
AGCACACAAAAACTAATGTCTTCATTCTCATCAGTTCTCTGACCTGGTCA
GGCGATTTTACTGCCGATGGAGACTATACACTCGCTATCTACGGCTGGAC
CCTGGATCCGGTGACTGAGTGGTATATAGTCGAGTCCTATGGCACAGGCA
CCCCGGGCAATGGGGACATCCTCGGTCAAGTAGAGAGTGATGGGGGTGTG
TATGATGTCTATAGCCTCTCTTATGATGACGTGACTGAGATCTACGGTGT
GACCAGCTTTAAGCAGTACTGGTCTGTTCGTCGGGTGCACCGTACCACGG
GCACGGTTGATGTTACCACCCACTTTCAGCGCTGGAAGGAGCTGGGTTTG
GATCCTGGGAGCCCCATATTCCAGATGGTGACGCTGGAAGGCTTCGAGGG
CAAGGGTTCTTTGAGCTTCACCGTGGAATGA
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Coding sequence (CDS) from alignment at MCQH01000067:109063..109893-

>ATCC10864_003570-T1 ID=ATCC10864_003570-T1|Name=ATCC10864_003570-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1506bp|location=Sequence derived from alignment at MCQH01000067:109063..109893- (Aspergillus niger ATCC 10864)
TTCTCTGACCTGGTCAGGCGATTTTACTGCCGATGGAGACTATACACTCG
CTATCTACGGCTGGACCCTGGATCCGGTGACTGAGTGGTATATAGTCGAG
TCCTATGGCACAGGCACCCCGGGCAATGGGGACATCCTCGGTCAAGTAGA
GAGTGATGGGGGTGTGTATGATGTCTATAGCCTCTCTTATGATGACGTGA
CTGAGATCTACGGTGTGACCAGCTTTAAGCAGTACTGGTCTGTTCGTCGG
GTGCACCGTACCACGGGCACGGTTGATGTTACCACCCACTTTCAGCGCTG
GAAGGAGCTGGGTTTGGATCCTGGGAGCCCCATATTCCAGATGGTGACGC
TGGAAGGCTTCGAGGGCAAGGGTTCTTTGAGCTTCACCGTGGAATGAATG
CCGTCCGCTATTCGCCTGGCAGCTCTTTCACCCATCTTCGCGGCGTTGAT
TGCTCCTGTCGTTGGTCAATCAATTGCTCCGCAGGTCAAATCACCTGAGT
TCTTCCAATACATTCGGAGTCTGGGCAATGTCACTGAAAGCCACAGCCCT
GGAGATCTCAAGCGGTCTACCACGTATACTACCAGTACATCGGGTGTGGA
TTCTGCTGGTTACTATTACTCCCTGTACAATGACAACGGCGCCGACGCTG
AGTATACCGAGGATTCCTCTTCGGGCAAGTTCTCCCTTAGCTGGGAGTTG
TCAACTGATACGGAATTCCTCGGTGGCAAGGGATACAAAGATACGAGTAC
TCGTTCTCTGACCTGGTCAGGCGATTTTACTGCCGATGGAGACTATACAC
TCGCTATCTACGGCTGGACCCTGGATCCGGTGACTGAGTGGTATATAGTC
GAGTCCTATGGCACAGGCACCCCGGGCAATGGGGACATCCTCGGTCAAGT
AGAGAGTGATGGGGGTGTGTATGATGTCTATAGCCTCTCTTATGATGACG
TGACTGAGATCTACGGTGTGACCAGCTTTAAGCAGTACTGGTCTGTTCGT
CGGGTGCACCGTACCACGGGCACGGTTGATGTTACCACCCACTTTCAGCG
CTGGAAGGAGCTGGGTTTGGATCCTGGGAGCCCCATATTCCAGATGGTGA
CGCTGGAAGGCTTCGAGGGCAAGGGTTCTTTGAGCTTCACCGTGGAATGA
ATGCCGTCCGCTATTCGCCTGGCAGCTCTTTCACCCATCTTCGCGGCGTT
GATTGCTCCTGTCGTTGGTCAATCAATTGCTCCGCAGGTCAAATCACCTG
AGTTCTTCCAATACATTCGGAGTCTGGGCAATGTCACTGAAAGCCACAGC
CCTGGAGATCTCAAGCGGTCTACCACGTATACTACCAGTACATCGGGTGT
GGATTCTGCTGGTTACTATTACTCCCTGTACAATGACAACGGCGCCGACG
CTGAGTATACCGAGGATTCCTCTTCGGGCAAGTTCTCCCTTAGCTGGGAG
TTGTCAACTGATACGGAATTCCTCGGTGGCAAGGGATACAAAGATACGAG
TACTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003570ATCC10864_003570Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003570-T1ATCC10864_003570-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003570-T1.cdsATCC10864_003570-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003570-T1.exon2ATCC10864_003570-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003570-T1.exon1ATCC10864_003570-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013319
PFAMPF00457
InterProIPR013320
InterProIPR033123
InterProIPR001137
Properties
Property NameValue
NoteCAZy:GH11
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000067supercontigMCQH01000067:109063..109893 -
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