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ATCC10864_003648-T1, ATCC10864_003648-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003648-T1
Unique NameATCC10864_003648-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:195509..196332+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003648-T1 ID=ATCC10864_003648-T1|Name=ATCC10864_003648-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=824bp|location=Sequence derived from alignment at MCQH01000068:195509..196332+ (Aspergillus niger ATCC 10864)
ATGGCGAACAACAGACTCCAATACGTGAGTATAATTGAATCTCTGAATAT
TAAATGAAATGGAATACTGATCTATTGTTCTTTTTCTCTGCAGCGCCGCC
GGAACCCGTACGTTTGAATTTTCCCTCTGTTTCTACCCCCATCGTGCCTT
TGTCACTCCCACCAAAATTTTTGTTATCGGTCGCTACGGTGCAATAACGA
TTTGTCCGATTTCGACGCGATGAACCGCTGCTTTGCTCTTGAAATTTTAT
ATACGCCGAGATATCTATGAATAGGGTATTGATGGATTTTGTTCTTCAGG
TACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGA
GCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTG
ACTGTGGCATCAAGCTCCCTGGTGTGAGTGCTCCCGAATGATTCATGTTG
AATGGTGGTGGTGTGTGAACGGGCTGCAGGATGGATGAAGGGTGGAGTGT
GTGTGCGTGGGCGATCGCTTCGACCAACGCACAAGGAAACGACAATATTC
AACACCACCACCACCATTCGCGATACAAAGGATAGGAAGGAAGAGCAAAA
AATGGCTGATGGTCATCTTTCCACCGATATAGGTCCCCGCCCTCCGCCCC
CGCGAGTACGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTA
CGGTGGTTCCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTT
TCCTGATTGAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAG
GAGAAGGCTGCCGGCAAGCGCTAA
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Coding sequence (CDS) from alignment at MCQH01000068:195509..196332+

>ATCC10864_003648-T1 ID=ATCC10864_003648-T1|Name=ATCC10864_003648-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1416bp|location=Sequence derived from alignment at MCQH01000068:195509..196332+ (Aspergillus niger ATCC 10864)
ATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACACGCG
GTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGTTACC
TTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGGCATC
AAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGATCTC
CCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGCGCTG
GTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCAGAAG
ATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCAAGCG
CTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACA
CGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGT
TACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGG
CATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGA
TCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGC
GCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCA
GAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCA
AGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTAC
AACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCT
CCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACT
GTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCT
CAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCG
CTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGG
AGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCC
GGCAAGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCC
GTACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTG
AGCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGT
GACTGTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTA
CGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTT
CCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATT
GAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGC
TGCCGGCAAGCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL34BATCC10864_003648Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003648-T1.exon1ATCC10864_003648-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003648-T1.exon2ATCC10864_003648-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003648-T1.exon3ATCC10864_003648-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003648-T1.exon4ATCC10864_003648-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003648-T1.cdsATCC10864_003648-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003648-T1ATCC10864_003648-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008195
InterProIPR018065
PFAMPF01199
Properties
Property NameValue
Product60S ribosomal protein L34B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:195509..196332 +
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